EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSXETG00000023006 (Gene tree)
Gene ID: -
Gene Symbol: gfi1
Alias: -
Full Name: growth factor independent 1 transcription repressor
Gene Type: protein_coding
Species: Xenopus_tropicalis
Status: putative
Strand: Plus strand
Length: 10119 bases
Position: chrGL172706.1:2803063-2813181
Accession: XB-GENE-960553
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSXETP00000049757	zf-C2H2	PF00096.26	1.2e-29	1	6
ENSXETP00000049757	zf-C2H2	PF00096.26	1.2e-29	2	6
ENSXETP00000049757	zf-C2H2	PF00096.26	1.2e-29	3	6
ENSXETP00000049757	zf-C2H2	PF00096.26	1.2e-29	4	6
ENSXETP00000049757	zf-C2H2	PF00096.26	1.2e-29	5	6
ENSXETP00000049757	zf-C2H2	PF00096.26	1.2e-29	6	6
ENSXETP00000049757	zf-met	PF12874.7	3.8e-07	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSXETT00000049757	-	1191	-	ENSXETP00000049757	396 (aa)	-	F7DS93

Gene Model

Click here to download ENSXETG00000023006's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSXETG00000023006's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSXETG00000023006	gfi1	59	46.012	ENSXETG00000008801	znf628	96	46.012
ENSXETG00000023006	gfi1	50	42.775	ENSXETG00000013882	-	98	42.775
ENSXETG00000023006	gfi1	53	45.679	ENSXETG00000030307	-	99	45.679
ENSXETG00000023006	gfi1	68	44.048	ENSXETG00000031460	-	87	44.048
ENSXETG00000023006	gfi1	50	44.048	ENSXETG00000024118	-	100	44.048
ENSXETG00000023006	gfi1	50	43.529	ENSXETG00000006490	znf350	88	43.529
ENSXETG00000023006	gfi1	67	46.023	ENSXETG00000016781	-	99	47.059
ENSXETG00000023006	gfi1	67	44.375	ENSXETG00000027149	-	99	44.375
ENSXETG00000023006	gfi1	50	44.886	ENSXETG00000023643	znf484	100	43.750
ENSXETG00000023006	gfi1	51	39.752	ENSXETG00000001911	znf668	95	39.752
ENSXETG00000023006	gfi1	50	43.885	ENSXETG00000025282	-	99	43.885
ENSXETG00000023006	gfi1	54	41.875	ENSXETG00000026673	-	96	41.875
ENSXETG00000023006	gfi1	52	42.262	ENSXETG00000002717	-	99	42.262
ENSXETG00000023006	gfi1	61	42.353	ENSXETG00000034213	-	99	42.353
ENSXETG00000023006	gfi1	50	49.107	ENSXETG00000006575	znf420	76	49.107
ENSXETG00000023006	gfi1	50	43.452	ENSXETG00000016062	znf184	96	43.452
ENSXETG00000023006	gfi1	50	48.171	ENSXETG00000032038	-	92	48.171
ENSXETG00000023006	gfi1	51	36.810	ENSXETG00000001910	znf646	99	38.182
ENSXETG00000023006	gfi1	61	40.367	ENSXETG00000027536	znf574	64	40.367
ENSXETG00000023006	gfi1	69	54.839	ENSXETG00000023597	-	100	54.839

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSXETG00000023006	gfi1	98	66.667	ENSG00000162676	GFI1	100	66.981	Homo_sapiens
ENSXETG00000023006	gfi1	98	65.829	ENSAPOG00000015189	gfi1ab	100	65.578	Acanthochromis_polyacanthus
ENSXETG00000023006	gfi1	98	63.868	ENSACIG00000016354	gfi1ab	100	66.071	Amphilophus_citrinellus
