EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Orthologs

Description

Ensembl ID: ENSXETG00000023315 (Gene tree)
Gene ID: -
Gene Symbol: dicer1
Alias: -
Full Name: Xenopus tropicalis dicer 1%2C ribonuclease III (dicer1)%2C mRNA.
Gene Type: protein_coding
Species: Xenopus_tropicalis
Status: putative
Strand: Plus strand
Length: 26981 bases
Position: chrGL172821.1:1687987-1714967
Accession: NM_001129918
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSXETP00000050382	Ribonuclease_3	PF00636.26	1e-68	1	2
ENSXETP00000050382	Ribonuclease_3	PF00636.26	1e-68	2	2
ENSXETP00000050382	PAZ	PF02170.22	5.3e-39	1	1
ENSXETP00000050382	Ribonucleas_3_3	PF14622.6	2.1e-23	1	1
ENSXETP00000050382	ResIII	PF04851.15	7e-11	1	1
ENSXETP00000050382	DEAD	PF00270.29	1.9e-11	1	1
ENSXETP00000050382	Dicer_dimer	PF03368.14	4.6e-24	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSXETT00000050382	-	5700	-	ENSXETP00000050382	1899 (aa)	-	F6SRY9

Gene Model

Click here to download ENSXETG00000023315's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSXETG00000023315's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSXETG00000023315	dicer1	99	83.082	ENSG00000100697	DICER1	93	96.923	Homo_sapiens
ENSXETG00000023315	dicer1	99	75.955	ENSAPOG00000020381	dicer1	100	75.723	Acanthochromis_polyacanthus
ENSXETG00000023315	dicer1	99	83.220	ENSAMEG00000006447	DICER1	99	82.856	Ailuropoda_melanoleuca
ENSXETG00000023315	dicer1	95	75.103	ENSACIG00000000890	dicer1	99	75.235	Amphilophus_citrinellus
ENSXETG00000023315	dicer1	99	76.070	ENSAOCG00000023381	dicer1	100	75.734	Amphiprion_ocellaris
ENSXETG00000023315	dicer1	99	75.800	ENSAPEG00000022809	dicer1	100	75.464	Amphiprion_percula
ENSXETG00000023315	dicer1	99	76.541	ENSATEG00000014048	dicer1	100	76.282	Anabas_testudineus
ENSXETG00000023315	dicer1	99	84.035	ENSAPLG00000012407	DICER1	99	83.983	Anas_platyrhynchos
ENSXETG00000023315	dicer1	99	84.054	ENSACAG00000013033	DICER1	99	83.585	Anolis_carolinensis
ENSXETG00000023315	dicer1	99	83.238	ENSANAG00000023622	DICER1	99	82.812	Aotus_nancymaae
ENSXETG00000023315	dicer1	99	75.967	ENSACLG00000007920	dicer1	100	75.464	Astatotilapia_calliptera
ENSXETG00000023315	dicer1	99	78.311	ENSAMXG00000010730	dicer1	100	77.946	Astyanax_mexicanus
ENSXETG00000023315	dicer1	99	82.708	ENSBTAG00000012852	DICER1	99	82.292	Bos_taurus
ENSXETG00000023315	dicer1	88	45.694	WBGene00000939	dcr-1	82	47.949	Caenorhabditis_elegans
ENSXETG00000023315	dicer1	99	83.021	ENSCJAG00000006225	DICER1	99	82.656	Callithrix_jacchus
ENSXETG00000023315	dicer1	99	83.229	ENSCAFG00000017701	DICER1	99	82.865	Canis_familiaris
ENSXETG00000023315	dicer1	99	83.229	ENSCAFG00020014247	DICER1	99	82.865	Canis_lupus_dingo
ENSXETG00000023315	dicer1	99	82.969	ENSCHIG00000015885	DICER1	99	82.552	Capra_hircus
ENSXETG00000023315	dicer1	99	77.930	ENSTSYG00000002044	DICER1	99	77.626	Carlito_syrichta
ENSXETG00000023315	dicer1	96	78.317	ENSCAPG00000000101	DICER1	98	77.940	Cavia_aperea
ENSXETG00000023315	dicer1	99	82.430	ENSCPOG00000004221	DICER1	99	82.013	Cavia_porcellus
ENSXETG00000023315	dicer1	99	83.186	ENSCCAG00000027063	DICER1	99	82.760	Cebus_capucinus
ENSXETG00000023315	dicer1	99	83.125	ENSCATG00000031403	DICER1	99	82.699	Cercocebus_atys
