EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSXETG00000022343 (Gene tree)
Gene ID: -
Gene Symbol: arl3l2
Alias: -
Full Name: Xenopus tropicalis ADP-ribosylation factor-like 3%2C like 2 (arl3l2)%2C transcript variant 1%2C mRNA.
Gene Type: protein_coding
Species: Xenopus_tropicalis
Status: putative
Strand: Minus strand
Length: 14845 bases
Position: chrGL172974.1:1173570-1188414
Accession: NM_001126745
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSXETP00000048327	MMR_HSR1	PF01926.23	2.3e-08	1	1
ENSXETP00000062438	MMR_HSR1	PF01926.23	2.4e-08	1	1
ENSXETP00000063246	MMR_HSR1	PF01926.23	2.9e-07	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSXETT00000060353	-	708	-	ENSXETP00000063246	104 (aa)	-	F7CVL2
ENSXETT00000063685	-	695	-	ENSXETP00000062438	190 (aa)	-	F7A579
ENSXETT00000048327	-	683	-	ENSXETP00000048327	186 (aa)	-	F7C0Y2

Gene Model

Click here to download ENSXETG00000022343's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSXETG00000022343's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSXETG00000022343	arl3l2	91	47.337	ENSXETG00000013916	arf5	93	47.337
ENSXETG00000022343	arl3l2	79	57.317	ENSXETG00000002540	arl1	93	44.970
ENSXETG00000022343	arl3l2	78	46.341	ENSXETG00000008725	arl14	77	40.909
ENSXETG00000022343	arl3l2	62	31.667	ENSXETG00000014011	rab1a	59	31.667
ENSXETG00000022343	arl3l2	100	39.450	ENSXETG00000011342	arl4a	86	38.372
ENSXETG00000022343	arl3l2	88	48.780	ENSXETG00000011174	arf3	91	48.780
ENSXETG00000022343	arl3l2	88	41.304	ENSXETG00000022765	arl5b	92	39.157
ENSXETG00000022343	arl3l2	91	47.337	ENSXETG00000014250	arf1	93	47.337
ENSXETG00000022343	arl3l2	93	40.462	ENSXETG00000023713	arl5c	89	40.462
ENSXETG00000022343	arl3l2	99	71.196	ENSXETG00000015225	arl3	100	70.811
ENSXETG00000022343	arl3l2	91	31.176	ENSXETG00000005212	arl8b	91	31.176
ENSXETG00000022343	arl3l2	97	50.495	ENSXETG00000001661	arl2	97	46.154
ENSXETG00000022343	arl3l2	89	44.848	ENSXETG00000008654	arf4	92	44.848
ENSXETG00000022343	arl3l2	84	43.949	ENSXETG00000015673	arl11	89	43.949
ENSXETG00000022343	arl3l2	78	40.244	ENSXETG00000022337	arl10	52	41.860
ENSXETG00000022343	arl3l2	88	34.302	ENSXETG00000032383	ARL13B	62	34.302
ENSXETG00000022343	arl3l2	93	31.319	ENSXETG00000022124	arl10b	96	31.319
ENSXETG00000022343	arl3l2	91	41.341	ENSXETG00000010915	arl4c	92	41.341
ENSXETG00000022343	arl3l2	87	41.104	ENSXETG00000021692	arl5a	90	41.104

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSXETG00000022343	arl3l2	100	73.158	ENSAPOG00000010213	arl3l2	100	73.158	Acanthochromis_polyacanthus
ENSXETG00000022343	arl3l2	99	73.370	ENSACIG00000016407	arl3l2	97	73.370	Amphilophus_citrinellus
ENSXETG00000022343	arl3l2	99	72.826	ENSAOCG00000007094	arl3l2	99	72.826	Amphiprion_ocellaris
