EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Orthologs

Description

Ensembl ID: ENSXETG00000022259 (Gene tree)
Gene ID: -
Gene Symbol: prpf8
Alias: -
Full Name: pre-mRNA processing factor 8
Gene Type: protein_coding
Species: Xenopus_tropicalis
Status: putative
Strand: Plus strand
Length: 19702 bases
Position: chrGL172820.1:1707323-1727024
Accession: XB-GENE-966799
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSXETP00000048189	RRM_4	PF10598.9	2.5e-48	1	1
ENSXETP00000048189	U5_2-snRNA_bdg	PF10597.9	1.3e-72	1	1
ENSXETP00000048189	PRO8NT	PF08082.11	4.2e-87	1	1
ENSXETP00000048189	U6-snRNA_bdg	PF10596.9	1.2e-89	1	1
ENSXETP00000048189	PROCN	PF08083.11	8.9e-236	1	1
ENSXETP00000048189	PRP8_domainIV	PF12134.8	2.6e-130	1	1
ENSXETP00000048189	PROCT	PF08084.11	1.5e-53	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSXETT00000048189	-	7258	XM_002936059	ENSXETP00000048189	2336 (aa)	XP_002936105	F6ZIA0

Gene Model

Click here to download ENSXETG00000022259's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSXETG00000022259's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSXETG00000022259	prpf8	100	98.716	ENSG00000174231	PRPF8	100	98.716	Homo_sapiens
ENSXETG00000022259	prpf8	100	97.691	ENSAPOG00000010079	prpf8	100	97.691	Acanthochromis_polyacanthus
ENSXETG00000022259	prpf8	100	98.716	ENSAMEG00000007940	PRPF8	100	98.716	Ailuropoda_melanoleuca
ENSXETG00000022259	prpf8	99	96.680	ENSACIG00000018280	prpf8	99	96.639	Amphilophus_citrinellus
ENSXETG00000022259	prpf8	100	97.691	ENSAOCG00000010725	prpf8	100	97.691	Amphiprion_ocellaris
ENSXETG00000022259	prpf8	100	97.691	ENSAPEG00000014397	prpf8	100	97.691	Amphiprion_percula
ENSXETG00000022259	prpf8	100	97.093	ENSATEG00000010062	prpf8	100	97.093	Anabas_testudineus
ENSXETG00000022259	prpf8	96	99.022	ENSAPLG00000010357	PRPF8	100	99.022	Anas_platyrhynchos
ENSXETG00000022259	prpf8	83	96.861	ENSACAG00000014784	PRPF8	99	96.861	Anolis_carolinensis
ENSXETG00000022259	prpf8	100	98.716	ENSANAG00000032629	PRPF8	100	98.716	Aotus_nancymaae
ENSXETG00000022259	prpf8	100	97.235	ENSACLG00000020858	prpf8	100	97.235	Astatotilapia_calliptera
ENSXETG00000022259	prpf8	100	97.688	ENSAMXG00000020291	prpf8	100	97.688	Astyanax_mexicanus
ENSXETG00000022259	prpf8	100	98.716	ENSBTAG00000011488	PRPF8	100	98.716	Bos_taurus
ENSXETG00000022259	prpf8	99	86.420	WBGene00004187	prp-8	99	86.644	Caenorhabditis_elegans
ENSXETG00000022259	prpf8	100	98.716	ENSCJAG00000001911	PRPF8	100	98.716	Callithrix_jacchus
ENSXETG00000022259	prpf8	100	98.716	ENSCAFG00000019221	PRPF8	100	98.716	Canis_familiaris
ENSXETG00000022259	prpf8	96	99.108	ENSCAFG00020009943	PRPF8	100	99.108	Canis_lupus_dingo
ENSXETG00000022259	prpf8	100	98.716	ENSCHIG00000017499	PRPF8	100	98.716	Capra_hircus
