EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Orthologs

Description

Ensembl ID: ENSXETG00000022919 (Gene tree)
Gene ID: -
Gene Symbol: snrnp70
Alias: -
Full Name: Xenopus tropicalis small nuclear ribonucleoprotein%2C U1 70kDa subunit (snrnp70)%2C mRNA.
Gene Type: protein_coding
Species: Xenopus_tropicalis
Status: putative
Strand: Plus strand
Length: 13801 bases
Position: chrGL173096.1:540835-554635
Accession: NM_001281770
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSXETP00000060923	RRM_1	PF00076.22	7.4e-19	1	1
ENSXETP00000049555	RRM_1	PF00076.22	1e-18	1	1
ENSXETP00000060923	U1snRNP70_N	PF12220.8	1.5e-27	1	1
ENSXETP00000049555	U1snRNP70_N	PF12220.8	2e-27	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSXETT00000049555	-	2004	XM_012966476	ENSXETP00000049555	471 (aa)	XP_012821930	Q66II8
ENSXETT00000066283	-	1442	-	ENSXETP00000060923	397 (aa)	-	F6YYV4

Gene Model

Click here to download ENSXETG00000022919's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSXETG00000022919's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSXETG00000022919	snrnp70	57	95.595	ENSG00000104852	SNRNP70	99	93.293	Homo_sapiens
ENSXETG00000022919	snrnp70	56	91.441	ENSAOCG00000011672	snrnp70	50	82.063	Amphiprion_ocellaris
ENSXETG00000022919	snrnp70	100	76.483	ENSACAG00000013276	SNRNP70	100	66.443	Anolis_carolinensis
ENSXETG00000022919	snrnp70	51	54.950	WBGene00004390	rnp-7	56	53.723	Caenorhabditis_elegans
ENSXETG00000022919	snrnp70	57	95.595	ENSCJAG00000000193	SNRNP70	99	93.293	Callithrix_jacchus
ENSXETG00000022919	snrnp70	57	95.595	ENSCAFG00000003711	SNRNP70	99	93.293	Canis_familiaris
ENSXETG00000022919	snrnp70	57	92.576	ENSCAFG00020025470	SNRNP70	99	89.157	Canis_lupus_dingo
ENSXETG00000022919	snrnp70	57	95.595	ENSCATG00000016149	SNRNP70	50	96.804	Cercocebus_atys
ENSXETG00000022919	snrnp70	54	96.759	ENSCSAG00000002759	SNRNP70	99	60.592	Chlorocebus_sabaeus
ENSXETG00000022919	snrnp70	100	74.788	ENSCPBG00000014841	SNRNP70	100	65.090	Chrysemys_picta_bellii
ENSXETG00000022919	snrnp70	52	69.903	ENSCSAVG00000010109	-	50	70.157	Ciona_savignyi
ENSXETG00000022919	snrnp70	57	95.595	ENSCANG00000036607	SNRNP70	92	95.595	Colobus_angolensis_palliatus
ENSXETG00000022919	snrnp70	57	88.496	ENSCSEG00000011978	snrnp70	100	88.496	Cynoglossus_semilaevis
ENSXETG00000022919	snrnp70	56	90.991	ENSDARG00000077126	snrnp70	99	88.820	Danio_rerio
ENSXETG00000022919	snrnp70	57	95.595	ENSFCAG00000042603	SNRNP70	54	95.595	Felis_catus
ENSXETG00000022919	snrnp70	57	95.595	ENSFDAG00000013830	SNRNP70	95	96.296	Fukomys_damarensis
ENSXETG00000022919	snrnp70	56	90.045	ENSGMOG00000011492	snrnp70	97	90.045	Gadus_morhua
ENSXETG00000022919	snrnp70	56	90.541	ENSGACG00000000448	snrnp70	72	88.210	Gasterosteus_aculeatus
ENSXETG00000022919	snrnp70	57	95.595	ENSGGOG00000008245	SNRNP70	99	93.293	Gorilla_gorilla
ENSXETG00000022919	snrnp70	54	90.278	ENSLACG00000015684	SNRNP70	99	62.338	Latimeria_chalumnae
