EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Orthologs

Description

Ensembl ID: ENSXETG00000022342 (Gene tree)
Gene ID: -
Gene Symbol: nop16
Alias: -
Full Name: Xenopus tropicalis NOP16 nucleolar protein (nop16)%2C mRNA.
Gene Type: protein_coding
Species: Xenopus_tropicalis
Status: putative
Strand: Minus strand
Length: 5799 bases
Position: chrGL172974.1:1163314-1169112
Accession: NM_001102748
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSXETP00000048326	Nop16	PF09420.10	1e-19	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSXETT00000048326	-	1581	-	ENSXETP00000048326	168 (aa)	-	Q6NVB0

Gene Model

Click here to download ENSXETG00000022342's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSXETG00000022342's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSXETG00000022342	nop16	100	50.581	ENSAPOG00000010682	-	98	50.581	Acanthochromis_polyacanthus
ENSXETG00000022342	nop16	95	57.669	ENSAMEG00000006988	-	92	57.669	Ailuropoda_melanoleuca
ENSXETG00000022342	nop16	93	54.777	ENSACIG00000019263	nop16	90	54.777	Amphilophus_citrinellus
ENSXETG00000022342	nop16	100	51.744	ENSAOCG00000005504	nop16	98	51.744	Amphiprion_ocellaris
ENSXETG00000022342	nop16	100	51.744	ENSAPEG00000006605	nop16	98	51.744	Amphiprion_percula
ENSXETG00000022342	nop16	91	53.205	ENSATEG00000014089	nop16	95	51.786	Anabas_testudineus
ENSXETG00000022342	nop16	95	55.828	ENSACAG00000006333	-	92	55.828	Anolis_carolinensis
ENSXETG00000022342	nop16	90	50.968	ENSANAG00000027410	-	87	50.968	Aotus_nancymaae
ENSXETG00000022342	nop16	95	55.828	ENSANAG00000015743	-	92	55.828	Aotus_nancymaae
ENSXETG00000022342	nop16	93	53.503	ENSACLG00000025227	nop16	90	53.503	Astatotilapia_calliptera
ENSXETG00000022342	nop16	92	50.323	ENSAMXG00000006843	nop16	90	50.323	Astyanax_mexicanus
ENSXETG00000022342	nop16	95	57.055	ENSBTAG00000010734	NOP16	92	57.055	Bos_taurus
ENSXETG00000022342	nop16	95	57.669	ENSCAFG00000016694	NOP16	92	57.669	Canis_familiaris
ENSXETG00000022342	nop16	95	57.669	ENSCAFG00020011505	-	87	57.669	Canis_lupus_dingo
ENSXETG00000022342	nop16	95	57.055	ENSCHIG00000022082	-	92	57.055	Capra_hircus
ENSXETG00000022342	nop16	93	58.125	ENSTSYG00000030409	-	92	57.669	Carlito_syrichta
ENSXETG00000022342	nop16	95	47.239	ENSTSYG00000032690	-	91	47.239	Carlito_syrichta
ENSXETG00000022342	nop16	95	58.896	ENSCPOG00000026072	-	92	58.896	Cavia_porcellus
ENSXETG00000022342	nop16	92	52.830	ENSCCAG00000026775	-	98	51.479	Cebus_capucinus
ENSXETG00000022342	nop16	95	58.282	ENSCLAG00000015405	-	92	58.282	Chinchilla_lanigera
ENSXETG00000022342	nop16	95	57.055	ENSCSAG00000009400	-	92	57.055	Chlorocebus_sabaeus
ENSXETG00000022342	nop16	95	53.939	ENSCPBG00000022647	-	92	53.939	Chrysemys_picta_bellii
