EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSXETG00000022512 (Gene tree)
Gene ID: -
Gene Symbol: larp1b
Alias: -
Full Name: Xenopus tropicalis La ribonucleoprotein domain family member 1B (larp1b)%2C mRNA.
Gene Type: protein_coding
Species: Xenopus_tropicalis
Status: putative
Strand: Minus strand
Length: 22352 bases
Position: chrGL172652.1:4551966-4574317
Accession: NM_001127989
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSXETP00000048733	La	PF05383.17	5.1e-20	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSXETT00000048733	-	3541	-	ENSXETP00000048733	995 (aa)	-	F6U6C8

Gene Model

Click here to download ENSXETG00000022512's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSXETG00000022512's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSXETG00000022512	larp1b	95	52.236	ENSXETG00000008413	larp1	94	51.829

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSXETG00000022512	larp1b	92	58.793	ENSG00000138709	LARP1B	97	60.177	Homo_sapiens
ENSXETG00000022512	larp1b	93	52.352	ENSAPOG00000020101	larp1b	89	52.503	Acanthochromis_polyacanthus
ENSXETG00000022512	larp1b	53	56.204	ENSAMEG00000002748	LARP1B	98	56.204	Ailuropoda_melanoleuca
ENSXETG00000022512	larp1b	93	51.420	ENSACIG00000023890	larp1b	90	49.848	Amphilophus_citrinellus
ENSXETG00000022512	larp1b	86	50.567	ENSAOCG00000014268	larp1b	91	50.571	Amphiprion_ocellaris
ENSXETG00000022512	larp1b	93	53.122	ENSAPEG00000004126	larp1b	91	51.892	Amphiprion_percula
ENSXETG00000022512	larp1b	93	51.290	ENSATEG00000017849	larp1b	89	51.496	Anabas_testudineus
ENSXETG00000022512	larp1b	87	58.804	ENSAPLG00000010129	LARP1B	100	59.565	Anas_platyrhynchos
ENSXETG00000022512	larp1b	88	59.609	ENSACAG00000011338	LARP1B	93	60.043	Anolis_carolinensis
ENSXETG00000022512	larp1b	73	55.541	ENSANAG00000034618	LARP1B	96	51.807	Aotus_nancymaae
ENSXETG00000022512	larp1b	93	51.129	ENSACLG00000011948	larp1b	90	50.810	Astatotilapia_calliptera
ENSXETG00000022512	larp1b	93	48.697	ENSAMXG00000006805	larp1b	85	50.105	Astyanax_mexicanus
ENSXETG00000022512	larp1b	94	57.895	ENSBTAG00000012135	LARP1B	97	54.633	Bos_taurus
ENSXETG00000022512	larp1b	88	60.044	ENSCJAG00000003338	LARP1B	99	62.293	Callithrix_jacchus
ENSXETG00000022512	larp1b	89	61.002	ENSCAFG00000003831	LARP1B	99	61.330	Canis_familiaris
ENSXETG00000022512	larp1b	89	60.430	ENSCAFG00020018899	LARP1B	99	60.430	Canis_lupus_dingo
ENSXETG00000022512	larp1b	89	60.475	ENSCHIG00000023144	LARP1B	99	60.475	Capra_hircus
ENSXETG00000022512	larp1b	86	60.486	ENSCCAG00000021948	LARP1B	98	60.706	Cebus_capucinus
ENSXETG00000022512	larp1b	87	60.244	ENSCATG00000013541	LARP1B	97	60.354	Cercocebus_atys
ENSXETG00000022512	larp1b	87	60.927	ENSCSAG00000003582	LARP1B	97	61.038	Chlorocebus_sabaeus