ENSXETG00000022919	snrnp70	57	95.595	ENSLAFG00000028536	SNRNP70	98	95.595	Loxodonta_africana
ENSXETG00000022919	snrnp70	57	95.595	ENSMFAG00000039824	SNRNP70	50	96.804	Macaca_fascicularis
ENSXETG00000022919	snrnp70	54	96.759	ENSMMUG00000004928	SNRNP70	99	93.293	Macaca_mulatta
ENSXETG00000022919	snrnp70	57	95.595	ENSMNEG00000038057	SNRNP70	99	67.599	Macaca_nemestrina
ENSXETG00000022919	snrnp70	57	95.595	ENSMLEG00000030967	SNRNP70	50	96.804	Mandrillus_leucophaeus
ENSXETG00000022919	snrnp70	57	95.595	ENSMICG00000038437	SNRNP70	99	93.293	Microcebus_murinus
ENSXETG00000022919	snrnp70	61	83.058	ENSMMOG00000005467	snrnp70	54	80.800	Mola_mola
ENSXETG00000022919	snrnp70	57	95.595	MGP_PahariEiJ_G0012939	Snrnp70	100	94.495	Mus_pahari
ENSXETG00000022919	snrnp70	57	95.595	ENSMPUG00000003258	SNRNP70	52	95.595	Mustela_putorius_furo
ENSXETG00000022919	snrnp70	56	91.441	ENSNBRG00000003126	snrnp70	95	91.441	Neolamprologus_brichardi
ENSXETG00000022919	snrnp70	56	95.475	ENSNLEG00000004899	SNRNP70	89	95.475	Nomascus_leucogenys
ENSXETG00000022919	snrnp70	57	95.595	ENSODEG00000017499	SNRNP70	57	86.538	Octodon_degus
ENSXETG00000022919	snrnp70	56	90.991	ENSONIG00000007822	snrnp70	52	90.991	Oreochromis_niloticus
ENSXETG00000022919	snrnp70	57	95.575	ENSOANG00000005213	SNRNP70	99	95.575	Ornithorhynchus_anatinus
ENSXETG00000022919	snrnp70	99	64.938	ENSOARG00000012608	SNRNP70	99	64.938	Ovis_aries
ENSXETG00000022919	snrnp70	57	95.595	ENSPPAG00000035067	SNRNP70	99	93.293	Pan_paniscus
ENSXETG00000022919	snrnp70	57	95.595	ENSPPRG00000005579	SNRNP70	52	95.595	Panthera_pardus
ENSXETG00000022919	snrnp70	57	95.595	ENSPTRG00000011277	SNRNP70	99	93.293	Pan_troglodytes
ENSXETG00000022919	snrnp70	57	95.595	ENSPANG00000004068	SNRNP70	50	96.804	Papio_anubis
ENSXETG00000022919	snrnp70	67	74.717	ENSPSIG00000015251	SNRNP70	86	83.258	Pelodiscus_sinensis
ENSXETG00000022919	snrnp70	55	96.774	ENSPCIG00000007296	SNRNP70	100	64.091	Phascolarctos_cinereus
ENSXETG00000022919	snrnp70	57	94.714	ENSPPYG00000010234	SNRNP70	50	95.890	Pongo_abelii
ENSXETG00000022919	snrnp70	57	87.665	ENSPCOG00000023103	SNRNP70	81	87.665	Propithecus_coquereli
ENSXETG00000022919	snrnp70	57	95.595	ENSRBIG00000042387	SNRNP70	84	95.595	Rhinopithecus_bieti
ENSXETG00000022919	snrnp70	57	95.595	ENSRROG00000033636	SNRNP70	84	95.595	Rhinopithecus_roxellana
ENSXETG00000022919	snrnp70	52	87.045	ENSSFOG00015004562	snrnp70	99	54.105	Scleropages_formosus
ENSXETG00000022919	snrnp70	100	69.198	ENSSPUG00000016621	SNRNP70	52	96.347	Sphenodon_punctatus
ENSXETG00000022919	snrnp70	99	62.741	ENSTTRG00000017099	SNRNP70	50	96.804	Tursiops_truncatus
ENSXETG00000022919	snrnp70	57	95.595	ENSUAMG00000016147	SNRNP70	52	95.595	Ursus_americanus
ENSXETG00000022919	snrnp70	57	95.595	ENSUMAG00000001467	SNRNP70	99	93.293	Ursus_maritimus
ENSXETG00000022919	snrnp70	56	82.805	ENSVPAG00000005959	-	100	78.281	Vicugna_pacos
ENSXETG00000022919	snrnp70	57	95.595	ENSVVUG00000022976	SNRNP70	99	93.293	Vulpes_vulpes