EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSXETG00000021890 (Gene tree)
Gene ID: -
Gene Symbol: rab11b.2
Alias: -
Full Name: Xenopus tropicalis RAB11B%2C member RAS oncogene family%2C gene 2 (rab11b.2)%2C mRNA.
Gene Type: protein_coding
Species: Xenopus_tropicalis
Status: putative
Strand: Minus strand
Length: 13469 bases
Position: chrGL173022.1:333156-346624
Accession: NM_001004880
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSXETP00000047377	MMR_HSR1	PF01926.23	2.1e-07	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSXETT00000047377	-	1010	-	ENSXETP00000047377	220 (aa)	-	F6Z499

Gene Model

Click here to download ENSXETG00000021890's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSXETG00000021890's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSXETG00000021890	rab11b.2	78	45.977	ENSXETG00000032443	RAB39B	82	45.977
ENSXETG00000021890	rab11b.2	68	34.667	ENSXETG00000006040	hras	85	35.802
ENSXETG00000021890	rab11b.2	94	41.748	ENSXETG00000002305	rab5a	90	41.748
ENSXETG00000021890	rab11b.2	71	36.306	ENSXETG00000030938	rab41	74	36.306
ENSXETG00000021890	rab11b.2	68	33.333	ENSXETG00000014935	ralb	86	34.568
ENSXETG00000021890	rab11b.2	71	36.306	ENSXETG00000023200	rab6a	83	36.306
ENSXETG00000021890	rab11b.2	84	39.362	ENSXETG00000020622	rab39a	89	39.362
ENSXETG00000021890	rab11b.2	74	32.727	ENSXETG00000022517	rerg	81	32.727
ENSXETG00000021890	rab11b.2	65	35.417	ENSXETG00000004449	rab23	68	34.969
ENSXETG00000021890	rab11b.2	80	44.571	ENSXETG00000002201	rab15	82	44.571
ENSXETG00000021890	rab11b.2	69	34.211	ENSXETG00000021449	nras	85	35.366
ENSXETG00000021890	rab11b.2	76	38.150	ENSXETG00000018133	rab9b	86	38.150
ENSXETG00000021890	rab11b.2	68	36.000	ENSXETG00000003398	kras	86	37.037
ENSXETG00000021890	rab11b.2	99	58.667	ENSXETG00000020404	rab25	100	58.667
ENSXETG00000021890	rab11b.2	78	53.801	ENSXETG00000017184	rab2b	80	53.801
ENSXETG00000021890	rab11b.2	61	42.222	ENSXETG00000020729	rab13	84	42.222
ENSXETG00000021890	rab11b.2	95	40.476	ENSXETG00000013633	rab30	97	40.476
ENSXETG00000021890	rab11b.2	70	34.177	ENSXETG00000005944	rab7b	78	34.177
ENSXETG00000021890	rab11b.2	92	47.030	ENSXETG00000014011	rab1a	95	48.485
ENSXETG00000021890	rab11b.2	99	88.073	ENSXETG00000006639	rab11a	100	88.073
ENSXETG00000021890	rab11b.2	82	36.757	ENSXETG00000013345	rab9a	90	36.757
ENSXETG00000021890	rab11b.2	74	32.927	ENSXETG00000005505	MRAS	82	34.659
ENSXETG00000021890	rab11b.2	95	43.062	ENSXETG00000026943	rab35	99	43.062
ENSXETG00000021890	rab11b.2	75	42.515	ENSXETG00000004289	rab12	66	38.679
