EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSXETG00000022604 (Gene tree)
Gene ID: -
Gene Symbol: eef1a1o
Alias: -
Full Name: Xenopus tropicalis eukaryotic translation elongation factor 1 alpha 1%2C oocyte form (eef1a1o)%2C mRNA.
Gene Type: protein_coding
Species: Xenopus_tropicalis
Status: putative
Strand: Minus strand
Length: 4741 bases
Position: chrGL172709.1:694115-698855
Accession: NM_203970
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSXETP00000048899	GTP_EFTU	PF00009.27	1e-52	1	1
ENSXETP00000048899	GTP_EFTU_D2	PF03144.25	8.3e-16	1	1
ENSXETP00000048899	GTP_EFTU_D3	PF03143.17	4.9e-41	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSXETT00000048899	-	1584	-	ENSXETP00000048899	461 (aa)	-	Q6P356

Gene Model

Click here to download ENSXETG00000022604's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSXETG00000022604's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSXETG00000022604	eef1a1o	96	71.655	ENSXETG00000017744	42Sp50	97	70.917
ENSXETG00000022604	eef1a1o	93	39.631	ENSXETG00000003726	hbs1l	62	39.631
ENSXETG00000022604	eef1a1o	99	91.739	ENSXETG00000001182	eef1a1	99	91.739
ENSXETG00000022604	eef1a1o	99	89.783	ENSXETG00000019567	eef1a2	99	89.783
ENSXETG00000022604	eef1a1o	95	38.009	ENSXETG00000005540	gspt1	76	37.868

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSXETG00000022604	eef1a1o	67	87.948	ENSAPOG00000004757	eef1a1l1	99	98.438	Acanthochromis_polyacanthus
ENSXETG00000022604	eef1a1o	100	79.393	ENSAMEG00000004317	-	100	79.393	Ailuropoda_melanoleuca
ENSXETG00000022604	eef1a1o	100	84.165	ENSAMEG00000009677	-	100	84.165	Ailuropoda_melanoleuca
ENSXETG00000022604	eef1a1o	100	85.033	ENSCAFG00000013249	-	100	85.033	Canis_familiaris
ENSXETG00000022604	eef1a1o	100	85.033	ENSCAFG00020020007	-	100	85.033	Canis_lupus_dingo
ENSXETG00000022604	eef1a1o	100	89.805	ENSCPBG00000000748	-	100	89.805	Chrysemys_picta_bellii
ENSXETG00000022604	eef1a1o	100	89.371	ENSCPBG00000000646	-	100	89.371	Chrysemys_picta_bellii
ENSXETG00000022604	eef1a1o	99	91.522	ENSDARG00000020850	eef1a1l1	99	91.522	Danio_rerio
ENSXETG00000022604	eef1a1o	85	84.010	ENSEASG00005018013	-	99	84.010	Equus_asinus_asinus
ENSXETG00000022604	eef1a1o	98	89.207	ENSEASG00005012365	-	96	89.810	Equus_asinus_asinus
ENSXETG00000022604	eef1a1o	100	86.985	ENSECAG00000022260	-	100	86.985	Equus_caballus
ENSXETG00000022604	eef1a1o	100	91.974	ENSELUG00000023536	eef1a1l1	100	91.974	Esox_lucius
ENSXETG00000022604	eef1a1o	100	89.154	ENSFCAG00000030530	-	100	89.154	Felis_catus
ENSXETG00000022604	eef1a1o	100	90.239	ENSGAGG00000000642	-	100	90.239	Gopherus_agassizii
ENSXETG00000022604	eef1a1o	100	89.371	ENSGAGG00000000648	-	100	89.371	Gopherus_agassizii
ENSXETG00000022604	eef1a1o	90	88.620	ENSLBEG00000002790	eef1a1l1	99	88.620	Labrus_bergylta
ENSXETG00000022604	eef1a1o	100	86.117	ENSLAFG00000028081	-	99	86.117	Loxodonta_africana
ENSXETG00000022604	eef1a1o	100	88.503	ENSLAFG00000025161	-	100	88.503	Loxodonta_africana
ENSXETG00000022604	eef1a1o	75	91.329	ENSOANG00000012066	-	100	91.329	Ornithorhynchus_anatinus
ENSXETG00000022604	eef1a1o	90	88.862	ENSOMEG00000006888	-	99	88.862	Oryzias_melastigma
ENSXETG00000022604	eef1a1o	100	87.852	ENSOARG00000002943	-	100	87.852	Ovis_aries
ENSXETG00000022604	eef1a1o	99	88.158	ENSPPRG00000005678	-	98	88.158	Panthera_pardus
ENSXETG00000022604	eef1a1o	100	83.080	ENSPPRG00000008525	-	100	83.080	Panthera_pardus
ENSXETG00000022604	eef1a1o	100	85.033	ENSPTIG00000006939	-	100	85.033	Panthera_tigris_altaica
ENSXETG00000022604	eef1a1o	100	89.805	ENSPSIG00000008610	-	100	89.805	Pelodiscus_sinensis
ENSXETG00000022604	eef1a1o	66	96.296	ENSPVAG00000007682	-	65	96.296	Pteropus_vampyrus
ENSXETG00000022604	eef1a1o	100	82.900	ENSSMAG00000018455	-	99	82.900	Scophthalmus_maximus
ENSXETG00000022604	eef1a1o	100	88.720	ENSSPUG00000003655	-	100	88.720	Sphenodon_punctatus
ENSXETG00000022604	eef1a1o	98	82.743	ENSSSCG00000038035	-	100	82.430	Sus_scrofa
ENSXETG00000022604	eef1a1o	100	88.503	ENSSSCG00000034113	-	100	88.503	Sus_scrofa
ENSXETG00000022604	eef1a1o	100	82.430	ENSUAMG00000008928	-	100	82.430	Ursus_americanus
ENSXETG00000022604	eef1a1o	50	86.900	ENSUAMG00000006085	-	96	86.900	Ursus_americanus
ENSXETG00000022604	eef1a1o	100	76.356	ENSUAMG00000007676	-	100	76.356	Ursus_americanus
ENSXETG00000022604	eef1a1o	100	84.165	ENSUMAG00000013211	-	100	84.165	Ursus_maritimus
ENSXETG00000022604	eef1a1o	100	84.816	ENSVVUG00000026886	-	100	84.816	Vulpes_vulpes