EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Orthologs

Description

Ensembl ID: ENSXETG00000023304 (Gene tree)
Gene ID: -
Gene Symbol: trmu
Alias: -
Full Name: tRNA 5-methylaminomethyl-2-thiouridylate methyltransferase
Gene Type: protein_coding
Species: Xenopus_tropicalis
Status: putative
Strand: Minus strand
Length: 24442 bases
Position: chrGL172656.1:3934166-3958607
Accession: XB-GENE-1010591
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSXETP00000050341	tRNA_Me_trans	PF03054.16	4.9e-138	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSXETT00000050341	-	1278	-	ENSXETP00000050341	426 (aa)	-	F6TJB0

Gene Model

Click here to download ENSXETG00000023304's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSXETG00000023304's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSXETG00000023304	trmu	99	73.522	ENSG00000100416	TRMU	100	78.667	Homo_sapiens
ENSXETG00000023304	trmu	96	74.390	ENSAPOG00000014458	trmu	98	74.390	Acanthochromis_polyacanthus
ENSXETG00000023304	trmu	94	75.062	ENSAMEG00000003319	TRMU	96	75.062	Ailuropoda_melanoleuca
ENSXETG00000023304	trmu	94	74.564	ENSACIG00000002101	trmu	96	74.564	Amphilophus_citrinellus
ENSXETG00000023304	trmu	99	73.810	ENSAOCG00000013155	trmu	99	73.810	Amphiprion_ocellaris
ENSXETG00000023304	trmu	99	73.571	ENSAPEG00000013350	trmu	99	73.571	Amphiprion_percula
ENSXETG00000023304	trmu	95	75.990	ENSATEG00000007814	trmu	98	75.990	Anabas_testudineus
ENSXETG00000023304	trmu	91	76.031	ENSAPLG00000016380	TRMU	99	76.031	Anas_platyrhynchos
ENSXETG00000023304	trmu	97	76.755	ENSACAG00000007720	TRMU	99	76.755	Anolis_carolinensis
ENSXETG00000023304	trmu	99	72.813	ENSANAG00000038053	TRMU	99	72.813	Aotus_nancymaae
ENSXETG00000023304	trmu	94	74.564	ENSACLG00000005395	trmu	98	74.595	Astatotilapia_calliptera
ENSXETG00000023304	trmu	93	73.990	ENSAMXG00000005282	trmu	96	73.990	Astyanax_mexicanus
ENSXETG00000023304	trmu	99	73.995	ENSBTAG00000005595	TRMU	99	73.995	Bos_taurus
ENSXETG00000023304	trmu	90	41.476	WBGene00007114	mttu-1	98	41.476	Caenorhabditis_elegans
ENSXETG00000023304	trmu	99	72.275	ENSCJAG00000000198	TRMU	99	72.275	Callithrix_jacchus
ENSXETG00000023304	trmu	96	74.939	ENSCAFG00000000779	TRMU	99	72.813	Canis_familiaris
ENSXETG00000023304	trmu	96	74.939	ENSCAFG00020009184	TRMU	99	72.813	Canis_lupus_dingo
ENSXETG00000023304	trmu	99	73.995	ENSCHIG00000017074	TRMU	99	73.995	Capra_hircus
ENSXETG00000023304	trmu	94	76.500	ENSTSYG00000003853	TRMU	95	76.500	Carlito_syrichta
ENSXETG00000023304	trmu	95	68.632	ENSCAPG00000013034	TRMU	99	68.632	Cavia_aperea
