EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSXETG00000022984 (Gene tree)
Gene ID: -
Gene Symbol: ddx47
Alias: -
Full Name: DEAD-box helicase 47
Gene Type: protein_coding
Species: Xenopus_tropicalis
Status: putative
Strand: Minus strand
Length: 9346 bases
Position: chrGL172745.1:1609047-1618392
Accession: XB-GENE-1002302
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSXETP00000049720	ResIII	PF04851.15	1.9e-06	1	1
ENSXETP00000049718	ResIII	PF04851.15	2.4e-06	1	1
ENSXETP00000049720	DEAD	PF00270.29	1.3e-48	1	1
ENSXETP00000049718	DEAD	PF00270.29	1.6e-48	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSXETT00000049718	-	1650	XM_002934729	ENSXETP00000049718	448 (aa)	XP_002934775	F7DX11
ENSXETT00000049720	-	1512	XM_002934731	ENSXETP00000049720	402 (aa)	XP_002934777	F7DWW5

Gene Model

Click here to download ENSXETG00000022984's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSXETG00000022984's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSXETG00000022984	ddx47	82	30.446	ENSXETG00000028097	ddx19b	80	30.446
ENSXETG00000022984	ddx47	68	31.044	ENSXETG00000022359	ddx51	59	30.179
ENSXETG00000022984	ddx47	78	38.936	ENSXETG00000012580	ddx5	58	38.936
ENSXETG00000022984	ddx47	85	32.376	ENSXETG00000020123	eif4a1	94	32.376
ENSXETG00000022984	ddx47	88	35.363	ENSXETG00000006900	ddx17	54	40.419
ENSXETG00000022984	ddx47	77	34.167	ENSXETG00000033518	DDX41	58	34.167
ENSXETG00000022984	ddx47	80	33.661	ENSXETG00000006258	ddx31	66	33.661
ENSXETG00000022984	ddx47	74	34.746	ENSXETG00000005825	ddx55	59	34.746
ENSXETG00000022984	ddx47	77	33.696	ENSXETG00000030832	DDX4	57	33.604
ENSXETG00000022984	ddx47	77	46.875	ENSXETG00000017825	ddx1	56	46.875
ENSXETG00000022984	ddx47	75	39.359	ENSXETG00000011767	ddx43	51	39.359
ENSXETG00000022984	ddx47	77	32.370	ENSXETG00000002498	ddx39b	81	31.768
ENSXETG00000022984	ddx47	88	34.414	ENSXETG00000000311	ddx59	66	34.414
ENSXETG00000022984	ddx47	91	44.118	ENSXETG00000010314	ddx24	61	44.118
ENSXETG00000022984	ddx47	81	30.928	ENSXETG00000005435	ddx28	77	31.282
ENSXETG00000022984	ddx47	82	34.232	ENSXETG00000010061	ddx6	76	34.232
ENSXETG00000022984	ddx47	81	31.762	ENSXETG00000019000	ddx56	73	31.762
ENSXETG00000022984	ddx47	80	34.726	ENSXETG00000015477	ddx3x	55	34.726
ENSXETG00000022984	ddx47	77	36.599	ENSXETG00000020607	ddx39a	81	36.599
ENSXETG00000022984	ddx47	82	32.970	ENSXETG00000013720	eif4a3	88	32.970
ENSXETG00000022984	ddx47	55	38.153	ENSXETG00000020819	ddx18	50	38.153
ENSXETG00000022984	ddx47	77	39.266	ENSXETG00000014458	ddx10	51	39.718
ENSXETG00000022984	ddx47	83	33.067	ENSXETG00000019390	eif4a2	92	33.067