ENSXETG00000021890	rab11b.2	71	37.107	ENSXETG00000015712	rabl2b	68	37.107
ENSXETG00000021890	rab11b.2	70	34.615	ENSXETG00000019257	rab34	60	34.615
ENSXETG00000021890	rab11b.2	83	38.830	ENSXETG00000018183	rab33a	86	38.830
ENSXETG00000021890	rab11b.2	87	36.082	ENSXETG00000016920	rab33b	82	36.082
ENSXETG00000021890	rab11b.2	72	39.877	ENSXETG00000016176	rab7a	78	39.877
ENSXETG00000021890	rab11b.2	53	37.607	ENSXETG00000031363	-	55	37.607
ENSXETG00000021890	rab11b.2	73	46.914	ENSXETG00000004556	rab18	78	46.914
ENSXETG00000021890	rab11b.2	85	36.170	ENSXETG00000008055	rab3b	90	35.714
ENSXETG00000021890	rab11b.2	100	94.118	ENSXETG00000025484	rab11b.1	100	94.118
ENSXETG00000021890	rab11b.2	74	30.357	ENSXETG00000007760	rap2b	96	32.222
ENSXETG00000021890	rab11b.2	70	36.306	ENSXETG00000014257	mgc75872	79	35.669
ENSXETG00000021890	rab11b.2	79	45.402	ENSXETG00000011370	rab35	86	45.402
ENSXETG00000021890	rab11b.2	57	31.008	ENSXETG00000010915	arl4c	65	31.008

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSXETG00000021890	rab11b.2	99	95.413	ENSG00000185236	RAB11B	100	97.826	Homo_sapiens
ENSXETG00000021890	rab11b.2	98	94.064	ENSAMEG00000004955	RAB11B	99	94.064	Ailuropoda_melanoleuca
ENSXETG00000021890	rab11b.2	82	92.265	ENSACIG00000024374	rab11ba	74	92.265	Amphilophus_citrinellus
ENSXETG00000021890	rab11b.2	99	93.119	ENSAOCG00000018050	rab11ba	100	93.119	Amphiprion_ocellaris
ENSXETG00000021890	rab11b.2	99	92.661	ENSAPEG00000009177	rab11ba	100	92.661	Amphiprion_percula
ENSXETG00000021890	rab11b.2	99	94.954	ENSATEG00000023730	rab11ba	100	94.954	Anabas_testudineus
ENSXETG00000021890	rab11b.2	99	95.413	ENSANAG00000037616	RAB11B	100	95.413	Aotus_nancymaae
ENSXETG00000021890	rab11b.2	99	83.410	ENSACLG00000018852	-	97	83.410	Astatotilapia_calliptera
ENSXETG00000021890	rab11b.2	99	93.578	ENSACLG00000005420	rab11ba	100	93.578	Astatotilapia_calliptera
ENSXETG00000021890	rab11b.2	98	79.630	WBGene00004274	rab-11.1	99	79.630	Caenorhabditis_elegans
ENSXETG00000021890	rab11b.2	99	95.413	ENSCJAG00000010778	RAB11B	100	95.413	Callithrix_jacchus
ENSXETG00000021890	rab11b.2	99	95.413	ENSCAFG00000032060	RAB11B	100	95.413	Canis_familiaris
ENSXETG00000021890	rab11b.2	99	95.413	ENSCAFG00020022184	RAB11B	100	95.413	Canis_lupus_dingo
ENSXETG00000021890	rab11b.2	99	95.413	ENSTSYG00000014758	RAB11B	100	95.413	Carlito_syrichta
ENSXETG00000021890	rab11b.2	99	95.413	ENSCPOG00000030154	RAB11B	100	95.413	Cavia_porcellus
ENSXETG00000021890	rab11b.2	99	95.413	ENSCCAG00000031042	RAB11B	100	95.413	Cebus_capucinus
ENSXETG00000021890	rab11b.2	99	95.413	ENSCLAG00000003207	RAB11B	100	95.413	Chinchilla_lanigera