ENSXETG00000022342	nop16	98	36.000	ENSCING00000006179	-	93	36.000	Ciona_intestinalis
ENSXETG00000022342	nop16	98	38.690	ENSCSAVG00000000269	-	93	38.095	Ciona_savignyi
ENSXETG00000022342	nop16	95	56.442	ENSCGRG00001004259	Nop16	92	56.442	Cricetulus_griseus_chok1gshd
ENSXETG00000022342	nop16	95	56.442	ENSCGRG00000010975	Nop16	92	56.442	Cricetulus_griseus_crigri
ENSXETG00000022342	nop16	98	51.807	ENSCSEG00000020523	nop16	97	51.807	Cynoglossus_semilaevis
ENSXETG00000022342	nop16	98	54.217	ENSCVAG00000020140	nop16	95	54.217	Cyprinodon_variegatus
ENSXETG00000022342	nop16	98	55.758	ENSDARG00000044402	nop16	96	55.758	Danio_rerio
ENSXETG00000022342	nop16	95	56.173	ENSDNOG00000042890	-	92	56.173	Dasypus_novemcinctus
ENSXETG00000022342	nop16	95	57.669	ENSDORG00000008872	Nop16	92	57.669	Dipodomys_ordii
ENSXETG00000022342	nop16	93	41.916	ENSEBUG00000011196	nop16	92	41.916	Eptatretus_burgeri
ENSXETG00000022342	nop16	95	58.896	ENSEASG00005011988	-	92	58.896	Equus_asinus_asinus
ENSXETG00000022342	nop16	95	59.509	ENSECAG00000021354	NOP16	92	59.509	Equus_caballus
ENSXETG00000022342	nop16	98	54.438	ENSELUG00000000401	nop16	95	54.438	Esox_lucius
ENSXETG00000022342	nop16	95	58.896	ENSFCAG00000025473	-	92	58.896	Felis_catus
ENSXETG00000022342	nop16	95	49.390	ENSFALG00000008553	-	92	49.390	Ficedula_albicollis
ENSXETG00000022342	nop16	95	57.055	ENSFDAG00000000193	-	92	57.055	Fukomys_damarensis
ENSXETG00000022342	nop16	98	52.976	ENSFHEG00000016452	nop16	91	53.416	Fundulus_heteroclitus
ENSXETG00000022342	nop16	95	52.727	ENSGALG00000003355	-	92	52.727	Gallus_gallus
ENSXETG00000022342	nop16	97	46.154	ENSGAFG00000011616	nop16	74	51.852	Gambusia_affinis
ENSXETG00000022342	nop16	88	43.791	ENSGACG00000020810	nop16	90	43.791	Gasterosteus_aculeatus
ENSXETG00000022342	nop16	91	50.641	ENSGACG00000003122	-	97	47.788	Gasterosteus_aculeatus
ENSXETG00000022342	nop16	91	50.649	ENSGACG00000002618	-	98	49.398	Gasterosteus_aculeatus
ENSXETG00000022342	nop16	91	48.366	ENSGACG00000020819	-	92	48.366	Gasterosteus_aculeatus
ENSXETG00000022342	nop16	93	54.140	ENSHBUG00000013527	nop16	90	54.140	Haplochromis_burtoni
ENSXETG00000022342	nop16	95	58.282	ENSHGLG00000013437	NOP16	92	58.282	Heterocephalus_glaber_female
ENSXETG00000022342	nop16	95	58.282	ENSHGLG00100011375	NOP16	92	58.282	Heterocephalus_glaber_male
ENSXETG00000022342	nop16	98	53.571	ENSHCOG00000019999	nop16	96	53.571	Hippocampus_comes
ENSXETG00000022342	nop16	98	54.878	ENSIPUG00000006682	nop16	95	54.878	Ictalurus_punctatus
ENSXETG00000022342	nop16	95	57.576	ENSSTOG00000004869	-	92	57.576	Ictidomys_tridecemlineatus
ENSXETG00000022342	nop16	95	57.669	ENSJJAG00000017655	Nop16	92	57.669	Jaculus_jaculus
