EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSXETG00000022412 (Gene tree)
Gene ID: -
Gene Symbol: -
Alias: -
Full Name: -
Gene Type: protein_coding
Species: Xenopus_tropicalis
Status: putative
Strand: Minus strand
Length: 9121 bases
Position: chrGL172680.1:99316-108436
Accession: -
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSXETP00000050765	DND1_DSRM	PF14709.7	7.4e-28	1	1
ENSXETP00000050765	RRM_1	PF00076.22	2e-38	1	3
ENSXETP00000050765	RRM_1	PF00076.22	2e-38	2	3
ENSXETP00000050765	RRM_1	PF00076.22	2e-38	3	3

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSXETT00000050765	-	1602	-	ENSXETP00000050765	533 (aa)	-	F6XBG8

Gene Model

Click here to download ENSXETG00000022412's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSXETG00000022412's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSXETG00000022412	-	56	55.518	ENSXETG00000007102	hnrnpr	56	54.849
ENSXETG00000022412	-	99	75.791	ENSXETG00000032344	-	100	75.791
ENSXETG00000022412	-	69	82.065	ENSXETG00000032067	-	100	81.793
ENSXETG00000022412	-	55	69.153	ENSXETG00000012802	rbm47	72	69.153
ENSXETG00000022412	-	79	61.616	ENSXETG00000006611	a1cf	72	61.616

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSXETG00000022412	-	99	74.859	ENSG00000151962	RBM46	100	82.707	Homo_sapiens
ENSXETG00000022412	-	87	60.870	ENSAPOG00000009209	rbm46	92	61.284	Acanthochromis_polyacanthus
ENSXETG00000022412	-	99	74.672	ENSAMEG00000013290	RBM46	100	74.672	Ailuropoda_melanoleuca
ENSXETG00000022412	-	86	58.120	ENSACIG00000014500	rbm46	89	59.091	Amphilophus_citrinellus
ENSXETG00000022412	-	83	63.677	ENSAOCG00000001892	-	86	63.901	Amphiprion_ocellaris
ENSXETG00000022412	-	83	63.677	ENSAPEG00000017762	rbm46	97	63.901	Amphiprion_percula
ENSXETG00000022412	-	98	56.622	ENSATEG00000010775	rbm46	98	57.198	Anabas_testudineus
ENSXETG00000022412	-	87	75.803	ENSAPLG00000005116	RBM46	100	75.803	Anas_platyrhynchos
ENSXETG00000022412	-	99	72.505	ENSACAG00000015599	RBM46	100	72.505	Anolis_carolinensis
ENSXETG00000022412	-	99	73.921	ENSANAG00000029193	RBM46	99	77.516	Aotus_nancymaae
ENSXETG00000022412	-	86	61.783	ENSACLG00000016153	rbm46	94	56.307	Astatotilapia_calliptera
ENSXETG00000022412	-	95	58.223	ENSAMXG00000020892	-	98	57.197	Astyanax_mexicanus
ENSXETG00000022412	-	83	64.000	ENSAMXG00000009397	rbm46	97	64.000	Astyanax_mexicanus
ENSXETG00000022412	-	99	74.859	ENSBTAG00000001696	RBM46	100	74.859	Bos_taurus
ENSXETG00000022412	-	99	73.546	ENSCJAG00000001768	RBM46	99	77.088	Callithrix_jacchus
ENSXETG00000022412	-	99	75.235	ENSCAFG00000008473	RBM46	100	75.235	Canis_familiaris
ENSXETG00000022412	-	99	75.235	ENSCAFG00020002468	RBM46	100	75.235	Canis_lupus_dingo
ENSXETG00000022412	-	99	74.109	ENSCHIG00000000502	RBM46	100	74.109	Capra_hircus