ENSXETG00000022343	arl3l2	100	73.158	ENSAPEG00000016770	arl3l2	100	73.158	Amphiprion_percula
ENSXETG00000022343	arl3l2	100	73.158	ENSATEG00000008185	arl3l2	100	73.158	Anabas_testudineus
ENSXETG00000022343	arl3l2	99	75.000	ENSACAG00000006487	-	100	74.595	Anolis_carolinensis
ENSXETG00000022343	arl3l2	100	73.684	ENSACLG00000008835	arl3l2	100	73.684	Astatotilapia_calliptera
ENSXETG00000022343	arl3l2	100	73.158	ENSAMXG00000018516	arl3l2	100	73.158	Astyanax_mexicanus
ENSXETG00000022343	arl3l2	100	72.105	ENSAMXG00000019160	arl3l1	100	72.105	Astyanax_mexicanus
ENSXETG00000022343	arl3l2	97	77.297	ENSCPBG00000022120	-	100	77.297	Chrysemys_picta_bellii
ENSXETG00000022343	arl3l2	100	73.684	ENSCSEG00000010824	arl3l2	100	73.684	Cynoglossus_semilaevis
ENSXETG00000022343	arl3l2	100	72.632	ENSCVAG00000010611	arl3l2	100	72.632	Cyprinodon_variegatus
ENSXETG00000022343	arl3l2	100	71.053	ENSDARG00000015404	arl3l2	100	70.526	Danio_rerio
ENSXETG00000022343	arl3l2	100	72.632	ENSDARG00000111106	arl3l1	100	72.632	Danio_rerio
ENSXETG00000022343	arl3l2	100	70.000	ENSELUG00000003904	arl3l1	99	70.000	Esox_lucius
ENSXETG00000022343	arl3l2	99	73.545	ENSELUG00000016208	arl3l2	99	73.545	Esox_lucius
ENSXETG00000022343	arl3l2	99	76.087	ENSFALG00000008757	-	97	76.087	Ficedula_albicollis
ENSXETG00000022343	arl3l2	99	66.304	ENSFHEG00000000334	arl3l2	98	66.304	Fundulus_heteroclitus
ENSXETG00000022343	arl3l2	99	68.932	ENSGMOG00000006309	arl3l2	100	73.714	Gadus_morhua
ENSXETG00000022343	arl3l2	89	72.727	ENSGALG00000003134	-	96	72.727	Gallus_gallus
ENSXETG00000022343	arl3l2	97	69.307	ENSGAFG00000008601	arl3l2	78	72.189	Gambusia_affinis
ENSXETG00000022343	arl3l2	100	71.579	ENSGACG00000018033	arl3l2	100	71.579	Gasterosteus_aculeatus
ENSXETG00000022343	arl3l2	100	74.211	ENSHBUG00000002903	arl3l2	100	74.211	Haplochromis_burtoni
ENSXETG00000022343	arl3l2	100	72.632	ENSHCOG00000016255	arl3l2	100	72.632	Hippocampus_comes
ENSXETG00000022343	arl3l2	100	71.579	ENSIPUG00000019792	arl3l1	100	71.579	Ictalurus_punctatus
ENSXETG00000022343	arl3l2	100	73.158	ENSKMAG00000004435	arl3l2	100	73.158	Kryptolebias_marmoratus
ENSXETG00000022343	arl3l2	100	72.632	ENSLBEG00000027806	arl3l2	100	72.632	Labrus_bergylta
ENSXETG00000022343	arl3l2	98	71.429	ENSLACG00000016598	arl3l1	91	70.811	Latimeria_chalumnae
ENSXETG00000022343	arl3l2	100	74.737	ENSLOCG00000010965	arl3l2	100	74.737	Lepisosteus_oculatus
ENSXETG00000022343	arl3l2	99	72.826	ENSMAMG00000007434	arl3l2	91	72.432	Mastacembelus_armatus
ENSXETG00000022343	arl3l2	100	73.684	ENSMZEG00005012971	arl3l2	100	73.684	Maylandia_zebra
ENSXETG00000022343	arl3l2	99	74.457	ENSMGAG00000004170	-	100	74.457	Meleagris_gallopavo