ENSXETG00000022984	ddx47	87	48.111	ENSXETG00000010135	ddx49	91	45.890

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSXETG00000022984	ddx47	99	87.004	ENSG00000213782	DDX47	97	93.130	Homo_sapiens
ENSXETG00000022984	ddx47	94	85.748	ENSAPOG00000021751	ddx47	92	83.973	Acanthochromis_polyacanthus
ENSXETG00000022984	ddx47	99	87.168	ENSAMEG00000010740	DDX47	99	86.947	Ailuropoda_melanoleuca
ENSXETG00000022984	ddx47	95	84.848	ENSACIG00000022802	ddx47	92	83.333	Amphilophus_citrinellus
ENSXETG00000022984	ddx47	94	85.511	ENSAOCG00000015213	ddx47	91	83.747	Amphiprion_ocellaris
ENSXETG00000022984	ddx47	97	83.333	ENSAPEG00000014476	ddx47	94	86.207	Amphiprion_percula
ENSXETG00000022984	ddx47	97	85.092	ENSATEG00000010277	ddx47	92	84.615	Anabas_testudineus
ENSXETG00000022984	ddx47	93	90.602	ENSAPLG00000015324	DDX47	93	89.953	Anas_platyrhynchos
ENSXETG00000022984	ddx47	99	86.577	ENSACAG00000010648	DDX47	99	86.353	Anolis_carolinensis
ENSXETG00000022984	ddx47	81	90.358	ENSANAG00000025235	DDX47	98	90.358	Aotus_nancymaae
ENSXETG00000022984	ddx47	98	83.973	ENSAMXG00000010727	ddx47	93	84.282	Astyanax_mexicanus
ENSXETG00000022984	ddx47	99	86.623	ENSBTAG00000019608	DDX47	99	86.623	Bos_taurus
ENSXETG00000022984	ddx47	95	64.583	WBGene00012059	T26G10.1	84	66.504	Caenorhabditis_elegans
ENSXETG00000022984	ddx47	99	87.225	ENSCJAG00000021633	DDX47	99	87.696	Callithrix_jacchus
ENSXETG00000022984	ddx47	98	87.613	ENSCAFG00000013224	DDX47	94	87.196	Canis_familiaris
ENSXETG00000022984	ddx47	98	87.613	ENSCAFG00020006612	DDX47	99	87.196	Canis_lupus_dingo
ENSXETG00000022984	ddx47	100	86.463	ENSCHIG00000026011	DDX47	100	86.463	Capra_hircus
ENSXETG00000022984	ddx47	99	86.313	ENSTSYG00000002978	DDX47	99	86.313	Carlito_syrichta
ENSXETG00000022984	ddx47	61	90.411	ENSCAPG00000002814	DDX47	99	90.411	Cavia_aperea
ENSXETG00000022984	ddx47	97	87.557	ENSCPOG00000035172	DDX47	99	87.140	Cavia_porcellus
ENSXETG00000022984	ddx47	99	87.500	ENSCCAG00000025717	DDX47	99	87.500	Cebus_capucinus
ENSXETG00000022984	ddx47	62	84.252	ENSCATG00000038188	-	99	84.400	Cercocebus_atys
ENSXETG00000022984	ddx47	99	86.976	ENSCATG00000014281	-	99	86.976	Cercocebus_atys
ENSXETG00000022984	ddx47	99	87.196	ENSCLAG00000015856	DDX47	99	87.196	Chinchilla_lanigera
ENSXETG00000022984	ddx47	99	87.696	ENSCSAG00000008569	DDX47	98	87.696	Chlorocebus_sabaeus
ENSXETG00000022984	ddx47	99	56.579	ENSCHOG00000010943	DDX47	99	56.579	Choloepus_hoffmanni
ENSXETG00000022984	ddx47	99	89.013	ENSCPBG00000020967	-	98	88.789	Chrysemys_picta_bellii
ENSXETG00000022984	ddx47	92	72.222	ENSCING00000002081	-	92	72.155	Ciona_intestinalis
