EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Orthologs

Description

Ensembl ID: ENSXETG00000023114 (Gene tree)
Gene ID: -
Gene Symbol: SPEN
Alias: KIAA0929|MINT|RBM15C|SHARP
Full Name: spen family transcriptional repressor
Gene Type: protein_coding
Species: Xenopus_tropicalis
Status: putative
Strand: Minus strand
Length: 45367 bases
Position: chrGL172744.1:2644619-2689985
Accession: 17575
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSXETP00000050001	RRM_5	PF13893.6	2.5e-06	1	2
ENSXETP00000050001	RRM_5	PF13893.6	2.5e-06	2	2
ENSXETP00000050001	RRM_1	PF00076.22	9.8e-37	1	3
ENSXETP00000050001	RRM_1	PF00076.22	9.8e-37	2	3
ENSXETP00000050001	RRM_1	PF00076.22	9.8e-37	3	3

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSXETT00000050001	SPEN-201	10564	-	ENSXETP00000050001	3442 (aa)	-	F7AVN0

Gene Model

Click here to download ENSXETG00000023114's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSXETG00000023114's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSXETG00000023114	SPEN	99	56.652	ENSG00000065526	SPEN	97	56.421	Homo_sapiens
ENSXETG00000023114	SPEN	67	79.213	ENSAPOG00000009853	-	90	73.881	Acanthochromis_polyacanthus
ENSXETG00000023114	SPEN	99	57.599	ENSAMEG00000011817	SPEN	97	57.566	Ailuropoda_melanoleuca
ENSXETG00000023114	SPEN	99	61.188	ENSAPLG00000012618	SPEN	100	60.990	Anas_platyrhynchos
ENSXETG00000023114	SPEN	99	55.354	ENSACAG00000013761	SPEN	100	56.333	Anolis_carolinensis
ENSXETG00000023114	SPEN	99	55.889	ENSANAG00000034428	SPEN	96	55.889	Aotus_nancymaae
ENSXETG00000023114	SPEN	51	82.840	ENSACLG00000021433	si:ch1073-335m2.2	72	82.840	Astatotilapia_calliptera
ENSXETG00000023114	SPEN	99	57.017	ENSBTAG00000018729	SPEN	97	57.409	Bos_taurus
ENSXETG00000023114	SPEN	99	55.676	ENSCJAG00000008527	SPEN	97	55.784	Callithrix_jacchus
ENSXETG00000023114	SPEN	88	55.588	ENSCAFG00000016132	-	94	55.956	Canis_familiaris
ENSXETG00000023114	SPEN	99	57.790	ENSCHIG00000025070	SPEN	97	57.761	Capra_hircus
ENSXETG00000023114	SPEN	91	58.306	ENSTSYG00000036016	SPEN	97	58.306	Carlito_syrichta
ENSXETG00000023114	SPEN	99	53.363	ENSCAPG00000013803	SPEN	100	54.062	Cavia_aperea
ENSXETG00000023114	SPEN	96	53.852	ENSCPOG00000014036	SPEN	96	54.785	Cavia_porcellus
ENSXETG00000023114	SPEN	99	55.889	ENSCCAG00000020258	SPEN	97	56.197	Cebus_capucinus
ENSXETG00000023114	SPEN	95	91.852	ENSCATG00000015079	SPEN	97	91.176	Cercocebus_atys
ENSXETG00000023114	SPEN	99	53.499	ENSCLAG00000002018	SPEN	100	53.740	Chinchilla_lanigera
ENSXETG00000023114	SPEN	99	55.822	ENSCSAG00000000841	SPEN	97	56.531	Chlorocebus_sabaeus
ENSXETG00000023114	SPEN	100	62.357	ENSCPBG00000010477	SPEN	100	62.235	Chrysemys_picta_bellii
ENSXETG00000023114	SPEN	99	55.923	ENSCANG00000034547	SPEN	97	55.829	Colobus_angolensis_palliatus
ENSXETG00000023114	SPEN	99	56.479	ENSCGRG00001007725	Spen	97	56.210	Cricetulus_griseus_chok1gshd
ENSXETG00000023114	SPEN	91	56.587	ENSCGRG00000010581	Spen	97	56.103	Cricetulus_griseus_crigri
ENSXETG00000023114	SPEN	69	84.615	ENSCVAG00000009075	si:ch1073-335m2.2	51	84.615	Cyprinodon_variegatus