ENSXETG00000023006	gfi1	98	56.633	ENSAOCG00000008339	gfi1ab	100	56.378	Amphiprion_ocellaris
ENSXETG00000023006	gfi1	98	66.332	ENSAPEG00000023870	gfi1ab	100	66.080	Amphiprion_percula
ENSXETG00000023006	gfi1	98	63.000	ENSATEG00000009167	gfi1ab	90	61.905	Anabas_testudineus
ENSXETG00000023006	gfi1	83	72.464	ENSAPLG00000015700	GFI1	98	72.464	Anas_platyrhynchos
ENSXETG00000023006	gfi1	98	69.363	ENSACAG00000004498	GFI1	100	69.608	Anolis_carolinensis
ENSXETG00000023006	gfi1	98	66.745	ENSANAG00000019656	GFI1	100	66.745	Aotus_nancymaae
ENSXETG00000023006	gfi1	98	66.414	ENSACLG00000026458	gfi1ab	93	65.909	Astatotilapia_calliptera
ENSXETG00000023006	gfi1	98	62.921	ENSAMXG00000015228	-	96	62.921	Astyanax_mexicanus
ENSXETG00000023006	gfi1	71	65.188	ENSAMXG00000006669	GFI1	88	65.188	Astyanax_mexicanus
ENSXETG00000023006	gfi1	98	62.189	ENSAMXG00000039600	gfi1ab	100	61.692	Astyanax_mexicanus
ENSXETG00000023006	gfi1	98	66.745	ENSBTAG00000016723	GFI1	100	67.773	Bos_taurus
ENSXETG00000023006	gfi1	98	65.957	ENSCJAG00000017609	GFI1	100	66.274	Callithrix_jacchus
ENSXETG00000023006	gfi1	98	68.322	ENSCAFG00000020155	GFI1	100	68.868	Canis_familiaris
ENSXETG00000023006	gfi1	98	68.322	ENSCAFG00020013371	GFI1	88	68.868	Canis_lupus_dingo
ENSXETG00000023006	gfi1	98	66.981	ENSCHIG00000016135	GFI1	100	67.773	Capra_hircus
ENSXETG00000023006	gfi1	98	66.903	ENSCPOG00000011727	GFI1	100	68.720	Cavia_porcellus
ENSXETG00000023006	gfi1	98	65.721	ENSCCAG00000036072	GFI1	100	66.274	Cebus_capucinus
ENSXETG00000023006	gfi1	98	66.667	ENSCATG00000037873	GFI1	100	66.981	Cercocebus_atys
ENSXETG00000023006	gfi1	98	70.750	ENSCLAG00000005915	GFI1	100	65.517	Chinchilla_lanigera
ENSXETG00000023006	gfi1	96	61.370	ENSCSAG00000001469	GFI1	100	61.749	Chlorocebus_sabaeus
ENSXETG00000023006	gfi1	98	66.430	ENSCANG00000034077	GFI1	100	66.745	Colobus_angolensis_palliatus
ENSXETG00000023006	gfi1	98	65.647	ENSCGRG00001015432	Gfi1	100	67.217	Cricetulus_griseus_chok1gshd
ENSXETG00000023006	gfi1	98	58.134	ENSCSEG00000017729	GFI1	100	59.951	Cynoglossus_semilaevis
ENSXETG00000023006	gfi1	98	59.559	ENSCVAG00000004930	GFI1	100	61.071	Cyprinodon_variegatus
ENSXETG00000023006	gfi1	98	63.846	ENSCVAG00000011828	gfi1ab	100	63.846	Cyprinodon_variegatus
ENSXETG00000023006	gfi1	98	65.012	ENSDARG00000044457	gfi1ab	100	65.012	Danio_rerio
ENSXETG00000023006	gfi1	98	66.981	ENSDNOG00000000782	GFI1	97	68.471	Dasypus_novemcinctus
ENSXETG00000023006	gfi1	98	67.143	ENSEASG00005015509	GFI1	86	68.646	Equus_asinus_asinus
ENSXETG00000023006	gfi1	89	59.585	ENSECAG00000006647	GFI1	92	60.207	Equus_caballus
ENSXETG00000023006	gfi1	98	65.468	ENSEEUG00000000198	GFI1	100	65.468	Erinaceus_europaeus
ENSXETG00000023006	gfi1	98	66.667	ENSELUG00000003015	gfi1ab	99	66.422	Esox_lucius