ENSXETG00000022512	larp1b	86	56.146	ENSCHOG00000005354	LARP1B	98	56.146	Choloepus_hoffmanni
ENSXETG00000022512	larp1b	92	60.042	ENSCPBG00000017480	LARP1B	90	59.143	Chrysemys_picta_bellii
ENSXETG00000022512	larp1b	87	58.875	ENSCANG00000026958	LARP1B	97	59.096	Colobus_angolensis_palliatus
ENSXETG00000022512	larp1b	90	53.158	ENSCSEG00000013519	larp1b	89	50.966	Cynoglossus_semilaevis
ENSXETG00000022512	larp1b	93	51.696	ENSCVAG00000005046	larp1b	92	50.794	Cyprinodon_variegatus
ENSXETG00000022512	larp1b	99	50.633	ENSDARG00000061169	larp1b	89	51.423	Danio_rerio
ENSXETG00000022512	larp1b	50	55.664	ENSDNOG00000018765	-	99	56.335	Dasypus_novemcinctus
ENSXETG00000022512	larp1b	78	57.459	ENSETEG00000012497	LARP1B	86	57.016	Echinops_telfairi
ENSXETG00000022512	larp1b	89	46.074	ENSEBUG00000003668	larp1b	93	45.971	Eptatretus_burgeri
ENSXETG00000022512	larp1b	89	60.280	ENSEASG00005018106	LARP1B	99	60.280	Equus_asinus_asinus
ENSXETG00000022512	larp1b	94	58.951	ENSECAG00000001088	LARP1B	88	58.956	Equus_caballus
ENSXETG00000022512	larp1b	60	54.313	ENSELUG00000023774	larp1b	90	43.733	Esox_lucius
ENSXETG00000022512	larp1b	51	55.577	ENSFCAG00000014650	-	98	55.577	Felis_catus
ENSXETG00000022512	larp1b	89	56.564	ENSFALG00000008098	LARP1B	99	56.183	Ficedula_albicollis
ENSXETG00000022512	larp1b	96	51.562	ENSFHEG00000010264	larp1b	89	51.305	Fundulus_heteroclitus
ENSXETG00000022512	larp1b	80	68.889	ENSGMOG00000005207	larp1b	77	69.259	Gadus_morhua
ENSXETG00000022512	larp1b	91	55.826	ENSGALG00000010207	LARP1B	91	56.992	Gallus_gallus
ENSXETG00000022512	larp1b	78	60.584	ENSGAFG00000012012	larp1b	93	54.545	Gambusia_affinis
ENSXETG00000022512	larp1b	94	47.231	ENSGACG00000004609	larp1b	90	48.332	Gasterosteus_aculeatus
ENSXETG00000022512	larp1b	91	60.361	ENSGAGG00000017209	LARP1B	88	59.660	Gopherus_agassizii
ENSXETG00000022512	larp1b	87	60.398	ENSGGOG00000015900	LARP1B	97	60.509	Gorilla_gorilla
ENSXETG00000022512	larp1b	93	51.496	ENSHBUG00000009730	larp1b	89	51.170	Haplochromis_burtoni
ENSXETG00000022512	larp1b	68	57.019	ENSHCOG00000000918	larp1b	96	57.308	Hippocampus_comes
ENSXETG00000022512	larp1b	95	50.551	ENSIPUG00000012138	larp1b	89	51.259	Ictalurus_punctatus
ENSXETG00000022512	larp1b	93	50.309	ENSKMAG00000011589	larp1b	93	50.050	Kryptolebias_marmoratus
ENSXETG00000022512	larp1b	93	51.263	ENSLBEG00000005655	larp1b	89	51.279	Labrus_bergylta
ENSXETG00000022512	larp1b	93	61.740	ENSLACG00000015247	LARP1B	99	56.423	Latimeria_chalumnae
ENSXETG00000022512	larp1b	92	57.708	ENSLOCG00000010684	larp1b	97	58.300	Lepisosteus_oculatus
ENSXETG00000022512	larp1b	87	60.687	ENSMFAG00000002218	LARP1B	97	60.908	Macaca_fascicularis
ENSXETG00000022512	larp1b	87	61.019	ENSMMUG00000021347	LARP1B	97	61.130	Macaca_mulatta
ENSXETG00000022512	larp1b	79	65.318	ENSMNEG00000030406	LARP1B	97	64.622	Macaca_nemestrina