ENSXETG00000022259	prpf8	100	98.716	ENSTSYG00000014120	PRPF8	100	98.716	Carlito_syrichta
ENSXETG00000022259	prpf8	96	96.883	ENSCAPG00000009459	PRPF8	99	96.883	Cavia_aperea
ENSXETG00000022259	prpf8	100	98.716	ENSCPOG00000010379	PRPF8	100	98.716	Cavia_porcellus
ENSXETG00000022259	prpf8	100	98.716	ENSCCAG00000031983	-	100	98.716	Cebus_capucinus
ENSXETG00000022259	prpf8	100	98.716	ENSCATG00000038595	PRPF8	100	98.716	Cercocebus_atys
ENSXETG00000022259	prpf8	100	98.716	ENSCLAG00000004388	PRPF8	100	98.716	Chinchilla_lanigera
ENSXETG00000022259	prpf8	100	98.716	ENSCSAG00000013929	PRPF8	100	98.716	Chlorocebus_sabaeus
ENSXETG00000022259	prpf8	81	98.000	ENSCHOG00000008590	PRPF8	88	98.000	Choloepus_hoffmanni
ENSXETG00000022259	prpf8	100	98.673	ENSCPBG00000020409	PRPF8	100	98.673	Chrysemys_picta_bellii
ENSXETG00000022259	prpf8	99	92.874	ENSCSAVG00000007825	-	100	91.112	Ciona_savignyi
ENSXETG00000022259	prpf8	100	98.716	ENSCANG00000043088	PRPF8	100	98.716	Colobus_angolensis_palliatus
ENSXETG00000022259	prpf8	74	99.018	ENSCGRG00000005129	Prpf8	100	99.018	Cricetulus_griseus_crigri
ENSXETG00000022259	prpf8	100	97.607	ENSCSEG00000007905	prpf8	100	97.607	Cynoglossus_semilaevis
ENSXETG00000022259	prpf8	100	97.525	ENSDARG00000026180	prpf8	100	97.525	Danio_rerio
ENSXETG00000022259	prpf8	93	98.757	ENSDNOG00000018471	PRPF8	99	98.757	Dasypus_novemcinctus
ENSXETG00000022259	prpf8	84	97.801	ENSDORG00000006185	Prpf8	96	97.801	Dipodomys_ordii
ENSXETG00000022259	prpf8	99	91.345	FBgn0033688	Prp8	97	91.843	Drosophila_melanogaster
ENSXETG00000022259	prpf8	100	93.493	ENSETEG00000017592	PRPF8	100	93.493	Echinops_telfairi
ENSXETG00000022259	prpf8	99	93.777	ENSEBUG00000006548	prpf8	99	93.777	Eptatretus_burgeri
ENSXETG00000022259	prpf8	100	98.716	ENSEASG00005009514	PRPF8	100	98.716	Equus_asinus_asinus
ENSXETG00000022259	prpf8	97	99.121	ENSECAG00000021318	PRPF8	100	99.121	Equus_caballus
ENSXETG00000022259	prpf8	67	100.000	ENSEEUG00000012120	-	67	100.000	Erinaceus_europaeus
ENSXETG00000022259	prpf8	98	96.549	ENSELUG00000007120	prpf8	99	96.549	Esox_lucius
ENSXETG00000022259	prpf8	100	98.716	ENSFCAG00000006297	PRPF8	100	98.716	Felis_catus
ENSXETG00000022259	prpf8	100	98.673	ENSFALG00000006628	PRPF8	100	98.673	Ficedula_albicollis
ENSXETG00000022259	prpf8	100	98.716	ENSFDAG00000004711	PRPF8	100	98.716	Fukomys_damarensis
ENSXETG00000022259	prpf8	100	97.055	ENSFHEG00000021084	prpf8	100	97.055	Fundulus_heteroclitus
ENSXETG00000022259	prpf8	100	95.349	ENSGMOG00000002028	prpf8	99	95.349	Gadus_morhua
ENSXETG00000022259	prpf8	100	98.673	ENSGALG00000002943	PRPF8	100	98.673	Gallus_gallus
ENSXETG00000022259	prpf8	99	97.472	ENSGAFG00000010337	prpf8	99	97.472	Gambusia_affinis
ENSXETG00000022259	prpf8	100	97.560	ENSGACG00000008504	prpf8	100	97.560	Gasterosteus_aculeatus