ENSXETG00000023304	trmu	99	72.857	ENSCPOG00000020780	TRMU	99	72.857	Cavia_porcellus
ENSXETG00000023304	trmu	99	72.749	ENSCCAG00000021641	TRMU	99	72.749	Cebus_capucinus
ENSXETG00000023304	trmu	99	73.460	ENSCATG00000032800	TRMU	99	73.460	Cercocebus_atys
ENSXETG00000023304	trmu	99	73.934	ENSCLAG00000017269	TRMU	99	73.934	Chinchilla_lanigera
ENSXETG00000023304	trmu	99	73.697	ENSCSAG00000005279	TRMU	99	73.697	Chlorocebus_sabaeus
ENSXETG00000023304	trmu	91	77.635	ENSCPBG00000011621	TRMU	97	77.635	Chrysemys_picta_bellii
ENSXETG00000023304	trmu	94	45.885	ENSCING00000019371	-	98	45.885	Ciona_intestinalis
ENSXETG00000023304	trmu	99	73.223	ENSCANG00000041645	TRMU	99	73.223	Colobus_angolensis_palliatus
ENSXETG00000023304	trmu	96	73.236	ENSCGRG00001001739	Trmu	98	73.236	Cricetulus_griseus_chok1gshd
ENSXETG00000023304	trmu	96	68.127	ENSCGRG00000002781	Trmu	98	68.127	Cricetulus_griseus_crigri
ENSXETG00000023304	trmu	95	71.429	ENSCSEG00000012382	trmu	97	71.429	Cynoglossus_semilaevis
ENSXETG00000023304	trmu	97	72.222	ENSCVAG00000001366	trmu	99	72.222	Cyprinodon_variegatus
ENSXETG00000023304	trmu	93	71.106	ENSDARG00000043734	trmu	95	71.106	Danio_rerio
ENSXETG00000023304	trmu	62	59.551	ENSDNOG00000047245	-	94	59.551	Dasypus_novemcinctus
ENSXETG00000023304	trmu	95	75.682	ENSDORG00000007455	Trmu	98	75.682	Dipodomys_ordii
ENSXETG00000023304	trmu	88	44.920	FBgn0040337	CG3021	95	45.337	Drosophila_melanogaster
ENSXETG00000023304	trmu	93	55.970	ENSEBUG00000007454	trmu	99	55.970	Eptatretus_burgeri
ENSXETG00000023304	trmu	96	74.939	ENSEASG00005021725	TRMU	99	73.634	Equus_asinus_asinus
ENSXETG00000023304	trmu	96	74.939	ENSECAG00000000467	TRMU	99	73.634	Equus_caballus
ENSXETG00000023304	trmu	68	58.076	ENSEEUG00000000074	-	76	81.481	Erinaceus_europaeus
ENSXETG00000023304	trmu	96	73.966	ENSELUG00000009464	trmu	99	75.339	Esox_lucius
ENSXETG00000023304	trmu	96	75.669	ENSFCAG00000006533	TRMU	99	74.232	Felis_catus
ENSXETG00000023304	trmu	91	76.010	ENSFALG00000010035	TRMU	99	76.010	Ficedula_albicollis
ENSXETG00000023304	trmu	93	72.152	ENSFDAG00000017472	TRMU	98	72.152	Fukomys_damarensis
ENSXETG00000023304	trmu	96	73.415	ENSFHEG00000003162	trmu	98	75.272	Fundulus_heteroclitus
ENSXETG00000023304	trmu	95	64.286	ENSGMOG00000001323	trmu	99	64.286	Gadus_morhua
ENSXETG00000023304	trmu	96	75.656	ENSGALG00000031922	TRMU	99	75.656	Gallus_gallus
ENSXETG00000023304	trmu	96	74.453	ENSGAFG00000013331	trmu	98	74.453	Gambusia_affinis
ENSXETG00000023304	trmu	95	72.506	ENSGACG00000019024	trmu	97	72.506	Gasterosteus_aculeatus
ENSXETG00000023304	trmu	99	73.759	ENSGGOG00000000203	TRMU	99	73.759	Gorilla_gorilla