ENSXETG00000021890	rab11b.2	99	95.413	ENSCSAG00000008024	RAB11B	100	95.413	Chlorocebus_sabaeus
ENSXETG00000021890	rab11b.2	99	81.193	ENSCHOG00000013525	RAB11B	100	81.193	Choloepus_hoffmanni
ENSXETG00000021890	rab11b.2	99	83.486	ENSCING00000009526	-	100	83.486	Ciona_intestinalis
ENSXETG00000021890	rab11b.2	99	95.413	ENSCANG00000040517	RAB11B	100	95.413	Colobus_angolensis_palliatus
ENSXETG00000021890	rab11b.2	99	95.413	ENSCGRG00001013827	Rab11b	100	95.413	Cricetulus_griseus_chok1gshd
ENSXETG00000021890	rab11b.2	99	95.413	ENSCGRG00000010967	Rab11b	100	95.413	Cricetulus_griseus_crigri
ENSXETG00000021890	rab11b.2	99	93.119	ENSCSEG00000007121	rab11ba	84	93.119	Cynoglossus_semilaevis
ENSXETG00000021890	rab11b.2	99	94.037	ENSDARG00000041878	rab11ba	100	94.037	Danio_rerio
ENSXETG00000021890	rab11b.2	99	93.578	ENSDNOG00000004134	-	100	93.578	Dasypus_novemcinctus
ENSXETG00000021890	rab11b.2	100	95.000	ENSDNOG00000014618	RAB11B	98	95.000	Dasypus_novemcinctus
ENSXETG00000021890	rab11b.2	99	95.413	ENSDORG00000006304	Rab11b	100	95.413	Dipodomys_ordii
ENSXETG00000021890	rab11b.2	99	91.284	ENSEBUG00000011775	rab11ba	99	91.220	Eptatretus_burgeri
ENSXETG00000021890	rab11b.2	99	79.817	ENSEBUG00000015447	-	100	79.817	Eptatretus_burgeri
ENSXETG00000021890	rab11b.2	65	99.301	ENSEEUG00000009165	-	100	99.301	Erinaceus_europaeus
ENSXETG00000021890	rab11b.2	88	91.753	ENSELUG00000019240	-	99	91.753	Esox_lucius
ENSXETG00000021890	rab11b.2	99	95.413	ENSFCAG00000015216	RAB11B	100	95.413	Felis_catus
ENSXETG00000021890	rab11b.2	99	95.413	ENSFDAG00000019872	RAB11B	100	95.413	Fukomys_damarensis
ENSXETG00000021890	rab11b.2	99	93.578	ENSFHEG00000022642	rab11ba	100	93.578	Fundulus_heteroclitus
ENSXETG00000021890	rab11b.2	99	91.284	ENSGMOG00000007390	rab11ba	99	91.284	Gadus_morhua
ENSXETG00000021890	rab11b.2	99	94.037	ENSGAFG00000005679	rab11ba	100	94.037	Gambusia_affinis
ENSXETG00000021890	rab11b.2	99	95.413	ENSGAGG00000012557	-	100	95.413	Gopherus_agassizii
ENSXETG00000021890	rab11b.2	99	95.413	ENSHGLG00000014984	RAB11B	100	95.413	Heterocephalus_glaber_female
ENSXETG00000021890	rab11b.2	99	94.954	ENSHGLG00100003638	RAB11B	100	94.954	Heterocephalus_glaber_male
ENSXETG00000021890	rab11b.2	99	95.413	ENSSTOG00000031571	RAB11B	100	95.413	Ictidomys_tridecemlineatus
ENSXETG00000021890	rab11b.2	99	95.413	ENSJJAG00000018891	Rab11b	100	95.413	Jaculus_jaculus
ENSXETG00000021890	rab11b.2	99	94.495	ENSKMAG00000006082	-	100	94.495	Kryptolebias_marmoratus
ENSXETG00000021890	rab11b.2	99	92.202	ENSLBEG00000006087	rab11ba	100	92.202	Labrus_bergylta