ENSXETG00000022342	nop16	98	54.438	ENSKMAG00000006164	nop16	91	54.938	Kryptolebias_marmoratus
ENSXETG00000022342	nop16	98	52.381	ENSLBEG00000018355	nop16	74	53.125	Labrus_bergylta
ENSXETG00000022342	nop16	95	55.828	ENSLACG00000014884	nop16	92	55.828	Latimeria_chalumnae
ENSXETG00000022342	nop16	91	56.051	ENSLOCG00000012348	nop16	94	55.030	Lepisosteus_oculatus
ENSXETG00000022342	nop16	95	56.790	ENSLAFG00000017886	-	92	56.790	Loxodonta_africana
ENSXETG00000022342	nop16	91	52.564	ENSMAMG00000021868	nop16	95	50.888	Mastacembelus_armatus
ENSXETG00000022342	nop16	93	53.503	ENSMZEG00005012112	nop16	90	53.503	Maylandia_zebra
ENSXETG00000022342	nop16	54	53.846	ENSMGAG00000004726	-	89	53.846	Meleagris_gallopavo
ENSXETG00000022342	nop16	54	59.341	ENSMAUG00000009852	-	86	59.341	Mesocricetus_auratus
ENSXETG00000022342	nop16	91	54.140	ENSMAUG00000015569	-	93	54.140	Mesocricetus_auratus
ENSXETG00000022342	nop16	95	57.669	ENSMOCG00000020788	Nop16	92	57.669	Microtus_ochrogaster
ENSXETG00000022342	nop16	91	52.564	ENSMMOG00000016054	nop16	91	52.564	Mola_mola
ENSXETG00000022342	nop16	95	55.488	ENSMODG00000005214	-	92	55.488	Monodelphis_domestica
ENSXETG00000022342	nop16	91	51.282	ENSMALG00000021263	nop16	88	51.282	Monopterus_albus
ENSXETG00000022342	nop16	95	57.669	MGP_CAROLIEiJ_G0018538	Nop16	92	57.669	Mus_caroli
ENSXETG00000022342	nop16	95	58.282	ENSMUSG00000025869	Nop16	92	58.282	Mus_musculus
ENSXETG00000022342	nop16	95	57.669	MGP_PahariEiJ_G0019603	Nop16	92	57.669	Mus_pahari
ENSXETG00000022342	nop16	95	58.896	MGP_SPRETEiJ_G0019418	Nop16	92	58.896	Mus_spretus
ENSXETG00000022342	nop16	98	57.396	ENSMPUG00000016964	-	95	57.396	Mustela_putorius_furo
ENSXETG00000022342	nop16	95	58.282	ENSMPUG00000012552	-	92	58.282	Mustela_putorius_furo
ENSXETG00000022342	nop16	95	55.556	ENSMLUG00000003504	-	92	55.556	Myotis_lucifugus
ENSXETG00000022342	nop16	95	56.442	ENSNGAG00000018045	Nop16	92	56.442	Nannospalax_galili
ENSXETG00000022342	nop16	93	54.140	ENSNBRG00000015181	nop16	91	54.140	Neolamprologus_brichardi
ENSXETG00000022342	nop16	95	58.282	ENSODEG00000009586	-	92	58.282	Octodon_degus
ENSXETG00000022342	nop16	93	56.051	ENSONIG00000016417	nop16	90	56.051	Oreochromis_niloticus
ENSXETG00000022342	nop16	95	57.055	ENSOCUG00000013171	-	92	57.055	Oryctolagus_cuniculus
ENSXETG00000022342	nop16	91	52.941	ENSORLG00000026611	nop16	91	52.532	Oryzias_latipes
ENSXETG00000022342	nop16	98	52.121	ENSOMEG00000023001	nop16	91	52.532	Oryzias_melastigma
ENSXETG00000022342	nop16	95	58.896	ENSOGAG00000000824	-	92	58.896	Otolemur_garnettii
ENSXETG00000022342	nop16	95	57.055	ENSOARG00000002165	-	92	57.055	Ovis_aries
ENSXETG00000022342	nop16	95	57.055	ENSPPAG00000035473	-	92	57.055	Pan_paniscus
ENSXETG00000022342	nop16	95	58.896	ENSPPRG00000016600	-	92	58.896	Panthera_pardus