ENSXETG00000023304	trmu	94	74.314	ENSHBUG00000023421	trmu	98	74.324	Haplochromis_burtoni
ENSXETG00000023304	trmu	99	73.050	ENSHGLG00000009278	TRMU	98	73.050	Heterocephalus_glaber_female
ENSXETG00000023304	trmu	99	73.050	ENSHGLG00100018863	TRMU	98	73.050	Heterocephalus_glaber_male
ENSXETG00000023304	trmu	93	75.377	ENSHCOG00000013459	trmu	96	75.377	Hippocampus_comes
ENSXETG00000023304	trmu	95	73.086	ENSIPUG00000009785	trmu	99	73.086	Ictalurus_punctatus
ENSXETG00000023304	trmu	96	74.209	ENSSTOG00000010993	TRMU	97	74.209	Ictidomys_tridecemlineatus
ENSXETG00000023304	trmu	96	72.506	ENSJJAG00000000667	Trmu	98	72.506	Jaculus_jaculus
ENSXETG00000023304	trmu	95	74.631	ENSKMAG00000008516	trmu	97	74.631	Kryptolebias_marmoratus
ENSXETG00000023304	trmu	95	73.399	ENSLBEG00000018831	trmu	97	73.399	Labrus_bergylta
ENSXETG00000023304	trmu	98	77.458	ENSLACG00000013713	TRMU	99	77.458	Latimeria_chalumnae
ENSXETG00000023304	trmu	98	75.721	ENSLOCG00000016066	trmu	99	75.721	Lepisosteus_oculatus
ENSXETG00000023304	trmu	99	63.915	ENSLAFG00000005129	TRMU	99	63.915	Loxodonta_africana
ENSXETG00000023304	trmu	99	73.697	ENSMFAG00000039767	TRMU	99	73.697	Macaca_fascicularis
ENSXETG00000023304	trmu	99	73.697	ENSMMUG00000000807	TRMU	99	73.697	Macaca_mulatta
ENSXETG00000023304	trmu	99	73.697	ENSMNEG00000028164	TRMU	99	73.697	Macaca_nemestrina
ENSXETG00000023304	trmu	99	73.460	ENSMLEG00000033884	TRMU	99	73.460	Mandrillus_leucophaeus
ENSXETG00000023304	trmu	99	71.905	ENSMAMG00000004717	trmu	99	71.905	Mastacembelus_armatus
ENSXETG00000023304	trmu	94	74.314	ENSMZEG00005015797	trmu	96	74.314	Maylandia_zebra
ENSXETG00000023304	trmu	78	74.854	ENSMGAG00000007550	TRMU	99	74.854	Meleagris_gallopavo
ENSXETG00000023304	trmu	96	72.749	ENSMAUG00000022282	Trmu	98	72.749	Mesocricetus_auratus
ENSXETG00000023304	trmu	99	74.408	ENSMICG00000029046	TRMU	100	74.408	Microcebus_murinus
ENSXETG00000023304	trmu	96	73.236	ENSMOCG00000014641	Trmu	98	73.236	Microtus_ochrogaster
ENSXETG00000023304	trmu	99	71.667	ENSMMOG00000007229	trmu	99	71.667	Mola_mola
ENSXETG00000023304	trmu	96	72.439	ENSMODG00000007433	TRMU	96	72.439	Monodelphis_domestica
ENSXETG00000023304	trmu	95	71.921	ENSMALG00000007721	trmu	97	71.921	Monopterus_albus
ENSXETG00000023304	trmu	96	72.993	MGP_CAROLIEiJ_G0020134	Trmu	98	72.993	Mus_caroli
ENSXETG00000023304	trmu	99	72.038	ENSMUSG00000022386	Trmu	99	72.038	Mus_musculus
ENSXETG00000023304	trmu	99	71.564	MGP_PahariEiJ_G0020139	Trmu	99	71.564	Mus_pahari
ENSXETG00000023304	trmu	99	72.038	MGP_SPRETEiJ_G0021031	Trmu	99	72.038	Mus_spretus