ENSXETG00000023006	gfi1	98	61.386	ENSELUG00000019033	GFI1	100	61.386	Esox_lucius
ENSXETG00000023006	gfi1	98	67.612	ENSFCAG00000005914	GFI1	100	67.925	Felis_catus
ENSXETG00000023006	gfi1	98	60.628	ENSFHEG00000000341	GFI1	100	61.353	Fundulus_heteroclitus
ENSXETG00000023006	gfi1	98	63.725	ENSFHEG00000010997	gfi1ab	100	62.654	Fundulus_heteroclitus
ENSXETG00000023006	gfi1	98	65.561	ENSGMOG00000007737	gfi1ab	100	65.561	Gadus_morhua
ENSXETG00000023006	gfi1	98	69.042	ENSGALG00000043650	GFI1	100	69.042	Gallus_gallus
ENSXETG00000023006	gfi1	98	62.439	ENSGAFG00000016637	gfi1ab	100	62.195	Gambusia_affinis
ENSXETG00000023006	gfi1	98	58.824	ENSGAFG00000018063	GFI1	100	59.420	Gambusia_affinis
ENSXETG00000023006	gfi1	98	65.394	ENSGACG00000004257	gfi1ab	97	65.394	Gasterosteus_aculeatus
ENSXETG00000023006	gfi1	98	66.667	ENSGGOG00000005320	GFI1	100	66.981	Gorilla_gorilla
ENSXETG00000023006	gfi1	98	66.667	ENSHBUG00000011969	gfi1ab	100	66.162	Haplochromis_burtoni
ENSXETG00000023006	gfi1	99	66.979	ENSHGLG00000008020	GFI1	100	68.171	Heterocephalus_glaber_female
ENSXETG00000023006	gfi1	99	66.979	ENSHGLG00100000610	GFI1	100	68.171	Heterocephalus_glaber_male
ENSXETG00000023006	gfi1	98	56.724	ENSHCOG00000008590	gfi1ab	100	55.501	Hippocampus_comes
ENSXETG00000023006	gfi1	98	57.568	ENSHCOG00000019555	GFI1	100	57.108	Hippocampus_comes
ENSXETG00000023006	gfi1	98	63.198	ENSIPUG00000010071	gfi1ab	87	63.198	Ictalurus_punctatus
ENSXETG00000023006	gfi1	98	60.988	ENSIPUG00000013414	GFI1	100	61.235	Ictalurus_punctatus
ENSXETG00000023006	gfi1	98	66.274	ENSSTOG00000014583	GFI1	100	67.059	Ictidomys_tridecemlineatus
ENSXETG00000023006	gfi1	98	63.568	ENSKMAG00000003810	gfi1ab	100	63.317	Kryptolebias_marmoratus
ENSXETG00000023006	gfi1	98	65.657	ENSLBEG00000027776	gfi1ab	100	65.414	Labrus_bergylta
ENSXETG00000023006	gfi1	97	45.995	ENSLACG00000017590	-	55	77.778	Latimeria_chalumnae
ENSXETG00000023006	gfi1	98	68.657	ENSLACG00000013362	GFI1	98	68.657	Latimeria_chalumnae
ENSXETG00000023006	gfi1	98	68.905	ENSLOCG00000004711	gfi1ab	100	68.905	Lepisosteus_oculatus
ENSXETG00000023006	gfi1	98	67.229	ENSLAFG00000018346	GFI1	100	67.229	Loxodonta_africana
ENSXETG00000023006	gfi1	98	66.667	ENSMFAG00000045801	GFI1	100	66.981	Macaca_fascicularis
ENSXETG00000023006	gfi1	98	66.667	ENSMNEG00000036338	GFI1	100	66.981	Macaca_nemestrina
ENSXETG00000023006	gfi1	98	66.667	ENSMLEG00000036181	GFI1	100	66.981	Mandrillus_leucophaeus
ENSXETG00000023006	gfi1	98	64.975	ENSMAMG00000008125	gfi1ab	100	64.467	Mastacembelus_armatus
ENSXETG00000023006	gfi1	98	66.162	ENSMZEG00005009895	gfi1ab	100	65.657	Maylandia_zebra
ENSXETG00000023006	gfi1	83	73.099	ENSMGAG00000008187	GFI1	98	73.099	Meleagris_gallopavo
ENSXETG00000023006	gfi1	98	66.038	ENSMICG00000047208	GFI1	100	67.217	Microcebus_murinus