ENSXETG00000023114	SPEN	100	42.994	ENSDARG00000074245	spen	100	82.963	Danio_rerio
ENSXETG00000023114	SPEN	54	72.330	ENSDARG00000074332	si:ch1073-335m2.2	54	72.330	Danio_rerio
ENSXETG00000023114	SPEN	99	57.298	ENSDNOG00000041948	SPEN	97	57.298	Dasypus_novemcinctus
ENSXETG00000023114	SPEN	68	86.134	ENSETEG00000016692	-	64	86.134	Echinops_telfairi
ENSXETG00000023114	SPEN	95	91.852	ENSEASG00005015911	SPEN	96	91.852	Equus_asinus_asinus
ENSXETG00000023114	SPEN	95	91.852	ENSECAG00000008833	SPEN	96	91.852	Equus_caballus
ENSXETG00000023114	SPEN	67	95.349	ENSEEUG00000010255	SPEN	72	95.349	Erinaceus_europaeus
ENSXETG00000023114	SPEN	74	85.799	ENSELUG00000007726	si:ch1073-335m2.2	74	85.799	Esox_lucius
ENSXETG00000023114	SPEN	88	60.567	ENSFALG00000003551	SPEN	99	60.689	Ficedula_albicollis
ENSXETG00000023114	SPEN	64	51.622	ENSFHEG00000004544	si:ch1073-335m2.2	58	51.775	Fundulus_heteroclitus
ENSXETG00000023114	SPEN	93	39.730	ENSGMOG00000008397	-	75	43.923	Gadus_morhua
ENSXETG00000023114	SPEN	70	80.226	ENSGMOG00000008156	si:ch1073-335m2.2	52	80.226	Gadus_morhua
ENSXETG00000023114	SPEN	100	61.947	ENSGALG00000036932	SPEN	99	61.977	Gallus_gallus
ENSXETG00000023114	SPEN	100	41.802	ENSGAFG00000015819	-	90	72.348	Gambusia_affinis
ENSXETG00000023114	SPEN	96	77.907	ENSGACG00000001176	si:ch1073-335m2.2	70	77.907	Gasterosteus_aculeatus
ENSXETG00000023114	SPEN	99	73.294	ENSGAGG00000020785	SPEN	100	73.294	Gopherus_agassizii
ENSXETG00000023114	SPEN	99	56.774	ENSGGOG00000012041	SPEN	97	56.573	Gorilla_gorilla
ENSXETG00000023114	SPEN	81	82.840	ENSHBUG00000023253	si:ch1073-335m2.2	76	82.840	Haplochromis_burtoni
ENSXETG00000023114	SPEN	71	64.376	ENSHGLG00000019259	SPEN	74	65.280	Heterocephalus_glaber_female
ENSXETG00000023114	SPEN	69	63.407	ENSHGLG00100019294	SPEN	76	64.353	Heterocephalus_glaber_male
ENSXETG00000023114	SPEN	99	77.778	ENSIPUG00000021668	spen	95	77.049	Ictalurus_punctatus
ENSXETG00000023114	SPEN	99	57.906	ENSSTOG00000021428	SPEN	97	57.809	Ictidomys_tridecemlineatus
ENSXETG00000023114	SPEN	92	56.768	ENSJJAG00000010882	Spen	91	57.428	Jaculus_jaculus
ENSXETG00000023114	SPEN	85	39.730	ENSLBEG00000019129	-	59	37.904	Labrus_bergylta
ENSXETG00000023114	SPEN	94	79.882	ENSLBEG00000020855	si:ch1073-335m2.2	54	79.882	Labrus_bergylta
ENSXETG00000023114	SPEN	61	95.062	ENSLACG00000003258	SPEN	100	56.755	Latimeria_chalumnae
ENSXETG00000023114	SPEN	90	49.203	ENSLOCG00000007896	si:ch1073-335m2.2	100	50.376	Lepisosteus_oculatus
ENSXETG00000023114	SPEN	99	56.366	ENSLAFG00000004524	SPEN	97	56.209	Loxodonta_africana
ENSXETG00000023114	SPEN	99	55.948	ENSMFAG00000041974	SPEN	97	56.637	Macaca_fascicularis
ENSXETG00000023114	SPEN	99	55.985	ENSMMUG00000008026	SPEN	97	56.674	Macaca_mulatta
ENSXETG00000023114	SPEN	99	56.001	ENSMNEG00000042402	SPEN	97	56.690	Macaca_nemestrina
ENSXETG00000023114	SPEN	99	55.298	ENSMLEG00000039293	SPEN	97	55.985	Mandrillus_leucophaeus
ENSXETG00000023114	SPEN	51	82.840	ENSMZEG00005011762	si:ch1073-335m2.2	72	82.840	Maylandia_zebra