ENSXETG00000022412	-	88	77.282	ENSTSYG00000010435	RBM46	99	77.730	Carlito_syrichta
ENSXETG00000022412	-	68	77.260	ENSCAPG00000011841	-	98	77.260	Cavia_aperea
ENSXETG00000022412	-	88	76.221	ENSCAPG00000011928	-	97	76.221	Cavia_aperea
ENSXETG00000022412	-	95	73.333	ENSCPOG00000020396	-	92	77.489	Cavia_porcellus
ENSXETG00000022412	-	99	70.632	ENSCPOG00000019272	-	100	70.632	Cavia_porcellus
ENSXETG00000022412	-	99	73.783	ENSCPOG00000010284	-	99	76.660	Cavia_porcellus
ENSXETG00000022412	-	99	61.090	ENSCCAG00000001323	-	98	63.812	Cebus_capucinus
ENSXETG00000022412	-	99	74.109	ENSCCAG00000027619	-	99	77.730	Cebus_capucinus
ENSXETG00000022412	-	88	77.119	ENSCATG00000040148	RBM46	99	77.730	Cercocebus_atys
ENSXETG00000022412	-	96	73.643	ENSCLAG00000011886	-	99	73.643	Chinchilla_lanigera
ENSXETG00000022412	-	99	73.546	ENSCLAG00000005846	-	99	77.088	Chinchilla_lanigera
ENSXETG00000022412	-	99	74.672	ENSCSAG00000003263	RBM46	100	74.672	Chlorocebus_sabaeus
ENSXETG00000022412	-	99	73.546	ENSCHOG00000003429	RBM46	100	73.546	Choloepus_hoffmanni
ENSXETG00000022412	-	83	77.303	ENSCPBG00000009314	RBM46	97	77.303	Chrysemys_picta_bellii
ENSXETG00000022412	-	88	77.282	ENSCANG00000039065	RBM46	99	77.730	Colobus_angolensis_palliatus
ENSXETG00000022412	-	99	74.672	ENSCGRG00001016714	Rbm46	99	77.730	Cricetulus_griseus_chok1gshd
ENSXETG00000022412	-	99	74.672	ENSCGRG00000011738	Rbm46	99	77.730	Cricetulus_griseus_crigri
ENSXETG00000022412	-	83	56.798	ENSCSEG00000005530	rbm46	95	56.798	Cynoglossus_semilaevis
ENSXETG00000022412	-	86	59.615	ENSCVAG00000021013	rbm46	95	61.438	Cyprinodon_variegatus
ENSXETG00000022412	-	97	59.351	ENSDARG00000079452	rbm46	99	59.038	Danio_rerio
ENSXETG00000022412	-	99	74.484	ENSDNOG00000016195	RBM46	100	74.484	Dasypus_novemcinctus
ENSXETG00000022412	-	98	75.573	ENSDORG00000006405	Rbm46	97	78.603	Dipodomys_ordii
ENSXETG00000022412	-	99	73.171	ENSETEG00000014902	RBM46	100	73.171	Echinops_telfairi
ENSXETG00000022412	-	99	73.734	ENSEASG00005015821	RBM46	100	73.734	Equus_asinus_asinus
ENSXETG00000022412	-	88	76.271	ENSECAG00000007649	RBM46	97	76.271	Equus_caballus
ENSXETG00000022412	-	99	72.420	ENSEEUG00000011824	RBM46	100	72.420	Erinaceus_europaeus
ENSXETG00000022412	-	68	66.310	ENSELUG00000008166	rbm46	94	66.310	Esox_lucius
ENSXETG00000022412	-	99	74.484	ENSFCAG00000029812	RBM46	99	77.944	Felis_catus
ENSXETG00000022412	-	86	74.672	ENSFALG00000013157	RBM46	90	74.672	Ficedula_albicollis
ENSXETG00000022412	-	99	72.233	ENSFDAG00000019281	-	100	72.233	Fukomys_damarensis
ENSXETG00000022412	-	87	74.573	ENSFDAG00000006445	-	93	74.573	Fukomys_damarensis
ENSXETG00000022412	-	74	61.364	ENSFHEG00000013257	rbm46	87	61.364	Fundulus_heteroclitus