ENSXETG00000022512	larp1b	87	60.356	ENSMLEG00000009306	LARP1B	97	60.579	Mandrillus_leucophaeus
ENSXETG00000022512	larp1b	94	51.217	ENSMAMG00000000081	larp1b	91	51.303	Mastacembelus_armatus
ENSXETG00000022512	larp1b	67	60.178	ENSMZEG00005002545	larp1b	86	59.912	Maylandia_zebra
ENSXETG00000022512	larp1b	87	52.735	ENSMGAG00000004809	LARP1B	100	53.166	Meleagris_gallopavo
ENSXETG00000022512	larp1b	88	61.446	ENSMICG00000036111	LARP1B	99	61.774	Microcebus_murinus
ENSXETG00000022512	larp1b	50	44.890	ENSMICG00000028052	-	99	43.687	Microcebus_murinus
ENSXETG00000022512	larp1b	89	61.266	ENSMODG00000012300	LARP1B	82	59.979	Monodelphis_domestica
ENSXETG00000022512	larp1b	94	51.420	ENSMALG00000003638	larp1b	90	50.523	Monopterus_albus
ENSXETG00000022512	larp1b	91	60.749	ENSMPUG00000017365	LARP1B	85	59.834	Mustela_putorius_furo
ENSXETG00000022512	larp1b	87	58.015	ENSMLUG00000010229	LARP1B	99	58.824	Myotis_lucifugus
ENSXETG00000022512	larp1b	76	54.438	ENSNBRG00000023846	larp1b	85	53.028	Neolamprologus_brichardi
ENSXETG00000022512	larp1b	87	60.000	ENSNLEG00000013819	LARP1B	97	60.110	Nomascus_leucogenys
ENSXETG00000022512	larp1b	66	61.765	ENSMEUG00000010308	LARP1B	86	61.765	Notamacropus_eugenii
ENSXETG00000022512	larp1b	79	54.897	ENSOPRG00000005478	LARP1B	90	53.688	Ochotona_princeps
ENSXETG00000022512	larp1b	91	51.027	ENSONIG00000012386	larp1b	99	50.205	Oreochromis_niloticus
ENSXETG00000022512	larp1b	89	59.848	ENSOCUG00000013330	LARP1B	99	60.174	Oryctolagus_cuniculus
ENSXETG00000022512	larp1b	94	50.461	ENSORLG00000017954	larp1b	88	51.029	Oryzias_latipes
ENSXETG00000022512	larp1b	94	50.615	ENSORLG00020013081	larp1b	88	50.978	Oryzias_latipes_hni
ENSXETG00000022512	larp1b	94	50.719	ENSORLG00015009580	larp1b	89	50.978	Oryzias_latipes_hsok
ENSXETG00000022512	larp1b	94	51.172	ENSOMEG00000004210	larp1b	92	50.350	Oryzias_melastigma
ENSXETG00000022512	larp1b	87	63.009	ENSOGAG00000005771	LARP1B	100	63.205	Otolemur_garnettii
ENSXETG00000022512	larp1b	88	59.761	ENSOARG00000015300	LARP1B	99	59.761	Ovis_aries
ENSXETG00000022512	larp1b	87	60.177	ENSPPAG00000030439	LARP1B	97	60.288	Pan_paniscus
ENSXETG00000022512	larp1b	51	55.577	ENSPPRG00000002743	-	98	55.577	Panthera_pardus
ENSXETG00000022512	larp1b	51	55.577	ENSPTIG00000011225	LARP1B	98	55.577	Panthera_tigris_altaica
ENSXETG00000022512	larp1b	87	60.066	ENSPTRG00000016437	LARP1B	97	60.177	Pan_troglodytes
ENSXETG00000022512	larp1b	87	61.019	ENSPANG00000012488	LARP1B	97	61.130	Papio_anubis
ENSXETG00000022512	larp1b	92	46.162	ENSPKIG00000014360	larp1b	96	46.895	Paramormyrops_kingsleyae
ENSXETG00000022512	larp1b	90	59.979	ENSPSIG00000012885	LARP1B	99	59.979	Pelodiscus_sinensis
ENSXETG00000022512	larp1b	70	58.014	ENSPMGG00000007207	larp1b	83	58.014	Periophthalmus_magnuspinnatus