ENSXETG00000022984	ddx47	99	70.089	ENSCSAVG00000011566	-	93	73.861	Ciona_savignyi
ENSXETG00000022984	ddx47	99	86.976	ENSCANG00000040222	DDX47	99	86.976	Colobus_angolensis_palliatus
ENSXETG00000022984	ddx47	96	90.233	ENSCGRG00001014927	Ddx47	95	90.092	Cricetulus_griseus_chok1gshd
ENSXETG00000022984	ddx47	96	90.233	ENSCGRG00000010351	Ddx47	95	90.566	Cricetulus_griseus_crigri
ENSXETG00000022984	ddx47	91	86.978	ENSCSEG00000007687	ddx47	92	86.978	Cynoglossus_semilaevis
ENSXETG00000022984	ddx47	99	81.319	ENSDNOG00000040799	DDX47	99	81.319	Dasypus_novemcinctus
ENSXETG00000022984	ddx47	97	72.500	FBgn0032919	CG9253	81	75.366	Drosophila_melanogaster
ENSXETG00000022984	ddx47	84	88.372	ENSETEG00000011487	DDX47	83	88.372	Echinops_telfairi
ENSXETG00000022984	ddx47	99	87.196	ENSEASG00005014653	DDX47	99	87.196	Equus_asinus_asinus
ENSXETG00000022984	ddx47	99	87.417	ENSECAG00000023622	DDX47	99	87.417	Equus_caballus
ENSXETG00000022984	ddx47	83	90.000	ENSEEUG00000008639	DDX47	81	90.000	Erinaceus_europaeus
ENSXETG00000022984	ddx47	96	85.880	ENSELUG00000009495	ddx47	83	85.747	Esox_lucius
ENSXETG00000022984	ddx47	99	87.140	ENSFCAG00000013990	DDX47	99	87.140	Felis_catus
ENSXETG00000022984	ddx47	93	90.625	ENSFALG00000011391	DDX47	95	87.982	Ficedula_albicollis
ENSXETG00000022984	ddx47	99	87.168	ENSFDAG00000014635	-	99	86.947	Fukomys_damarensis
ENSXETG00000022984	ddx47	73	67.857	ENSFDAG00000004127	-	73	67.143	Fukomys_damarensis
ENSXETG00000022984	ddx47	97	83.716	ENSFHEG00000011435	ddx47	94	82.589	Fundulus_heteroclitus
ENSXETG00000022984	ddx47	85	86.162	ENSGMOG00000010290	ddx47	100	86.162	Gadus_morhua
ENSXETG00000022984	ddx47	93	90.361	ENSGALG00000011794	DDX47	95	89.559	Gallus_gallus
ENSXETG00000022984	ddx47	97	84.439	ENSGAFG00000017403	ddx47	94	83.742	Gambusia_affinis
ENSXETG00000022984	ddx47	99	81.432	ENSGACG00000007092	ddx47	97	80.984	Gasterosteus_aculeatus
ENSXETG00000022984	ddx47	99	87.919	ENSGAGG00000023801	DDX47	90	87.472	Gopherus_agassizii
ENSXETG00000022984	ddx47	99	86.784	ENSGGOG00000005882	DDX47	99	86.784	Gorilla_gorilla
ENSXETG00000022984	ddx47	95	84.615	ENSHBUG00000022213	ddx47	93	83.108	Haplochromis_burtoni
ENSXETG00000022984	ddx47	99	87.168	ENSHGLG00000007623	DDX47	99	86.947	Heterocephalus_glaber_female
ENSXETG00000022984	ddx47	99	87.168	ENSHGLG00100009764	DDX47	99	86.947	Heterocephalus_glaber_male
ENSXETG00000022984	ddx47	97	84.318	ENSHCOG00000005496	ddx47	92	83.747	Hippocampus_comes
ENSXETG00000022984	ddx47	99	84.045	ENSIPUG00000023788	ddx47	95	84.045	Ictalurus_punctatus
ENSXETG00000022984	ddx47	94	90.330	ENSSTOG00000027266	DDX47	96	90.330	Ictidomys_tridecemlineatus