ENSXETG00000022412	-	82	71.005	ENSGALG00000009278	RBM46	95	70.759	Gallus_gallus
ENSXETG00000022412	-	56	73.770	ENSGAFG00000020245	rbm46	71	73.529	Gambusia_affinis
ENSXETG00000022412	-	97	71.291	ENSGAGG00000002019	RBM46	90	77.186	Gopherus_agassizii
ENSXETG00000022412	-	99	74.672	ENSGGOG00000001876	RBM46	99	77.944	Gorilla_gorilla
ENSXETG00000022412	-	83	59.417	ENSHBUG00000009609	rbm46	91	64.133	Haplochromis_burtoni
ENSXETG00000022412	-	96	60.694	ENSHGLG00000010742	-	86	66.287	Heterocephalus_glaber_female
ENSXETG00000022412	-	99	66.917	ENSHGLG00000002463	-	99	75.463	Heterocephalus_glaber_female
ENSXETG00000022412	-	98	61.143	ENSHGLG00000002940	-	100	61.143	Heterocephalus_glaber_female
ENSXETG00000022412	-	97	59.038	ENSHGLG00100018987	-	96	59.363	Heterocephalus_glaber_male
ENSXETG00000022412	-	99	71.617	ENSHGLG00100012752	-	99	75.322	Heterocephalus_glaber_male
ENSXETG00000022412	-	96	60.694	ENSHGLG00100004977	-	86	66.287	Heterocephalus_glaber_male
ENSXETG00000022412	-	85	49.224	ENSHCOG00000012998	rbm46	90	49.224	Hippocampus_comes
ENSXETG00000022412	-	98	57.537	ENSIPUG00000024038	rbm46	98	61.711	Ictalurus_punctatus
ENSXETG00000022412	-	99	74.484	ENSSTOG00000007918	RBM46	99	77.516	Ictidomys_tridecemlineatus
ENSXETG00000022412	-	88	76.271	ENSJJAG00000003902	Rbm46	99	76.874	Jaculus_jaculus
ENSXETG00000022412	-	88	63.136	ENSKMAG00000015127	rbm46	88	63.136	Kryptolebias_marmoratus
ENSXETG00000022412	-	99	72.846	ENSLACG00000002062	RBM46	100	72.846	Latimeria_chalumnae
ENSXETG00000022412	-	95	65.029	ENSLOCG00000008298	rbm46	95	69.663	Lepisosteus_oculatus
ENSXETG00000022412	-	87	78.158	ENSLAFG00000015448	RBM46	99	78.158	Loxodonta_africana
ENSXETG00000022412	-	88	77.331	ENSMFAG00000043485	RBM46	99	77.944	Macaca_fascicularis
ENSXETG00000022412	-	88	77.331	ENSMMUG00000021147	RBM46	97	77.331	Macaca_mulatta
ENSXETG00000022412	-	88	77.331	ENSMNEG00000002787	RBM46	99	77.944	Macaca_nemestrina
ENSXETG00000022412	-	88	77.119	ENSMLEG00000029756	RBM46	99	77.730	Mandrillus_leucophaeus
ENSXETG00000022412	-	84	64.302	ENSMAMG00000009093	rbm46	95	61.570	Mastacembelus_armatus
ENSXETG00000022412	-	83	63.288	ENSMZEG00005027849	rbm46	91	63.288	Maylandia_zebra
ENSXETG00000022412	-	82	70.776	ENSMGAG00000001457	RBM46	95	70.536	Meleagris_gallopavo
ENSXETG00000022412	-	99	74.484	ENSMAUG00000009911	Rbm46	99	77.516	Mesocricetus_auratus
ENSXETG00000022412	-	99	74.672	ENSMICG00000042747	RBM46	99	77.730	Microcebus_murinus
ENSXETG00000022412	-	99	74.672	ENSMOCG00000001188	Rbm46	99	77.730	Microtus_ochrogaster
ENSXETG00000022412	-	85	60.776	ENSMMOG00000011214	rbm46	97	55.660	Mola_mola
ENSXETG00000022412	-	99	68.954	ENSMODG00000001302	RBM46	100	68.954	Monodelphis_domestica