ENSXETG00000022259	prpf8	100	98.716	ENSGAGG00000008350	PRPF8	100	98.716	Gopherus_agassizii
ENSXETG00000022259	prpf8	100	98.716	ENSGGOG00000005516	PRPF8	100	98.716	Gorilla_gorilla
ENSXETG00000022259	prpf8	100	97.605	ENSHBUG00000016192	prpf8	100	97.605	Haplochromis_burtoni
ENSXETG00000022259	prpf8	100	98.716	ENSHGLG00000012029	PRPF8	100	98.716	Heterocephalus_glaber_female
ENSXETG00000022259	prpf8	100	98.716	ENSHGLG00100016494	PRPF8	100	98.716	Heterocephalus_glaber_male
ENSXETG00000022259	prpf8	100	97.393	ENSHCOG00000016414	prpf8	100	97.393	Hippocampus_comes
ENSXETG00000022259	prpf8	100	97.563	ENSIPUG00000023230	prpf8	100	97.563	Ictalurus_punctatus
ENSXETG00000022259	prpf8	100	98.716	ENSSTOG00000005128	PRPF8	100	98.716	Ictidomys_tridecemlineatus
ENSXETG00000022259	prpf8	100	96.618	ENSJJAG00000021159	Prpf8	100	96.618	Jaculus_jaculus
ENSXETG00000022259	prpf8	99	97.852	ENSKMAG00000016118	prpf8	99	97.852	Kryptolebias_marmoratus
ENSXETG00000022259	prpf8	100	97.392	ENSLBEG00000026903	prpf8	100	97.392	Labrus_bergylta
ENSXETG00000022259	prpf8	95	95.758	ENSLACG00000010479	PRPF8	99	98.455	Latimeria_chalumnae
ENSXETG00000022259	prpf8	99	97.818	ENSLOCG00000005409	prpf8	99	97.818	Lepisosteus_oculatus
ENSXETG00000022259	prpf8	100	98.716	ENSLAFG00000015445	PRPF8	100	98.716	Loxodonta_africana
ENSXETG00000022259	prpf8	100	98.716	ENSMFAG00000039995	PRPF8	100	98.716	Macaca_fascicularis
ENSXETG00000022259	prpf8	100	98.716	ENSMMUG00000004820	PRPF8	100	98.716	Macaca_mulatta
ENSXETG00000022259	prpf8	100	98.716	ENSMNEG00000035713	PRPF8	100	98.716	Macaca_nemestrina
ENSXETG00000022259	prpf8	100	98.716	ENSMLEG00000037937	PRPF8	100	98.716	Mandrillus_leucophaeus
ENSXETG00000022259	prpf8	100	97.520	ENSMAMG00000008919	prpf8	100	97.520	Mastacembelus_armatus
ENSXETG00000022259	prpf8	100	97.235	ENSMZEG00005015073	prpf8	100	97.235	Maylandia_zebra
ENSXETG00000022259	prpf8	100	98.673	ENSMGAG00000004769	PRPF8	100	98.673	Meleagris_gallopavo
ENSXETG00000022259	prpf8	100	98.759	ENSMICG00000010320	PRPF8	100	98.759	Microcebus_murinus
ENSXETG00000022259	prpf8	100	98.759	ENSMOCG00000016838	Prpf8	100	98.759	Microtus_ochrogaster
ENSXETG00000022259	prpf8	100	97.136	ENSMMOG00000011887	prpf8	100	97.136	Mola_mola
ENSXETG00000022259	prpf8	100	98.759	ENSMODG00000010480	PRPF8	100	98.759	Monodelphis_domestica
ENSXETG00000022259	prpf8	97	97.166	ENSMALG00000003558	prpf8	100	97.166	Monopterus_albus
ENSXETG00000022259	prpf8	100	98.801	MGP_CAROLIEiJ_G0016740	Prpf8	100	98.801	Mus_caroli
ENSXETG00000022259	prpf8	100	98.801	ENSMUSG00000020850	Prpf8	100	98.801	Mus_musculus
ENSXETG00000022259	prpf8	100	98.801	MGP_PahariEiJ_G0017877	Prpf8	100	98.801	Mus_pahari
ENSXETG00000022259	prpf8	100	98.801	MGP_SPRETEiJ_G0017583	Prpf8	100	98.801	Mus_spretus
ENSXETG00000022259	prpf8	100	98.716	ENSMPUG00000013227	PRPF8	100	98.716	Mustela_putorius_furo