ENSXETG00000022342	nop16	95	58.896	ENSPTIG00000011708	-	92	58.896	Panthera_tigris_altaica
ENSXETG00000022342	nop16	95	57.055	ENSPTRG00000017560	NOP16	92	57.055	Pan_troglodytes
ENSXETG00000022342	nop16	90	54.605	ENSPKIG00000009587	nop16	94	53.659	Paramormyrops_kingsleyae
ENSXETG00000022342	nop16	76	54.887	ENSPSIG00000013546	-	92	54.887	Pelodiscus_sinensis
ENSXETG00000022342	nop16	93	51.534	ENSPMGG00000003443	nop16	95	51.534	Periophthalmus_magnuspinnatus
ENSXETG00000022342	nop16	95	58.282	ENSPEMG00000020268	Nop16	92	58.282	Peromyscus_maniculatus_bairdii
ENSXETG00000022342	nop16	95	53.659	ENSPCIG00000009782	-	92	53.659	Phascolarctos_cinereus
ENSXETG00000022342	nop16	98	51.786	ENSPFOG00000010549	nop16	95	51.786	Poecilia_formosa
ENSXETG00000022342	nop16	76	53.543	ENSPLAG00000007124	nop16	67	53.543	Poecilia_latipinna
ENSXETG00000022342	nop16	98	51.786	ENSPMEG00000008611	nop16	95	51.786	Poecilia_mexicana
ENSXETG00000022342	nop16	98	52.381	ENSPREG00000012940	nop16	95	52.381	Poecilia_reticulata
ENSXETG00000022342	nop16	95	57.055	ENSPPYG00000016070	-	92	57.055	Pongo_abelii
ENSXETG00000022342	nop16	93	53.503	ENSPNYG00000013529	nop16	90	53.503	Pundamilia_nyererei
ENSXETG00000022342	nop16	98	53.659	ENSPNAG00000016233	nop16	96	53.659	Pygocentrus_nattereri
ENSXETG00000022342	nop16	95	58.282	ENSRNOG00000017284	Nop16	92	58.282	Rattus_norvegicus
ENSXETG00000022342	nop16	95	52.147	ENSSHAG00000001724	-	92	52.147	Sarcophilus_harrisii
ENSXETG00000022342	nop16	91	51.923	ENSSFOG00015010537	nop16	76	50.296	Scleropages_formosus
ENSXETG00000022342	nop16	91	53.205	ENSSDUG00000022349	nop16	88	53.205	Seriola_dumerili
ENSXETG00000022342	nop16	91	53.846	ENSSLDG00000025171	nop16	88	53.846	Seriola_lalandi_dorsalis
ENSXETG00000022342	nop16	80	45.517	ENSSARG00000006699	-	68	45.517	Sorex_araneus
ENSXETG00000022342	nop16	95	58.282	ENSSPUG00000006508	-	91	58.282	Sphenodon_punctatus
ENSXETG00000022342	nop16	91	54.839	ENSSPAG00000011772	nop16	88	54.839	Stegastes_partitus
ENSXETG00000022342	nop16	95	58.896	ENSSSCG00000029577	-	92	58.896	Sus_scrofa
ENSXETG00000022342	nop16	95	52.727	ENSTGUG00000000543	-	92	52.727	Taeniopygia_guttata
ENSXETG00000022342	nop16	91	52.564	ENSTRUG00000020255	nop16	95	51.786	Takifugu_rubripes
ENSXETG00000022342	nop16	91	53.846	ENSTNIG00000007616	nop16	95	52.976	Tetraodon_nigroviridis
ENSXETG00000022342	nop16	95	57.669	ENSUAMG00000005139	-	92	57.669	Ursus_americanus
ENSXETG00000022342	nop16	95	57.669	ENSVVUG00000001697	-	87	57.669	Vulpes_vulpes
ENSXETG00000022342	nop16	98	52.381	ENSXCOG00000018829	nop16	92	52.795	Xiphophorus_couchianus
ENSXETG00000022342	nop16	98	52.976	ENSXMAG00000029113	nop16	95	52.976	Xiphophorus_maculatus