ENSXETG00000022412	-	80	63.364	ENSMALG00000006185	rbm46	92	62.442	Monopterus_albus
ENSXETG00000022412	-	99	74.484	MGP_CAROLIEiJ_G0025101	Rbm46	99	77.944	Mus_caroli
ENSXETG00000022412	-	99	74.296	ENSMUSG00000033882	Rbm46	99	77.730	Mus_musculus
ENSXETG00000022412	-	99	74.484	MGP_PahariEiJ_G0026544	Rbm46	99	77.944	Mus_pahari
ENSXETG00000022412	-	99	74.109	MGP_SPRETEiJ_G0026043	Rbm46	99	77.516	Mus_spretus
ENSXETG00000022412	-	88	77.331	ENSMPUG00000005670	RBM46	97	77.331	Mustela_putorius_furo
ENSXETG00000022412	-	99	74.157	ENSMLUG00000003221	RBM46	100	74.157	Myotis_lucifugus
ENSXETG00000022412	-	99	73.921	ENSNGAG00000004231	Rbm46	99	77.302	Nannospalax_galili
ENSXETG00000022412	-	83	63.739	ENSNBRG00000000273	rbm46	85	63.252	Neolamprologus_brichardi
ENSXETG00000022412	-	88	77.119	ENSNLEG00000006184	RBM46	99	77.730	Nomascus_leucogenys
ENSXETG00000022412	-	78	80.048	ENSMEUG00000013328	RBM46	99	79.756	Notamacropus_eugenii
ENSXETG00000022412	-	53	82.270	ENSOPRG00000007136	RBM46	100	83.333	Ochotona_princeps
ENSXETG00000022412	-	95	72.941	ENSODEG00000018002	-	91	77.253	Octodon_degus
ENSXETG00000022412	-	99	73.546	ENSODEG00000000735	-	99	76.660	Octodon_degus
ENSXETG00000022412	-	86	62.661	ENSONIG00000014096	rbm46	97	63.516	Oreochromis_niloticus
ENSXETG00000022412	-	88	75.316	ENSOANG00000002141	RBM46	98	75.316	Ornithorhynchus_anatinus
ENSXETG00000022412	-	99	74.484	ENSOCUG00000017859	RBM46	100	74.484	Oryctolagus_cuniculus
ENSXETG00000022412	-	87	58.898	ENSORLG00000002429	rbm46	91	60.262	Oryzias_latipes
ENSXETG00000022412	-	86	59.227	ENSORLG00020022154	rbm46	91	57.143	Oryzias_latipes_hni
ENSXETG00000022412	-	91	57.260	ENSORLG00015020234	rbm46	94	60.085	Oryzias_latipes_hsok
ENSXETG00000022412	-	83	60.177	ENSOMEG00000022580	rbm46	93	57.290	Oryzias_melastigma
ENSXETG00000022412	-	99	74.859	ENSOGAG00000005647	RBM46	100	74.859	Otolemur_garnettii
ENSXETG00000022412	-	99	74.672	ENSOARG00000016406	RBM46	97	77.707	Ovis_aries
ENSXETG00000022412	-	88	77.331	ENSPPAG00000043236	RBM46	99	77.944	Pan_paniscus
ENSXETG00000022412	-	99	74.296	ENSPPRG00000009416	RBM46	99	77.730	Panthera_pardus
ENSXETG00000022412	-	99	74.296	ENSPTIG00000017449	RBM46	99	77.730	Panthera_tigris_altaica
ENSXETG00000022412	-	88	77.331	ENSPTRG00000016538	RBM46	99	77.944	Pan_troglodytes
ENSXETG00000022412	-	99	74.672	ENSPANG00000004186	RBM46	99	77.944	Papio_anubis
ENSXETG00000022412	-	95	60.700	ENSPKIG00000015334	rbm46	89	60.700	Paramormyrops_kingsleyae
ENSXETG00000022412	-	87	77.944	ENSPSIG00000006429	RBM46	95	77.944	Pelodiscus_sinensis
ENSXETG00000022412	-	87	59.740	ENSPMGG00000019872	rbm46	94	61.197	Periophthalmus_magnuspinnatus
ENSXETG00000022412	-	99	74.672	ENSPEMG00000013899	Rbm46	99	77.730	Peromyscus_maniculatus_bairdii