ENSXETG00000023114	SPEN	56	59.073	ENSMAUG00000008318	Spen	56	59.030	Mesocricetus_auratus
ENSXETG00000023114	SPEN	99	57.454	ENSMICG00000030994	SPEN	97	57.785	Microcebus_murinus
ENSXETG00000023114	SPEN	99	57.625	ENSMOCG00000016083	Spen	97	57.359	Microtus_ochrogaster
ENSXETG00000023114	SPEN	73	75.510	ENSMMOG00000021742	si:ch1073-335m2.2	73	75.510	Mola_mola
ENSXETG00000023114	SPEN	100	57.867	ENSMODG00000003411	SPEN	100	58.100	Monodelphis_domestica
ENSXETG00000023114	SPEN	99	57.506	MGP_CAROLIEiJ_G0026745	Spen	97	56.638	Mus_caroli
ENSXETG00000023114	SPEN	99	56.911	ENSMUSG00000040761	Spen	97	56.652	Mus_musculus
ENSXETG00000023114	SPEN	99	57.143	MGP_PahariEiJ_G0029076	Spen	97	56.882	Mus_pahari
ENSXETG00000023114	SPEN	99	57.638	MGP_SPRETEiJ_G0027724	Spen	97	57.374	Mus_spretus
ENSXETG00000023114	SPEN	98	57.003	ENSMPUG00000016317	SPEN	96	56.973	Mustela_putorius_furo
ENSXETG00000023114	SPEN	92	95.699	ENSMLUG00000010144	SPEN	93	95.699	Myotis_lucifugus
ENSXETG00000023114	SPEN	95	57.745	ENSNGAG00000000641	Spen	99	58.078	Nannospalax_galili
ENSXETG00000023114	SPEN	87	82.840	ENSNBRG00000005733	si:ch1073-335m2.2	72	82.840	Neolamprologus_brichardi
ENSXETG00000023114	SPEN	99	56.004	ENSNLEG00000007652	SPEN	96	56.110	Nomascus_leucogenys
ENSXETG00000023114	SPEN	91	93.750	ENSMEUG00000002422	SPEN	91	93.750	Notamacropus_eugenii
ENSXETG00000023114	SPEN	84	62.691	ENSOPRG00000015800	SPEN	82	64.126	Ochotona_princeps
ENSXETG00000023114	SPEN	100	53.681	ENSODEG00000016644	SPEN	100	54.109	Octodon_degus
ENSXETG00000023114	SPEN	68	44.642	ENSONIG00000006573	-	99	63.702	Oreochromis_niloticus
ENSXETG00000023114	SPEN	100	40.538	ENSORLG00015022085	-	73	47.406	Oryzias_latipes_hsok
ENSXETG00000023114	SPEN	100	39.745	ENSOMEG00000007639	-	73	46.986	Oryzias_melastigma
ENSXETG00000023114	SPEN	50	80.982	ENSOMEG00000004509	si:ch1073-335m2.2	52	80.982	Oryzias_melastigma
ENSXETG00000023114	SPEN	99	56.801	ENSOGAG00000025110	SPEN	97	56.910	Otolemur_garnettii
ENSXETG00000023114	SPEN	99	57.519	ENSOARG00000008477	SPEN	97	57.519	Ovis_aries
ENSXETG00000023114	SPEN	99	56.652	ENSPPAG00000035690	SPEN	97	56.303	Pan_paniscus
ENSXETG00000023114	SPEN	99	56.652	ENSPTRG00000000210	SPEN	97	56.427	Pan_troglodytes
ENSXETG00000023114	SPEN	99	55.261	ENSPANG00000006293	SPEN	97	55.948	Papio_anubis
ENSXETG00000023114	SPEN	95	96.429	ENSPKIG00000010492	si:ch1073-335m2.2	96	53.169	Paramormyrops_kingsleyae
ENSXETG00000023114	SPEN	100	44.713	ENSPKIG00000002617	SPEN	90	74.906	Paramormyrops_kingsleyae
ENSXETG00000023114	SPEN	99	60.642	ENSPSIG00000008026	SPEN	100	60.554	Pelodiscus_sinensis
ENSXETG00000023114	SPEN	99	56.865	ENSPEMG00000022997	Spen	97	56.865	Peromyscus_maniculatus_bairdii
ENSXETG00000023114	SPEN	70	84.615	ENSPFOG00000017986	si:ch1073-335m2.2	52	84.615	Poecilia_formosa
ENSXETG00000023114	SPEN	70	84.615	ENSPLAG00000016625	si:ch1073-335m2.2	52	84.615	Poecilia_latipinna
ENSXETG00000023114	SPEN	70	84.615	ENSPMEG00000002674	si:ch1073-335m2.2	52	84.615	Poecilia_mexicana