ENSXETG00000021890	rab11b.2	77	99.412	ENSLACG00000016974	RAB11B	99	99.412	Latimeria_chalumnae
ENSXETG00000021890	rab11b.2	99	95.413	ENSLAFG00000013598	RAB11B	100	95.413	Loxodonta_africana
ENSXETG00000021890	rab11b.2	99	95.413	ENSMNEG00000039759	-	100	95.413	Macaca_nemestrina
ENSXETG00000021890	rab11b.2	99	94.037	ENSMAMG00000018556	rab11ba	100	94.037	Mastacembelus_armatus
ENSXETG00000021890	rab11b.2	99	93.578	ENSMZEG00005010947	rab11ba	100	93.578	Maylandia_zebra
ENSXETG00000021890	rab11b.2	99	83.410	ENSMZEG00005019251	-	97	83.410	Maylandia_zebra
ENSXETG00000021890	rab11b.2	99	94.954	ENSMAUG00000021579	Rab11b	100	94.954	Mesocricetus_auratus
ENSXETG00000021890	rab11b.2	99	95.413	ENSMOCG00000012667	Rab11b	100	95.413	Microtus_ochrogaster
ENSXETG00000021890	rab11b.2	99	89.908	ENSMALG00000021949	rab11ba	100	89.908	Monopterus_albus
ENSXETG00000021890	rab11b.2	99	95.413	MGP_CAROLIEiJ_G0021415	Rab11b	97	98.621	Mus_caroli
ENSXETG00000021890	rab11b.2	99	95.413	ENSMUSG00000077450	Rab11b	97	98.621	Mus_musculus
ENSXETG00000021890	rab11b.2	99	95.413	MGP_PahariEiJ_G0020420	Rab11b	100	95.413	Mus_pahari
ENSXETG00000021890	rab11b.2	99	95.413	MGP_SPRETEiJ_G0022327	Rab11b	97	98.621	Mus_spretus
ENSXETG00000021890	rab11b.2	99	95.413	ENSMPUG00000007263	RAB11B	100	95.413	Mustela_putorius_furo
ENSXETG00000021890	rab11b.2	99	90.950	ENSMLUG00000002308	-	100	90.950	Myotis_lucifugus
ENSXETG00000021890	rab11b.2	99	95.413	ENSNGAG00000015757	Rab11b	100	95.413	Nannospalax_galili
ENSXETG00000021890	rab11b.2	99	94.037	ENSNBRG00000023898	rab11ba	84	94.037	Neolamprologus_brichardi
ENSXETG00000021890	rab11b.2	99	95.413	ENSNLEG00000001733	RAB11B	100	95.413	Nomascus_leucogenys
ENSXETG00000021890	rab11b.2	99	95.413	ENSODEG00000011371	RAB11B	100	95.413	Octodon_degus
ENSXETG00000021890	rab11b.2	99	94.495	ENSONIG00000002535	rab11ba	100	94.495	Oreochromis_niloticus
ENSXETG00000021890	rab11b.2	73	96.894	ENSOCUG00000028208	RAB11B	64	96.894	Oryctolagus_cuniculus
ENSXETG00000021890	rab11b.2	99	94.470	ENSORLG00000015307	rab11ba	99	94.470	Oryzias_latipes
ENSXETG00000021890	rab11b.2	99	94.470	ENSORLG00020020816	rab11ba	99	94.470	Oryzias_latipes_hni
ENSXETG00000021890	rab11b.2	98	94.907	ENSORLG00015016946	rab11ba	81	94.907	Oryzias_latipes_hsok
ENSXETG00000021890	rab11b.2	99	94.470	ENSOMEG00000002581	rab11ba	99	94.470	Oryzias_melastigma
ENSXETG00000021890	rab11b.2	100	95.000	ENSOGAG00000003227	RAB11B	100	95.000	Otolemur_garnettii
ENSXETG00000021890	rab11b.2	100	95.000	ENSOARG00000003801	RAB11B	98	95.000	Ovis_aries
ENSXETG00000021890	rab11b.2	82	94.444	ENSPPRG00000010160	RAB11B	88	94.444	Panthera_pardus