ENSXETG00000022343	arl3l2	100	73.684	ENSMMOG00000003211	arl3l2	100	73.684	Mola_mola
ENSXETG00000022343	arl3l2	100	72.632	ENSMALG00000014013	arl3l2	100	72.632	Monopterus_albus
ENSXETG00000022343	arl3l2	100	72.632	ENSNBRG00000010560	arl3l2	100	72.632	Neolamprologus_brichardi
ENSXETG00000022343	arl3l2	100	73.158	ENSONIG00000013045	arl3l2	100	73.158	Oreochromis_niloticus
ENSXETG00000022343	arl3l2	100	72.632	ENSORLG00000005005	arl3l2	100	72.632	Oryzias_latipes
ENSXETG00000022343	arl3l2	100	72.632	ENSORLG00020012894	arl3l2	100	72.632	Oryzias_latipes_hni
ENSXETG00000022343	arl3l2	100	72.632	ENSORLG00015022526	arl3l2	100	72.632	Oryzias_latipes_hsok
ENSXETG00000022343	arl3l2	100	73.158	ENSOMEG00000005057	arl3l2	100	73.158	Oryzias_melastigma
ENSXETG00000022343	arl3l2	99	69.730	ENSPKIG00000019284	arl3l1	99	69.730	Paramormyrops_kingsleyae
ENSXETG00000022343	arl3l2	100	72.632	ENSPMGG00000017655	arl3l2	99	72.632	Periophthalmus_magnuspinnatus
ENSXETG00000022343	arl3l2	100	73.158	ENSPFOG00000005789	arl3l2	100	73.158	Poecilia_formosa
ENSXETG00000022343	arl3l2	100	73.158	ENSPLAG00000008384	arl3l2	100	73.158	Poecilia_latipinna
ENSXETG00000022343	arl3l2	90	76.786	ENSPMEG00000007916	arl3l2	93	76.786	Poecilia_mexicana
ENSXETG00000022343	arl3l2	100	73.158	ENSPREG00000003600	arl3l2	100	73.158	Poecilia_reticulata
ENSXETG00000022343	arl3l2	100	73.684	ENSPNYG00000000364	arl3l2	100	73.684	Pundamilia_nyererei
ENSXETG00000022343	arl3l2	100	73.158	ENSPNAG00000010083	arl3l2	100	73.158	Pygocentrus_nattereri
ENSXETG00000022343	arl3l2	100	72.105	ENSPNAG00000013238	arl3l1	100	72.105	Pygocentrus_nattereri
ENSXETG00000022343	arl3l2	100	73.158	ENSSFOG00015022345	-	100	73.158	Scleropages_formosus
ENSXETG00000022343	arl3l2	100	74.211	ENSSFOG00015014993	-	100	74.211	Scleropages_formosus
ENSXETG00000022343	arl3l2	100	71.579	ENSSMAG00000003002	arl3l2	94	71.579	Scophthalmus_maximus
ENSXETG00000022343	arl3l2	100	73.158	ENSSDUG00000003943	arl3l2	100	73.158	Seriola_dumerili
ENSXETG00000022343	arl3l2	99	72.826	ENSSLDG00000003967	arl3l2	100	70.558	Seriola_lalandi_dorsalis
ENSXETG00000022343	arl3l2	100	76.842	ENSSPUG00000005249	-	100	76.842	Sphenodon_punctatus
ENSXETG00000022343	arl3l2	99	72.826	ENSSPAG00000000321	arl3l2	97	72.826	Stegastes_partitus
ENSXETG00000022343	arl3l2	99	78.261	ENSTGUG00000000378	-	100	78.261	Taeniopygia_guttata
ENSXETG00000022343	arl3l2	100	72.632	ENSTRUG00000004035	arl3l2	100	72.632	Takifugu_rubripes
ENSXETG00000022343	arl3l2	100	72.105	ENSTNIG00000014233	arl3l2	100	72.105	Tetraodon_nigroviridis
ENSXETG00000022343	arl3l2	100	73.684	ENSXCOG00000003337	arl3l2	100	73.684	Xiphophorus_couchianus
ENSXETG00000022343	arl3l2	100	73.684	ENSXMAG00000008700	arl3l2	100	73.684	Xiphophorus_maculatus