ENSXETG00000022984	ddx47	99	86.755	ENSJJAG00000000118	Ddx47	99	86.755	Jaculus_jaculus
ENSXETG00000022984	ddx47	94	85.748	ENSKMAG00000013071	ddx47	90	83.521	Kryptolebias_marmoratus
ENSXETG00000022984	ddx47	92	85.542	ENSLBEG00000028348	ddx47	89	83.871	Labrus_bergylta
ENSXETG00000022984	ddx47	96	89.486	ENSLACG00000013814	DDX47	96	88.330	Latimeria_chalumnae
ENSXETG00000022984	ddx47	99	87.225	ENSLAFG00000015474	DDX47	99	87.225	Loxodonta_africana
ENSXETG00000022984	ddx47	99	86.976	ENSMFAG00000042577	DDX47	99	86.976	Macaca_fascicularis
ENSXETG00000022984	ddx47	99	86.976	ENSMMUG00000017993	DDX47	99	86.976	Macaca_mulatta
ENSXETG00000022984	ddx47	99	76.380	ENSMNEG00000044164	DDX47	99	76.380	Macaca_nemestrina
ENSXETG00000022984	ddx47	99	86.976	ENSMLEG00000040358	-	99	86.976	Mandrillus_leucophaeus
ENSXETG00000022984	ddx47	62	85.039	ENSMLEG00000037204	-	89	85.039	Mandrillus_leucophaeus
ENSXETG00000022984	ddx47	97	83.524	ENSMAMG00000008915	ddx47	92	83.296	Mastacembelus_armatus
ENSXETG00000022984	ddx47	95	74.877	ENSMZEG00005004902	DDX47	92	73.634	Maylandia_zebra
ENSXETG00000022984	ddx47	91	46.747	ENSMZEG00005022989	-	93	47.013	Maylandia_zebra
ENSXETG00000022984	ddx47	91	90.954	ENSMGAG00000011857	DDX47	98	90.284	Meleagris_gallopavo
ENSXETG00000022984	ddx47	99	87.417	ENSMAUG00000012214	Ddx47	99	87.417	Mesocricetus_auratus
ENSXETG00000022984	ddx47	83	89.389	ENSMICG00000010086	DDX47	99	90.228	Microcebus_murinus
ENSXETG00000022984	ddx47	99	87.417	ENSMOCG00000003693	Ddx47	99	87.417	Microtus_ochrogaster
ENSXETG00000022984	ddx47	94	82.938	ENSMMOG00000008610	ddx47	93	81.524	Mola_mola
ENSXETG00000022984	ddx47	98	85.523	ENSMODG00000018223	DDX47	98	85.078	Monodelphis_domestica
ENSXETG00000022984	ddx47	96	83.871	ENSMALG00000002420	ddx47	92	83.296	Monopterus_albus
ENSXETG00000022984	ddx47	96	90.553	MGP_CAROLIEiJ_G0028986	Ddx47	95	90.553	Mus_caroli
ENSXETG00000022984	ddx47	96	90.323	ENSMUSG00000030204	Ddx47	95	90.323	Mus_musculus
ENSXETG00000022984	ddx47	96	90.553	MGP_PahariEiJ_G0022748	Ddx47	95	90.553	Mus_pahari
ENSXETG00000022984	ddx47	96	90.323	MGP_SPRETEiJ_G0030034	Ddx47	95	90.323	Mus_spretus
ENSXETG00000022984	ddx47	99	86.755	ENSMPUG00000011726	DDX47	99	86.755	Mustela_putorius_furo
ENSXETG00000022984	ddx47	96	89.631	ENSMLUG00000003163	DDX47	95	89.631	Myotis_lucifugus
ENSXETG00000022984	ddx47	96	89.401	ENSNGAG00000020166	Ddx47	95	89.401	Nannospalax_galili
ENSXETG00000022984	ddx47	95	84.579	ENSNBRG00000001394	ddx47	94	82.405	Neolamprologus_brichardi
ENSXETG00000022984	ddx47	99	87.004	ENSNLEG00000003605	DDX47	99	87.004	Nomascus_leucogenys