ENSXETG00000023304	trmu	99	73.050	ENSMPUG00000002523	TRMU	99	73.050	Mustela_putorius_furo
ENSXETG00000023304	trmu	95	73.945	ENSNGAG00000005132	Trmu	97	73.945	Nannospalax_galili
ENSXETG00000023304	trmu	95	73.580	ENSNBRG00000022690	trmu	99	73.580	Neolamprologus_brichardi
ENSXETG00000023304	trmu	99	73.759	ENSNLEG00000015773	TRMU	99	73.759	Nomascus_leucogenys
ENSXETG00000023304	trmu	77	61.702	ENSMEUG00000000216	TRMU	99	61.702	Notamacropus_eugenii
ENSXETG00000023304	trmu	99	74.645	ENSODEG00000014745	TRMU	99	74.645	Octodon_degus
ENSXETG00000023304	trmu	94	75.062	ENSONIG00000009821	trmu	96	75.062	Oreochromis_niloticus
ENSXETG00000023304	trmu	91	69.821	ENSOANG00000001891	TRMU	98	69.821	Ornithorhynchus_anatinus
ENSXETG00000023304	trmu	90	74.740	ENSOCUG00000003664	TRMU	97	72.727	Oryctolagus_cuniculus
ENSXETG00000023304	trmu	95	71.712	ENSORLG00000019015	trmu	97	71.712	Oryzias_latipes
ENSXETG00000023304	trmu	95	71.960	ENSORLG00020006830	trmu	97	71.960	Oryzias_latipes_hni
ENSXETG00000023304	trmu	95	71.960	ENSORLG00015003907	trmu	97	71.960	Oryzias_latipes_hsok
ENSXETG00000023304	trmu	57	69.547	ENSOMEG00000015541	trmu	88	69.547	Oryzias_melastigma
ENSXETG00000023304	trmu	94	74.627	ENSOGAG00000008096	TRMU	96	74.627	Otolemur_garnettii
ENSXETG00000023304	trmu	98	68.990	ENSOARG00000019475	TRMU	100	68.990	Ovis_aries
ENSXETG00000023304	trmu	99	73.995	ENSPPAG00000033944	TRMU	99	73.995	Pan_paniscus
ENSXETG00000023304	trmu	96	75.610	ENSPPRG00000004197	TRMU	99	73.995	Panthera_pardus
ENSXETG00000023304	trmu	65	72.662	ENSPTIG00000014122	TRMU	97	74.340	Panthera_tigris_altaica
ENSXETG00000023304	trmu	99	73.995	ENSPTRG00000014510	TRMU	99	73.995	Pan_troglodytes
ENSXETG00000023304	trmu	93	76.010	ENSPANG00000023074	TRMU	97	71.858	Papio_anubis
ENSXETG00000023304	trmu	96	71.845	ENSPKIG00000002849	trmu	99	71.845	Paramormyrops_kingsleyae
ENSXETG00000023304	trmu	89	77.428	ENSPSIG00000013020	TRMU	99	77.428	Pelodiscus_sinensis
ENSXETG00000023304	trmu	96	73.219	ENSPMGG00000004083	trmu	98	73.219	Periophthalmus_magnuspinnatus
ENSXETG00000023304	trmu	96	72.506	ENSPEMG00000014007	Trmu	98	72.506	Peromyscus_maniculatus_bairdii
ENSXETG00000023304	trmu	92	72.821	ENSPCIG00000009923	TRMU	92	72.843	Phascolarctos_cinereus
ENSXETG00000023304	trmu	94	70.050	ENSPFOG00000008197	trmu	90	70.050	Poecilia_formosa
ENSXETG00000023304	trmu	97	72.705	ENSPLAG00000008414	trmu	99	72.705	Poecilia_latipinna
ENSXETG00000023304	trmu	97	72.947	ENSPMEG00000004326	trmu	99	72.947	Poecilia_mexicana
ENSXETG00000023304	trmu	97	72.705	ENSPREG00000007980	trmu	99	72.705	Poecilia_reticulata