ENSXETG00000022512	larp1b	65	55.289	ENSPMAG00000002700	larp1b	97	49.309	Petromyzon_marinus
ENSXETG00000022512	larp1b	86	62.346	ENSPCIG00000026516	LARP1B	95	67.961	Phascolarctos_cinereus
ENSXETG00000022512	larp1b	93	51.632	ENSPFOG00000019519	larp1b	89	51.394	Poecilia_formosa
ENSXETG00000022512	larp1b	56	46.341	ENSPFOG00000022837	-	88	45.514	Poecilia_formosa
ENSXETG00000022512	larp1b	94	52.590	ENSPLAG00000007115	larp1b	90	52.257	Poecilia_latipinna
ENSXETG00000022512	larp1b	93	53.271	ENSPMEG00000001224	larp1b	88	53.138	Poecilia_mexicana
ENSXETG00000022512	larp1b	87	59.801	ENSPCAG00000007546	LARP1B	95	61.017	Procavia_capensis
ENSXETG00000022512	larp1b	75	71.930	ENSPCOG00000021874	LARP1B	96	71.930	Propithecus_coquereli
ENSXETG00000022512	larp1b	86	57.542	ENSPVAG00000005373	LARP1B	97	58.002	Pteropus_vampyrus
ENSXETG00000022512	larp1b	67	59.647	ENSPNYG00000017357	larp1b	86	59.389	Pundamilia_nyererei
ENSXETG00000022512	larp1b	92	50.782	ENSPNAG00000008823	larp1b	87	51.879	Pygocentrus_nattereri
ENSXETG00000022512	larp1b	51	55.854	ENSRBIG00000039982	-	99	55.854	Rhinopithecus_bieti
ENSXETG00000022512	larp1b	87	60.576	ENSRROG00000030771	LARP1B	97	60.797	Rhinopithecus_roxellana
ENSXETG00000022512	larp1b	64	55.900	ENSSHAG00000014474	LARP1B	99	54.142	Sarcophilus_harrisii
ENSXETG00000022512	larp1b	88	52.324	ENSSMAG00000006347	larp1b	96	50.470	Scophthalmus_maximus
ENSXETG00000022512	larp1b	93	51.996	ENSSDUG00000004182	larp1b	90	51.207	Seriola_dumerili
ENSXETG00000022512	larp1b	67	59.287	ENSSLDG00000014613	larp1b	69	55.634	Seriola_lalandi_dorsalis
ENSXETG00000022512	larp1b	85	57.692	ENSSPUG00000011837	LARP1B	97	58.858	Sphenodon_punctatus
ENSXETG00000022512	larp1b	93	52.000	ENSSPAG00000017772	larp1b	91	51.741	Stegastes_partitus
ENSXETG00000022512	larp1b	94	58.614	ENSSSCG00000034280	LARP1B	99	85.567	Sus_scrofa
ENSXETG00000022512	larp1b	73	62.988	ENSTGUG00000002098	-	90	62.516	Taeniopygia_guttata
ENSXETG00000022512	larp1b	96	49.344	ENSTRUG00000005612	larp1b	92	50.201	Takifugu_rubripes
ENSXETG00000022512	larp1b	91	49.645	ENSTNIG00000012398	larp1b	99	49.949	Tetraodon_nigroviridis
ENSXETG00000022512	larp1b	64	55.081	ENSTBEG00000004177	LARP1B	77	53.953	Tupaia_belangeri
ENSXETG00000022512	larp1b	81	58.670	ENSTTRG00000012984	LARP1B	91	58.670	Tursiops_truncatus
ENSXETG00000022512	larp1b	87	61.564	ENSUMAG00000007373	LARP1B	96	61.564	Ursus_maritimus
ENSXETG00000022512	larp1b	80	59.014	ENSVPAG00000007223	LARP1B	91	59.014	Vicugna_pacos
ENSXETG00000022512	larp1b	89	61.220	ENSVVUG00000011307	LARP1B	99	61.220	Vulpes_vulpes
ENSXETG00000022512	larp1b	65	58.986	ENSXCOG00000004435	larp1b	68	58.372	Xiphophorus_couchianus
ENSXETG00000022512	larp1b	93	52.917	ENSXMAG00000008150	larp1b	88	53.007	Xiphophorus_maculatus