ENSXETG00000022984	ddx47	87	78.517	ENSMEUG00000005930	DDX47	99	78.517	Notamacropus_eugenii
ENSXETG00000022984	ddx47	78	90.940	ENSOPRG00000014446	DDX47	79	90.940	Ochotona_princeps
ENSXETG00000022984	ddx47	96	89.767	ENSODEG00000012890	DDX47	99	86.304	Octodon_degus
ENSXETG00000022984	ddx47	99	83.149	ENSONIG00000008325	ddx47	100	82.705	Oreochromis_niloticus
ENSXETG00000022984	ddx47	59	89.591	ENSOANG00000003026	-	94	89.591	Ornithorhynchus_anatinus
ENSXETG00000022984	ddx47	96	89.535	ENSOCUG00000014390	DDX47	95	89.401	Oryctolagus_cuniculus
ENSXETG00000022984	ddx47	97	84.055	ENSORLG00000015021	ddx47	91	83.747	Oryzias_latipes
ENSXETG00000022984	ddx47	95	84.651	ENSORLG00020005546	ddx47	93	86.486	Oryzias_latipes_hni
ENSXETG00000022984	ddx47	95	84.419	ENSORLG00015017712	ddx47	91	83.747	Oryzias_latipes_hsok
ENSXETG00000022984	ddx47	98	82.993	ENSOMEG00000008065	ddx47	92	82.697	Oryzias_melastigma
ENSXETG00000022984	ddx47	99	84.564	ENSOGAG00000003748	DDX47	99	84.564	Otolemur_garnettii
ENSXETG00000022984	ddx47	100	86.463	ENSOARG00000020845	DDX47	97	86.463	Ovis_aries
ENSXETG00000022984	ddx47	99	87.004	ENSPPAG00000039793	DDX47	99	87.004	Pan_paniscus
ENSXETG00000022984	ddx47	99	86.947	ENSPPRG00000017561	DDX47	99	86.947	Panthera_pardus
ENSXETG00000022984	ddx47	99	86.947	ENSPTIG00000019604	DDX47	99	86.947	Panthera_tigris_altaica
ENSXETG00000022984	ddx47	99	86.755	ENSPTRG00000033743	DDX47	99	86.755	Pan_troglodytes
ENSXETG00000022984	ddx47	99	87.696	ENSPANG00000016430	DDX47	98	87.696	Papio_anubis
ENSXETG00000022984	ddx47	96	82.529	ENSPKIG00000006718	ddx47	89	85.330	Paramormyrops_kingsleyae
ENSXETG00000022984	ddx47	96	89.862	ENSPSIG00000006056	DDX47	95	89.631	Pelodiscus_sinensis
ENSXETG00000022984	ddx47	94	83.491	ENSPMGG00000009920	ddx47	92	81.839	Periophthalmus_magnuspinnatus
ENSXETG00000022984	ddx47	99	87.859	ENSPEMG00000009746	Ddx47	99	87.417	Peromyscus_maniculatus_bairdii
ENSXETG00000022984	ddx47	94	88.571	ENSPMAG00000000186	-	100	88.571	Petromyzon_marinus
ENSXETG00000022984	ddx47	99	85.650	ENSPCIG00000029927	DDX47	97	85.426	Phascolarctos_cinereus
ENSXETG00000022984	ddx47	97	84.439	ENSPFOG00000003330	ddx47	90	83.742	Poecilia_formosa
ENSXETG00000022984	ddx47	91	79.412	ENSPLAG00000014318	ddx47	87	79.412	Poecilia_latipinna
ENSXETG00000022984	ddx47	97	84.439	ENSPMEG00000018616	ddx47	90	83.742	Poecilia_mexicana
ENSXETG00000022984	ddx47	94	86.905	ENSPREG00000015560	ddx47	94	82.000	Poecilia_reticulata
ENSXETG00000022984	ddx47	99	87.225	ENSPPYG00000004309	DDX47	99	87.225	Pongo_abelii
ENSXETG00000022984	ddx47	66	92.617	ENSPCAG00000013197	-	71	92.617	Procavia_capensis