ENSXETG00000022259	prpf8	100	98.546	ENSMLUG00000002666	PRPF8	100	98.546	Myotis_lucifugus
ENSXETG00000022259	prpf8	100	97.003	ENSNGAG00000005305	Prpf8	100	97.003	Nannospalax_galili
ENSXETG00000022259	prpf8	100	97.278	ENSNBRG00000013127	prpf8	100	97.278	Neolamprologus_brichardi
ENSXETG00000022259	prpf8	97	96.887	ENSNLEG00000000897	PRPF8	98	96.887	Nomascus_leucogenys
ENSXETG00000022259	prpf8	99	97.350	ENSMEUG00000015999	PRPF8	100	97.350	Notamacropus_eugenii
ENSXETG00000022259	prpf8	100	97.003	ENSOPRG00000003102	PRPF8	100	97.003	Ochotona_princeps
ENSXETG00000022259	prpf8	100	98.716	ENSODEG00000008468	PRPF8	100	98.716	Octodon_degus
ENSXETG00000022259	prpf8	100	97.150	ENSONIG00000008153	prpf8	100	97.150	Oreochromis_niloticus
ENSXETG00000022259	prpf8	82	99.346	ENSOANG00000004250	PRPF8	97	99.346	Ornithorhynchus_anatinus
ENSXETG00000022259	prpf8	100	98.716	ENSOCUG00000000081	PRPF8	100	98.716	Oryctolagus_cuniculus
ENSXETG00000022259	prpf8	99	97.637	ENSORLG00000008036	prpf8	99	97.637	Oryzias_latipes
ENSXETG00000022259	prpf8	99	97.596	ENSORLG00020021070	prpf8	99	97.596	Oryzias_latipes_hni
ENSXETG00000022259	prpf8	99	97.637	ENSORLG00015002340	prpf8	99	97.637	Oryzias_latipes_hsok
ENSXETG00000022259	prpf8	99	96.048	ENSOMEG00000016866	prpf8	99	96.048	Oryzias_melastigma
ENSXETG00000022259	prpf8	100	98.589	ENSOARG00000013312	PRPF8	100	98.589	Ovis_aries
ENSXETG00000022259	prpf8	100	98.716	ENSPPAG00000042753	PRPF8	100	98.716	Pan_paniscus
ENSXETG00000022259	prpf8	100	98.716	ENSPPRG00000008746	PRPF8	100	98.716	Panthera_pardus
ENSXETG00000022259	prpf8	100	98.630	ENSPTIG00000019200	PRPF8	100	98.630	Panthera_tigris_altaica
ENSXETG00000022259	prpf8	100	98.716	ENSPTRG00000039576	PRPF8	100	98.716	Pan_troglodytes
ENSXETG00000022259	prpf8	99	99.088	ENSPANG00000024607	PRPF8	98	99.088	Papio_anubis
ENSXETG00000022259	prpf8	100	97.529	ENSPKIG00000011201	prpf8	100	97.529	Paramormyrops_kingsleyae
ENSXETG00000022259	prpf8	100	98.630	ENSPSIG00000013393	PRPF8	100	98.630	Pelodiscus_sinensis
ENSXETG00000022259	prpf8	100	98.759	ENSPEMG00000021699	Prpf8	100	98.759	Peromyscus_maniculatus_bairdii
ENSXETG00000022259	prpf8	96	93.722	ENSPMAG00000005438	prpf8	100	93.767	Petromyzon_marinus
ENSXETG00000022259	prpf8	100	98.759	ENSPCIG00000022603	PRPF8	100	99.153	Phascolarctos_cinereus
ENSXETG00000022259	prpf8	100	96.694	ENSPFOG00000007005	prpf8	100	96.694	Poecilia_formosa
ENSXETG00000022259	prpf8	100	96.190	ENSPLAG00000020777	prpf8	100	96.190	Poecilia_latipinna
ENSXETG00000022259	prpf8	100	96.694	ENSPMEG00000004051	prpf8	100	96.694	Poecilia_mexicana
ENSXETG00000022259	prpf8	100	97.517	ENSPREG00000021902	prpf8	100	97.517	Poecilia_reticulata
ENSXETG00000022259	prpf8	100	98.716	ENSPPYG00000007777	PRPF8	100	98.716	Pongo_abelii