ENSXETG00000023006	gfi1	98	61.578	ENSMMOG00000005556	gfi1ab	100	61.323	Mola_mola
ENSXETG00000023006	gfi1	98	67.765	ENSMODG00000011802	GFI1	100	67.765	Monodelphis_domestica
ENSXETG00000023006	gfi1	98	63.868	ENSMALG00000014672	gfi1ab	100	63.359	Monopterus_albus
ENSXETG00000023006	gfi1	98	66.824	MGP_CAROLIEiJ_G0027508	Gfi1	100	100.000	Mus_caroli
ENSXETG00000023006	gfi1	98	67.136	ENSMUSG00000029275	Gfi1	100	67.136	Mus_musculus
ENSXETG00000023006	gfi1	98	66.588	MGP_PahariEiJ_G0017280	Gfi1	100	100.000	Mus_pahari
ENSXETG00000023006	gfi1	98	66.824	MGP_SPRETEiJ_G0028507	Gfi1	100	66.824	Mus_spretus
ENSXETG00000023006	gfi1	98	71.465	ENSMPUG00000004178	GFI1	97	71.649	Mustela_putorius_furo
ENSXETG00000023006	gfi1	98	66.588	ENSMLUG00000015191	GFI1	97	67.299	Myotis_lucifugus
ENSXETG00000023006	gfi1	98	65.750	ENSNBRG00000015774	gfi1ab	100	65.250	Neolamprologus_brichardi
ENSXETG00000023006	gfi1	83	69.589	ENSNLEG00000010470	GFI1	95	66.244	Nomascus_leucogenys
ENSXETG00000023006	gfi1	98	67.217	ENSOPRG00000001473	GFI1	100	67.217	Ochotona_princeps
ENSXETG00000023006	gfi1	98	65.743	ENSONIG00000019246	gfi1ab	100	65.239	Oreochromis_niloticus
ENSXETG00000023006	gfi1	96	60.598	ENSOCUG00000023553	GFI1	93	60.326	Oryctolagus_cuniculus
ENSXETG00000023006	gfi1	98	61.500	ENSORLG00000005060	GFI1	100	60.741	Oryzias_latipes
ENSXETG00000023006	gfi1	98	61.347	ENSORLG00000013806	gfi1ab	100	61.347	Oryzias_latipes
ENSXETG00000023006	gfi1	98	63.520	ENSORLG00020001602	gfi1ab	100	63.520	Oryzias_latipes_hni
ENSXETG00000023006	gfi1	91	65.232	ENSORLG00020002817	GFI1	100	65.986	Oryzias_latipes_hni
ENSXETG00000023006	gfi1	98	58.780	ENSORLG00015006070	GFI1	100	60.247	Oryzias_latipes_hsok
ENSXETG00000023006	gfi1	98	61.347	ENSOMEG00000016722	GFI1	100	61.692	Oryzias_melastigma
ENSXETG00000023006	gfi1	98	69.054	ENSOGAG00000027913	GFI1	100	69.054	Otolemur_garnettii
ENSXETG00000023006	gfi1	98	69.845	ENSPPAG00000042186	GFI1	100	69.845	Pan_paniscus
ENSXETG00000023006	gfi1	98	67.612	ENSPPRG00000007521	GFI1	100	67.925	Panthera_pardus
ENSXETG00000023006	gfi1	98	66.430	ENSPTRG00000043053	GFI1	100	66.745	Pan_troglodytes
ENSXETG00000023006	gfi1	98	66.667	ENSPANG00000016433	GFI1	100	66.981	Papio_anubis
ENSXETG00000023006	gfi1	98	67.076	ENSPKIG00000004263	GFI1	100	66.585	Paramormyrops_kingsleyae
ENSXETG00000023006	gfi1	83	74.269	ENSPSIG00000008734	GFI1	95	74.269	Pelodiscus_sinensis
ENSXETG00000023006	gfi1	98	64.377	ENSPMGG00000012546	gfi1ab	100	64.377	Periophthalmus_magnuspinnatus
ENSXETG00000023006	gfi1	97	53.368	ENSPMGG00000011041	GFI1	99	53.368	Periophthalmus_magnuspinnatus
ENSXETG00000023006	gfi1	98	69.139	ENSPCIG00000013728	GFI1	100	69.378	Phascolarctos_cinereus
ENSXETG00000023006	gfi1	98	44.040	ENSPFOG00000024581	-	85	44.840	Poecilia_formosa