ENSXETG00000023315	dicer1	99	83.368	ENSCLAG00000015000	DICER1	99	82.899	Chinchilla_lanigera
ENSXETG00000023315	dicer1	99	83.125	ENSCSAG00000010696	DICER1	99	82.699	Chlorocebus_sabaeus
ENSXETG00000023315	dicer1	79	78.357	ENSCHOG00000002136	DICER1	89	78.156	Choloepus_hoffmanni
ENSXETG00000023315	dicer1	99	84.254	ENSCPBG00000009859	DICER1	99	88.829	Chrysemys_picta_bellii
ENSXETG00000023315	dicer1	70	41.474	ENSCING00000008383	-	99	44.199	Ciona_intestinalis
ENSXETG00000023315	dicer1	54	77.551	ENSCSAVG00000006137	-	86	77.551	Ciona_savignyi
ENSXETG00000023315	dicer1	99	83.177	ENSCANG00000031429	DICER1	99	82.751	Colobus_angolensis_palliatus
ENSXETG00000023315	dicer1	99	82.221	ENSCGRG00001008088	Dicer1	99	81.908	Cricetulus_griseus_chok1gshd
ENSXETG00000023315	dicer1	99	82.221	ENSCGRG00000012281	Dicer1	99	81.908	Cricetulus_griseus_crigri
ENSXETG00000023315	dicer1	99	75.445	ENSCSEG00000017078	dicer1	100	75.288	Cynoglossus_semilaevis
ENSXETG00000023315	dicer1	99	76.046	ENSCVAG00000020035	dicer1	95	83.242	Cyprinodon_variegatus
ENSXETG00000023315	dicer1	99	77.969	ENSDARG00000001129	dicer1	100	77.610	Danio_rerio
ENSXETG00000023315	dicer1	99	79.948	ENSDNOG00000004190	DICER1	99	79.524	Dasypus_novemcinctus
ENSXETG00000023315	dicer1	99	82.212	ENSDORG00000006215	Dicer1	99	81.794	Dipodomys_ordii
ENSXETG00000023315	dicer1	81	62.887	FBgn0039016	Dcr-1	70	62.887	Drosophila_melanogaster
ENSXETG00000023315	dicer1	91	94.248	ENSETEG00000011000	DICER1	99	95.516	Echinops_telfairi
ENSXETG00000023315	dicer1	95	61.957	ENSEBUG00000013802	dicer1	91	63.052	Eptatretus_burgeri
ENSXETG00000023315	dicer1	99	82.795	ENSEASG00005021485	DICER1	99	82.377	Equus_asinus_asinus
ENSXETG00000023315	dicer1	97	88.621	ENSECAG00000006079	DICER1	99	88.448	Equus_caballus
ENSXETG00000023315	dicer1	56	96.269	ENSEEUG00000003893	-	55	96.269	Erinaceus_europaeus
ENSXETG00000023315	dicer1	99	74.192	ENSELUG00000024317	dicer1	100	74.089	Esox_lucius
ENSXETG00000023315	dicer1	99	82.760	ENSFCAG00000003535	DICER1	99	82.344	Felis_catus
ENSXETG00000023315	dicer1	99	84.359	ENSFALG00000002516	DICER1	99	83.942	Ficedula_albicollis
ENSXETG00000023315	dicer1	99	82.951	ENSFDAG00000021287	DICER1	99	82.377	Fukomys_damarensis
ENSXETG00000023315	dicer1	99	72.636	ENSFHEG00000016839	dicer1	99	71.970	Fundulus_heteroclitus
ENSXETG00000023315	dicer1	86	83.455	ENSGMOG00000006057	dicer1	89	82.865	Gadus_morhua
ENSXETG00000023315	dicer1	91	93.898	ENSGALG00000010999	DICER1	99	93.898	Gallus_gallus
ENSXETG00000023315	dicer1	99	76.008	ENSGAFG00000010728	dicer1	99	75.432	Gambusia_affinis
ENSXETG00000023315	dicer1	99	74.165	ENSGACG00000020134	dicer1	93	80.927	Gasterosteus_aculeatus
ENSXETG00000023315	dicer1	63	82.143	ENSGAGG00000016379	DICER1	99	81.497	Gopherus_agassizii
ENSXETG00000023315	dicer1	99	83.073	ENSGGOG00000003760	DICER1	99	82.708	Gorilla_gorilla
ENSXETG00000023315	dicer1	99	76.019	ENSHBUG00000018941	dicer1	100	75.515	Haplochromis_burtoni
ENSXETG00000023315	dicer1	99	83.055	ENSHGLG00000018124	DICER1	99	82.534	Heterocephalus_glaber_female
ENSXETG00000023315	dicer1	99	83.055	ENSHGLG00100010985	DICER1	99	82.534	Heterocephalus_glaber_male
ENSXETG00000023315	dicer1	99	74.844	ENSHCOG00000015738	dicer1	100	74.688	Hippocampus_comes
ENSXETG00000023315	dicer1	99	75.610	ENSIPUG00000005080	dicer1	100	75.246	Ictalurus_punctatus