ENSXETG00000021890	rab11b.2	99	95.413	ENSPEMG00000014536	Rab11b	100	95.413	Peromyscus_maniculatus_bairdii
ENSXETG00000021890	rab11b.2	93	79.048	ENSPMAG00000009335	-	100	79.048	Petromyzon_marinus
ENSXETG00000021890	rab11b.2	99	94.495	ENSPFOG00000006159	rab11ba	100	94.495	Poecilia_formosa
ENSXETG00000021890	rab11b.2	99	94.495	ENSPLAG00000014243	rab11ba	100	94.495	Poecilia_latipinna
ENSXETG00000021890	rab11b.2	99	94.495	ENSPMEG00000007917	rab11ba	75	94.495	Poecilia_mexicana
ENSXETG00000021890	rab11b.2	99	94.495	ENSPREG00000006357	rab11ba	78	94.495	Poecilia_reticulata
ENSXETG00000021890	rab11b.2	99	95.413	ENSPPYG00000009504	RAB11B	100	95.413	Pongo_abelii
ENSXETG00000021890	rab11b.2	99	86.697	ENSPCAG00000016118	RAB11B	100	86.697	Procavia_capensis
ENSXETG00000021890	rab11b.2	66	97.260	ENSPCOG00000008655	-	100	97.260	Propithecus_coquereli
ENSXETG00000021890	rab11b.2	99	95.413	ENSPCOG00000028053	RAB11B	100	95.413	Propithecus_coquereli
ENSXETG00000021890	rab11b.2	99	95.413	ENSPVAG00000009645	RAB11B	100	95.413	Pteropus_vampyrus
ENSXETG00000021890	rab11b.2	96	75.701	ENSPNYG00000023810	-	95	74.537	Pundamilia_nyererei
ENSXETG00000021890	rab11b.2	99	93.578	ENSPNYG00000019644	rab11ba	100	93.578	Pundamilia_nyererei
ENSXETG00000021890	rab11b.2	99	94.495	ENSPNAG00000020475	rab11ba	100	94.495	Pygocentrus_nattereri
ENSXETG00000021890	rab11b.2	99	94.495	ENSPNAG00000006431	-	100	94.495	Pygocentrus_nattereri
ENSXETG00000021890	rab11b.2	99	95.413	ENSRNOG00000007648	Rab11b	100	95.413	Rattus_norvegicus
ENSXETG00000021890	rab11b.2	99	95.413	ENSSBOG00000035094	RAB11B	100	95.413	Saimiri_boliviensis_boliviensis
ENSXETG00000021890	rab11b.2	99	94.495	ENSSDUG00000002965	rab11ba	100	94.495	Seriola_dumerili
ENSXETG00000021890	rab11b.2	99	94.495	ENSSLDG00000005221	rab11ba	100	94.495	Seriola_lalandi_dorsalis
ENSXETG00000021890	rab11b.2	99	93.578	ENSSPAG00000017313	rab11ba	100	93.578	Stegastes_partitus
ENSXETG00000021890	rab11b.2	99	95.413	ENSSSCG00000013600	RAB11B	100	95.413	Sus_scrofa
ENSXETG00000021890	rab11b.2	59	99.225	ENSTBEG00000014750	-	100	99.225	Tupaia_belangeri
ENSXETG00000021890	rab11b.2	99	95.413	ENSTTRG00000009758	RAB11B	100	95.413	Tursiops_truncatus
ENSXETG00000021890	rab11b.2	85	83.422	ENSUMAG00000014594	RAB11B	89	81.579	Ursus_maritimus
ENSXETG00000021890	rab11b.2	99	95.413	ENSVVUG00000025210	RAB11B	100	95.413	Vulpes_vulpes
ENSXETG00000021890	rab11b.2	60	98.496	ENSXCOG00000009194	-	98	98.496	Xiphophorus_couchianus
ENSXETG00000021890	rab11b.2	99	94.037	ENSXMAG00000013416	rab11ba	100	94.037	Xiphophorus_maculatus