ENSXETG00000022259	prpf8	90	98.020	ENSPCAG00000008938	PRPF8	90	98.020	Procavia_capensis
ENSXETG00000022259	prpf8	100	98.759	ENSPCOG00000015182	PRPF8	100	98.759	Propithecus_coquereli
ENSXETG00000022259	prpf8	93	98.892	ENSPVAG00000002134	PRPF8	93	98.892	Pteropus_vampyrus
ENSXETG00000022259	prpf8	100	97.605	ENSPNYG00000016356	prpf8	100	97.605	Pundamilia_nyererei
ENSXETG00000022259	prpf8	100	97.563	ENSPNAG00000009247	prpf8	100	97.563	Pygocentrus_nattereri
ENSXETG00000022259	prpf8	100	98.801	ENSRNOG00000003495	Prpf8	100	98.801	Rattus_norvegicus
ENSXETG00000022259	prpf8	100	98.716	ENSRBIG00000031219	PRPF8	100	98.716	Rhinopithecus_bieti
ENSXETG00000022259	prpf8	100	98.716	ENSRROG00000038014	PRPF8	100	98.716	Rhinopithecus_roxellana
ENSXETG00000022259	prpf8	99	62.446	YHR165C	PRP8	95	62.543	Saccharomyces_cerevisiae
ENSXETG00000022259	prpf8	100	98.716	ENSSBOG00000029717	PRPF8	100	98.716	Saimiri_boliviensis_boliviensis
ENSXETG00000022259	prpf8	100	98.716	ENSSHAG00000006167	PRPF8	100	98.716	Sarcophilus_harrisii
ENSXETG00000022259	prpf8	100	97.439	ENSSFOG00015013905	prpf8	100	97.439	Scleropages_formosus
ENSXETG00000022259	prpf8	100	97.606	ENSSMAG00000017736	prpf8	100	97.606	Scophthalmus_maximus
ENSXETG00000022259	prpf8	100	97.649	ENSSDUG00000003029	prpf8	100	97.649	Seriola_dumerili
ENSXETG00000022259	prpf8	68	98.624	ENSSLDG00000017096	prpf8	100	98.624	Seriola_lalandi_dorsalis
ENSXETG00000022259	prpf8	87	96.823	ENSSARG00000002892	PRPF8	87	96.823	Sorex_araneus
ENSXETG00000022259	prpf8	100	98.459	ENSSPUG00000007463	PRPF8	100	98.459	Sphenodon_punctatus
ENSXETG00000022259	prpf8	100	97.093	ENSSPAG00000015639	prpf8	100	97.093	Stegastes_partitus
ENSXETG00000022259	prpf8	100	98.716	ENSSSCG00000017817	PRPF8	100	98.716	Sus_scrofa
ENSXETG00000022259	prpf8	100	98.673	ENSTGUG00000005648	-	100	98.673	Taeniopygia_guttata
ENSXETG00000022259	prpf8	52	98.780	ENSTGUG00000015597	-	95	98.780	Taeniopygia_guttata
ENSXETG00000022259	prpf8	100	97.392	ENSTRUG00000015906	prpf8	100	97.392	Takifugu_rubripes
ENSXETG00000022259	prpf8	95	98.567	ENSTNIG00000003460	prpf8	99	98.567	Tetraodon_nigroviridis
ENSXETG00000022259	prpf8	93	99.252	ENSTBEG00000006431	PRPF8	93	99.252	Tupaia_belangeri
ENSXETG00000022259	prpf8	100	98.159	ENSTTRG00000006869	PRPF8	100	98.159	Tursiops_truncatus
ENSXETG00000022259	prpf8	54	98.173	ENSUAMG00000015644	-	96	98.173	Ursus_americanus
ENSXETG00000022259	prpf8	100	98.459	ENSUMAG00000009385	PRPF8	100	98.459	Ursus_maritimus
ENSXETG00000022259	prpf8	71	99.310	ENSVPAG00000006063	-	71	99.310	Vicugna_pacos
ENSXETG00000022259	prpf8	100	98.716	ENSVVUG00000021695	PRPF8	99	98.716	Vulpes_vulpes
ENSXETG00000022259	prpf8	100	97.310	ENSXCOG00000012775	prpf8	100	97.310	Xiphophorus_couchianus
ENSXETG00000022259	prpf8	100	97.353	ENSXMAG00000008505	prpf8	100	97.353	Xiphophorus_maculatus