ENSXETG00000023304	trmu	99	73.995	ENSPPYG00000011949	TRMU	99	73.995	Pongo_abelii
ENSXETG00000023304	trmu	90	68.146	ENSPCAG00000013462	TRMU	98	68.146	Procavia_capensis
ENSXETG00000023304	trmu	99	73.697	ENSPCOG00000016539	TRMU	100	73.697	Propithecus_coquereli
ENSXETG00000023304	trmu	96	68.780	ENSPVAG00000013202	TRMU	100	67.062	Pteropus_vampyrus
ENSXETG00000023304	trmu	94	74.564	ENSPNYG00000005629	trmu	96	74.564	Pundamilia_nyererei
ENSXETG00000023304	trmu	97	71.256	ENSPNAG00000006339	trmu	97	71.256	Pygocentrus_nattereri
ENSXETG00000023304	trmu	96	72.506	ENSRNOG00000016465	Trmu	98	72.506	Rattus_norvegicus
ENSXETG00000023304	trmu	99	72.512	ENSRBIG00000038973	TRMU	99	72.512	Rhinopithecus_bieti
ENSXETG00000023304	trmu	99	72.749	ENSRROG00000004267	TRMU	99	72.749	Rhinopithecus_roxellana
ENSXETG00000023304	trmu	89	33.000	YDL033C	SLM3	91	33.000	Saccharomyces_cerevisiae
ENSXETG00000023304	trmu	99	72.986	ENSSBOG00000030184	TRMU	99	72.986	Saimiri_boliviensis_boliviensis
ENSXETG00000023304	trmu	86	73.913	ENSSFOG00015020664	trmu	96	73.913	Scleropages_formosus
ENSXETG00000023304	trmu	95	73.580	ENSSMAG00000019450	trmu	97	73.580	Scophthalmus_maximus
ENSXETG00000023304	trmu	95	73.399	ENSSDUG00000011913	trmu	97	73.399	Seriola_dumerili
ENSXETG00000023304	trmu	95	73.645	ENSSLDG00000011684	trmu	97	73.645	Seriola_lalandi_dorsalis
ENSXETG00000023304	trmu	97	66.748	ENSSPUG00000017123	TRMU	98	66.748	Sphenodon_punctatus
ENSXETG00000023304	trmu	95	72.906	ENSSPAG00000021875	trmu	97	72.906	Stegastes_partitus
ENSXETG00000023304	trmu	96	72.616	ENSSSCG00000000007	TRMU	99	71.496	Sus_scrofa
ENSXETG00000023304	trmu	88	79.947	ENSTGUG00000003663	-	100	79.947	Taeniopygia_guttata
ENSXETG00000023304	trmu	96	73.659	ENSTRUG00000001231	trmu	99	73.659	Takifugu_rubripes
ENSXETG00000023304	trmu	96	74.696	ENSTNIG00000010484	trmu	97	74.696	Tetraodon_nigroviridis
ENSXETG00000023304	trmu	77	57.353	ENSTBEG00000011276	-	81	57.353	Tupaia_belangeri
ENSXETG00000023304	trmu	99	73.397	ENSTTRG00000004160	TRMU	99	73.397	Tursiops_truncatus
ENSXETG00000023304	trmu	69	74.061	ENSUAMG00000024825	TRMU	97	74.061	Ursus_americanus
ENSXETG00000023304	trmu	93	62.532	ENSUMAG00000019079	TRMU	97	73.256	Ursus_maritimus
ENSXETG00000023304	trmu	51	64.840	ENSVPAG00000000685	-	99	64.840	Vicugna_pacos
ENSXETG00000023304	trmu	99	73.286	ENSVVUG00000024963	TRMU	99	73.286	Vulpes_vulpes
ENSXETG00000023304	trmu	97	71.838	ENSXCOG00000015105	trmu	99	71.838	Xiphophorus_couchianus
ENSXETG00000023304	trmu	97	73.430	ENSXMAG00000006697	trmu	99	73.430	Xiphophorus_maculatus