ENSXETG00000022412	-	99	75.422	ENSPCIG00000029626	RBM46	100	75.422	Phascolarctos_cinereus
ENSXETG00000022412	-	78	72.293	ENSPFOG00000001079	rbm46	77	72.293	Poecilia_formosa
ENSXETG00000022412	-	88	61.864	ENSPLAG00000004541	rbm46	82	61.734	Poecilia_latipinna
ENSXETG00000022412	-	88	61.864	ENSPMEG00000015724	rbm46	91	62.832	Poecilia_mexicana
ENSXETG00000022412	-	88	61.864	ENSPREG00000014464	rbm46	95	64.080	Poecilia_reticulata
ENSXETG00000022412	-	99	74.484	ENSPPYG00000015144	RBM46	100	74.484	Pongo_abelii
ENSXETG00000022412	-	99	71.053	ENSPCAG00000003110	RBM46	99	71.617	Procavia_capensis
ENSXETG00000022412	-	99	73.734	ENSPCOG00000024347	RBM46	99	77.302	Propithecus_coquereli
ENSXETG00000022412	-	99	74.859	ENSPVAG00000008376	RBM46	100	74.859	Pteropus_vampyrus
ENSXETG00000022412	-	96	60.870	ENSPNAG00000025312	rbm46	99	59.962	Pygocentrus_nattereri
ENSXETG00000022412	-	99	74.672	ENSRNOG00000025823	Rbm46	100	74.672	Rattus_norvegicus
ENSXETG00000022412	-	89	76.632	ENSRBIG00000032583	RBM46	99	77.302	Rhinopithecus_bieti
ENSXETG00000022412	-	89	76.842	ENSRROG00000044288	RBM46	99	77.516	Rhinopithecus_roxellana
ENSXETG00000022412	-	99	74.109	ENSSBOG00000033028	RBM46	99	77.516	Saimiri_boliviensis_boliviensis
ENSXETG00000022412	-	99	75.422	ENSSHAG00000012596	RBM46	100	75.422	Sarcophilus_harrisii
ENSXETG00000022412	-	98	61.950	ENSSFOG00015000087	rbm46	99	60.870	Scleropages_formosus
ENSXETG00000022412	-	83	62.162	ENSSMAG00000017042	rbm46	93	62.162	Scophthalmus_maximus
ENSXETG00000022412	-	89	60.040	ENSSDUG00000020645	rbm46	90	62.876	Seriola_dumerili
ENSXETG00000022412	-	99	74.672	ENSSARG00000006520	RBM46	100	74.672	Sorex_araneus
ENSXETG00000022412	-	99	72.388	ENSSPUG00000012525	-	100	72.388	Sphenodon_punctatus
ENSXETG00000022412	-	87	76.231	ENSSPUG00000004773	-	97	76.231	Sphenodon_punctatus
ENSXETG00000022412	-	85	60.976	ENSSPAG00000013697	rbm46	94	60.976	Stegastes_partitus
ENSXETG00000022412	-	88	76.907	ENSSSCG00000008994	RBM46	97	77.556	Sus_scrofa
ENSXETG00000022412	-	86	73.799	ENSTGUG00000005307	RBM46	98	73.799	Taeniopygia_guttata
ENSXETG00000022412	-	83	61.161	ENSTRUG00000004237	rbm46	89	61.161	Takifugu_rubripes
ENSXETG00000022412	-	83	60.532	ENSTNIG00000008714	rbm46	84	60.532	Tetraodon_nigroviridis
ENSXETG00000022412	-	98	72.710	ENSTBEG00000013949	RBM46	98	72.710	Tupaia_belangeri
ENSXETG00000022412	-	99	73.921	ENSTTRG00000001239	RBM46	100	73.921	Tursiops_truncatus
ENSXETG00000022412	-	99	74.672	ENSUAMG00000026593	RBM46	100	74.672	Ursus_americanus
ENSXETG00000022412	-	99	74.484	ENSUMAG00000016442	RBM46	100	74.484	Ursus_maritimus
ENSXETG00000022412	-	99	75.047	ENSVVUG00000024957	RBM46	99	77.944	Vulpes_vulpes
ENSXETG00000022412	-	86	60.797	ENSXMAG00000008237	rbm46	90	61.456	Xiphophorus_maculatus