EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSXETG00000021887 (Gene tree)
Gene ID: -
Gene Symbol: larp6-like.1
Alias: -
Full Name: Xenopus tropicalis acheron (larp6-like.1)%2C mRNA.
Gene Type: protein_coding
Species: Xenopus_tropicalis
Status: putative
Strand: Plus strand
Length: 25582 bases
Position: chrGL173022.1:388283-413864
Accession: NM_001079168
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSXETP00000047368	La	PF05383.17	4e-20	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSXETT00000047368	-	3239	-	ENSXETP00000047368	481 (aa)	-	Q0IHM0

Gene Model

Click here to download ENSXETG00000021887's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSXETG00000021887's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSXETG00000021887	larp6-like.1	92	39.825	ENSXETG00000020340	larp6	88	40.000

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSXETG00000021887	larp6-like.1	89	48.380	ENSAPLG00000004633	-	100	48.380	Anas_platyrhynchos
ENSXETG00000021887	larp6-like.1	84	50.356	ENSACAG00000016739	-	100	49.043	Anolis_carolinensis
ENSXETG00000021887	larp6-like.1	89	57.442	ENSCPBG00000011144	-	92	57.442	Chrysemys_picta_bellii
ENSXETG00000021887	larp6-like.1	82	39.659	ENSELUG00000018609	-	85	39.659	Esox_lucius
ENSXETG00000021887	larp6-like.1	97	44.754	ENSGALG00000044970	LARP6L	95	43.844	Gallus_gallus
ENSXETG00000021887	larp6-like.1	89	56.512	ENSGAGG00000005511	-	97	56.512	Gopherus_agassizii
ENSXETG00000021887	larp6-like.1	96	48.542	ENSLACG00000014893	-	96	48.542	Latimeria_chalumnae
ENSXETG00000021887	larp6-like.1	99	45.073	ENSMGAG00000001563	-	99	43.606	Meleagris_gallopavo
ENSXETG00000021887	larp6-like.1	88	43.224	ENSPNAG00000008072	-	94	44.393	Pygocentrus_nattereri