ENSXETG00000022984	ddx47	99	86.947	ENSPCOG00000028218	DDX47	99	86.947	Propithecus_coquereli
ENSXETG00000022984	ddx47	100	83.736	ENSPVAG00000002640	DDX47	100	83.736	Pteropus_vampyrus
ENSXETG00000022984	ddx47	95	84.615	ENSPNYG00000020669	ddx47	92	83.108	Pundamilia_nyererei
ENSXETG00000022984	ddx47	95	84.028	ENSPNAG00000011435	ddx47	94	83.220	Pygocentrus_nattereri
ENSXETG00000022984	ddx47	99	87.417	ENSRNOG00000007838	Ddx47	99	87.417	Rattus_norvegicus
ENSXETG00000022984	ddx47	99	86.976	ENSRBIG00000026934	DDX47	99	86.976	Rhinopithecus_bieti
ENSXETG00000022984	ddx47	99	86.976	ENSRROG00000025014	DDX47	99	86.976	Rhinopithecus_roxellana
ENSXETG00000022984	ddx47	90	55.556	YHR065C	-	81	55.556	Saccharomyces_cerevisiae
ENSXETG00000022984	ddx47	99	87.719	ENSSBOG00000035866	DDX47	99	87.719	Saimiri_boliviensis_boliviensis
ENSXETG00000022984	ddx47	98	85.969	ENSSHAG00000010825	DDX47	87	85.969	Sarcophilus_harrisii
ENSXETG00000022984	ddx47	94	86.256	ENSSFOG00015013392	ddx47	93	85.584	Scleropages_formosus
ENSXETG00000022984	ddx47	93	85.071	ENSSMAG00000004179	ddx47	90	82.844	Scophthalmus_maximus
ENSXETG00000022984	ddx47	97	78.678	ENSSDUG00000018110	ddx47	90	78.178	Seriola_dumerili
ENSXETG00000022984	ddx47	95	84.687	ENSSLDG00000018142	ddx47	89	83.747	Seriola_lalandi_dorsalis
ENSXETG00000022984	ddx47	70	92.500	ENSSARG00000007535	DDX47	94	92.500	Sorex_araneus
ENSXETG00000022984	ddx47	98	88.435	ENSSPUG00000004958	DDX47	96	87.755	Sphenodon_punctatus
ENSXETG00000022984	ddx47	96	84.491	ENSSPAG00000016431	ddx47	89	83.070	Stegastes_partitus
ENSXETG00000022984	ddx47	99	86.976	ENSSSCG00000033149	DDX47	95	89.858	Sus_scrofa
ENSXETG00000022984	ddx47	93	89.904	ENSTGUG00000009385	DDX47	99	86.253	Taeniopygia_guttata
ENSXETG00000022984	ddx47	98	83.070	ENSTRUG00000021826	ddx47	95	82.960	Takifugu_rubripes
ENSXETG00000022984	ddx47	99	76.380	ENSTBEG00000013697	DDX47	99	76.159	Tupaia_belangeri
ENSXETG00000022984	ddx47	100	86.154	ENSTTRG00000015036	DDX47	100	86.154	Tursiops_truncatus
ENSXETG00000022984	ddx47	99	86.947	ENSUAMG00000016382	DDX47	99	90.323	Ursus_americanus
ENSXETG00000022984	ddx47	99	87.168	ENSUMAG00000002358	DDX47	99	87.168	Ursus_maritimus
ENSXETG00000022984	ddx47	73	87.719	ENSVPAG00000012483	-	84	87.719	Vicugna_pacos
ENSXETG00000022984	ddx47	61	97.059	ENSVPAG00000004648	-	54	97.059	Vicugna_pacos
ENSXETG00000022984	ddx47	97	87.810	ENSVVUG00000004697	DDX47	94	87.389	Vulpes_vulpes
ENSXETG00000022984	ddx47	97	84.211	ENSXCOG00000015880	ddx47	95	83.519	Xiphophorus_couchianus
ENSXETG00000022984	ddx47	97	83.982	ENSXMAG00000008268	ddx47	84	83.296	Xiphophorus_maculatus