ENSXETG00000023006	gfi1	98	63.250	ENSPFOG00000023214	gfi1ab	100	63.000	Poecilia_formosa
ENSXETG00000023006	gfi1	98	59.472	ENSPLAG00000005376	GFI1	91	60.680	Poecilia_latipinna
ENSXETG00000023006	gfi1	98	63.250	ENSPLAG00000010879	gfi1ab	100	63.000	Poecilia_latipinna
ENSXETG00000023006	gfi1	98	63.772	ENSPMEG00000013694	gfi1ab	100	63.524	Poecilia_mexicana
ENSXETG00000023006	gfi1	98	59.709	ENSPMEG00000019299	GFI1	100	60.934	Poecilia_mexicana
ENSXETG00000023006	gfi1	98	63.250	ENSPREG00000014097	gfi1ab	100	63.000	Poecilia_reticulata
ENSXETG00000023006	gfi1	98	54.005	ENSPREG00000007997	GFI1	100	54.522	Poecilia_reticulata
ENSXETG00000023006	gfi1	98	55.399	ENSPCAG00000011020	GFI1	100	55.399	Procavia_capensis
ENSXETG00000023006	gfi1	98	65.802	ENSPCOG00000020540	GFI1	100	66.981	Propithecus_coquereli
ENSXETG00000023006	gfi1	98	67.780	ENSPVAG00000006928	GFI1	100	69.762	Pteropus_vampyrus
ENSXETG00000023006	gfi1	98	66.414	ENSPNYG00000021183	gfi1ab	100	65.909	Pundamilia_nyererei
ENSXETG00000023006	gfi1	98	62.437	ENSPNAG00000027258	gfi1ab	100	61.929	Pygocentrus_nattereri
ENSXETG00000023006	gfi1	98	58.603	ENSPNAG00000028014	GFI1	100	58.603	Pygocentrus_nattereri
ENSXETG00000023006	gfi1	98	66.353	ENSRNOG00000002042	Gfi1	100	66.353	Rattus_norvegicus
ENSXETG00000023006	gfi1	98	66.667	ENSRBIG00000036467	GFI1	100	66.981	Rhinopithecus_bieti
ENSXETG00000023006	gfi1	98	66.667	ENSRROG00000031687	GFI1	100	66.981	Rhinopithecus_roxellana
ENSXETG00000023006	gfi1	98	65.957	ENSSBOG00000031300	GFI1	100	66.509	Saimiri_boliviensis_boliviensis
ENSXETG00000023006	gfi1	98	67.500	ENSSFOG00015020295	gfi1	100	66.750	Scleropages_formosus
ENSXETG00000023006	gfi1	98	64.322	ENSSMAG00000002782	gfi1ab	100	63.819	Scophthalmus_maximus
ENSXETG00000023006	gfi1	98	64.796	ENSSDUG00000022410	gfi1ab	100	64.796	Seriola_dumerili
ENSXETG00000023006	gfi1	98	64.796	ENSSLDG00000020163	gfi1ab	100	64.796	Seriola_lalandi_dorsalis
ENSXETG00000023006	gfi1	69	71.631	ENSSPAG00000009140	gfi1ab	97	84.615	Stegastes_partitus
ENSXETG00000023006	gfi1	98	67.143	ENSSSCG00000006902	GFI1	100	68.660	Sus_scrofa
ENSXETG00000023006	gfi1	83	72.566	ENSTGUG00000006060	GFI1	98	72.566	Taeniopygia_guttata
ENSXETG00000023006	gfi1	98	62.843	ENSTRUG00000000415	gfi1ab	100	62.594	Takifugu_rubripes
ENSXETG00000023006	gfi1	98	62.148	ENSTNIG00000000651	gfi1ab	97	62.312	Tetraodon_nigroviridis
ENSXETG00000023006	gfi1	98	67.542	ENSTTRG00000000082	GFI1	100	67.857	Tursiops_truncatus
ENSXETG00000023006	gfi1	98	69.438	ENSUAMG00000021124	GFI1	91	69.682	Ursus_americanus
ENSXETG00000023006	gfi1	84	52.691	ENSXMAG00000009274	GFI1	70	53.352	Xiphophorus_maculatus
ENSXETG00000023006	gfi1	98	63.000	ENSXMAG00000010523	gfi1ab	100	62.750	Xiphophorus_maculatus