ENSXETG00000023114	SPEN	100	41.762	ENSPMEG00000006764	-	90	71.970	Poecilia_mexicana
ENSXETG00000023114	SPEN	100	41.459	ENSPREG00000010399	-	90	72.727	Poecilia_reticulata
ENSXETG00000023114	SPEN	79	84.615	ENSPREG00000005357	si:ch1073-335m2.2	52	84.615	Poecilia_reticulata
ENSXETG00000023114	SPEN	99	56.667	ENSPPYG00000001834	SPEN	97	56.667	Pongo_abelii
ENSXETG00000023114	SPEN	88	70.357	ENSPCAG00000009543	SPEN	88	69.965	Procavia_capensis
ENSXETG00000023114	SPEN	99	57.393	ENSPCOG00000021735	SPEN	97	57.393	Propithecus_coquereli
ENSXETG00000023114	SPEN	72	64.863	ENSPVAG00000013794	SPEN	70	66.225	Pteropus_vampyrus
ENSXETG00000023114	SPEN	87	82.840	ENSPNYG00000009042	si:ch1073-335m2.2	72	82.840	Pundamilia_nyererei
ENSXETG00000023114	SPEN	99	80.226	ENSPNAG00000020795	spen	86	75.188	Pygocentrus_nattereri
ENSXETG00000023114	SPEN	69	81.977	ENSPNAG00000011452	si:ch1073-335m2.2	51	81.977	Pygocentrus_nattereri
ENSXETG00000023114	SPEN	99	56.452	ENSRNOG00000033556	Spen	97	56.452	Rattus_norvegicus
ENSXETG00000023114	SPEN	99	57.612	ENSRBIG00000039654	SPEN	97	57.612	Rhinopithecus_bieti
ENSXETG00000023114	SPEN	99	55.949	ENSRROG00000035686	SPEN	97	56.163	Rhinopithecus_roxellana
ENSXETG00000023114	SPEN	99	56.150	ENSSBOG00000028770	SPEN	96	56.264	Saimiri_boliviensis_boliviensis
ENSXETG00000023114	SPEN	99	57.056	ENSSHAG00000004960	SPEN	99	70.132	Sarcophilus_harrisii
ENSXETG00000023114	SPEN	69	82.840	ENSSMAG00000000125	si:ch1073-335m2.2	51	82.840	Scophthalmus_maximus
ENSXETG00000023114	SPEN	99	80.337	ENSSDUG00000003476	-	90	74.627	Seriola_dumerili
ENSXETG00000023114	SPEN	99	80.337	ENSSLDG00000012950	-	90	74.627	Seriola_lalandi_dorsalis
ENSXETG00000023114	SPEN	69	67.811	ENSSLDG00000023347	si:ch1073-335m2.2	54	67.811	Seriola_lalandi_dorsalis
ENSXETG00000023114	SPEN	88	83.810	ENSSPUG00000001866	-	99	83.810	Sphenodon_punctatus
ENSXETG00000023114	SPEN	78	84.024	ENSSPAG00000012454	si:ch1073-335m2.2	51	84.024	Stegastes_partitus
ENSXETG00000023114	SPEN	67	79.775	ENSSPAG00000006014	-	90	74.242	Stegastes_partitus
ENSXETG00000023114	SPEN	85	57.808	ENSSSCG00000034484	SPEN	96	57.808	Sus_scrofa
ENSXETG00000023114	SPEN	100	41.673	ENSTRUG00000024350	-	97	47.841	Takifugu_rubripes
ENSXETG00000023114	SPEN	91	82.249	ENSTNIG00000014666	si:ch1073-335m2.2	74	82.249	Tetraodon_nigroviridis
ENSXETG00000023114	SPEN	97	63.043	ENSTNIG00000010907	-	77	63.406	Tetraodon_nigroviridis
ENSXETG00000023114	SPEN	75	85.500	ENSTBEG00000003628	SPEN	73	85.500	Tupaia_belangeri
ENSXETG00000023114	SPEN	81	83.099	ENSTTRG00000015704	SPEN	77	83.099	Tursiops_truncatus
ENSXETG00000023114	SPEN	99	56.863	ENSUAMG00000009600	SPEN	97	56.833	Ursus_americanus
ENSXETG00000023114	SPEN	99	55.763	ENSUMAG00000021641	SPEN	96	56.271	Ursus_maritimus
ENSXETG00000023114	SPEN	92	96.429	ENSVVUG00000028951	SPEN	96	96.429	Vulpes_vulpes
ENSXETG00000023114	SPEN	89	77.249	ENSXCOG00000004516	si:ch1073-335m2.2	73	77.249	Xiphophorus_couchianus
ENSXETG00000023114	SPEN	100	41.888	ENSXMAG00000021384	-	90	70.455	Xiphophorus_maculatus