ENSXETG00000023315	dicer1	99	83.168	ENSSTOG00000022439	DICER1	100	82.750	Ictidomys_tridecemlineatus
ENSXETG00000023315	dicer1	99	81.842	ENSJJAG00000010766	Dicer1	99	81.426	Jaculus_jaculus
ENSXETG00000023315	dicer1	87	95.516	ENSKMAG00000001429	dicer1	97	95.516	Kryptolebias_marmoratus
ENSXETG00000023315	dicer1	58	83.455	ENSLBEG00000008928	dicer1	100	74.782	Labrus_bergylta
ENSXETG00000023315	dicer1	99	81.113	ENSLACG00000008302	DICER1	99	80.645	Latimeria_chalumnae
ENSXETG00000023315	dicer1	100	78.281	ENSLOCG00000008544	dicer1	99	78.024	Lepisosteus_oculatus
ENSXETG00000023315	dicer1	99	83.368	ENSLAFG00000013632	DICER1	100	82.950	Loxodonta_africana
ENSXETG00000023315	dicer1	99	83.177	ENSMFAG00000002987	DICER1	99	82.699	Macaca_fascicularis
ENSXETG00000023315	dicer1	99	83.177	ENSMMUG00000023305	DICER1	99	82.699	Macaca_mulatta
ENSXETG00000023315	dicer1	99	83.177	ENSMNEG00000021073	DICER1	99	82.699	Macaca_nemestrina
ENSXETG00000023315	dicer1	99	83.125	ENSMLEG00000034800	DICER1	99	82.699	Mandrillus_leucophaeus
ENSXETG00000023315	dicer1	99	75.423	ENSMAMG00000016806	dicer1	100	75.064	Mastacembelus_armatus
ENSXETG00000023315	dicer1	99	75.967	ENSMZEG00005016989	dicer1	100	75.464	Maylandia_zebra
ENSXETG00000023315	dicer1	99	84.227	ENSMGAG00000013207	DICER1	99	83.811	Meleagris_gallopavo
ENSXETG00000023315	dicer1	99	82.160	ENSMAUG00000009936	Dicer1	99	82.065	Mesocricetus_auratus
ENSXETG00000023315	dicer1	99	83.438	ENSMICG00000011690	DICER1	99	82.969	Microcebus_murinus
ENSXETG00000023315	dicer1	99	82.055	ENSMOCG00000018636	Dicer1	99	81.804	Microtus_ochrogaster
ENSXETG00000023315	dicer1	99	76.064	ENSMMOG00000018531	dicer1	100	75.805	Mola_mola
ENSXETG00000023315	dicer1	99	84.071	ENSMODG00000012624	DICER1	99	83.758	Monodelphis_domestica
ENSXETG00000023315	dicer1	99	75.932	ENSMALG00000009445	dicer1	100	75.737	Monopterus_albus
ENSXETG00000023315	dicer1	99	82.279	ENSMUSG00000041415	Dicer1	98	84.328	Mus_musculus
ENSXETG00000023315	dicer1	99	83.177	ENSMPUG00000003130	DICER1	100	82.811	Mustela_putorius_furo
ENSXETG00000023315	dicer1	99	82.063	ENSMLUG00000003991	DICER1	99	81.936	Myotis_lucifugus
ENSXETG00000023315	dicer1	99	81.951	ENSNGAG00000010103	Dicer1	99	81.733	Nannospalax_galili
ENSXETG00000023315	dicer1	98	74.378	ENSNBRG00000022306	dicer1	97	74.007	Neolamprologus_brichardi
ENSXETG00000023315	dicer1	99	83.073	ENSNLEG00000017309	DICER1	99	82.708	Nomascus_leucogenys
ENSXETG00000023315	dicer1	71	98.701	ENSMEUG00000000614	-	77	98.701	Notamacropus_eugenii
ENSXETG00000023315	dicer1	96	95.082	ENSOPRG00000014698	DICER1	96	95.082	Ochotona_princeps
ENSXETG00000023315	dicer1	99	82.951	ENSODEG00000008594	DICER1	99	82.638	Octodon_degus
ENSXETG00000023315	dicer1	99	75.938	ENSONIG00000010424	dicer1	99	75.000	Oreochromis_niloticus
ENSXETG00000023315	dicer1	99	84.567	ENSOANG00000012034	DICER1	99	84.150	Ornithorhynchus_anatinus
ENSXETG00000023315	dicer1	99	80.737	ENSOCUG00000010849	DICER1	99	80.530	Oryctolagus_cuniculus
ENSXETG00000023315	dicer1	84	89.106	ENSORLG00000011022	dicer1	98	78.893	Oryzias_latipes
ENSXETG00000023315	dicer1	99	75.412	ENSORLG00020021795	dicer1	91	88.889	Oryzias_latipes_hni
ENSXETG00000023315	dicer1	58	82.969	ENSORLG00015019667	dicer1	100	74.716	Oryzias_latipes_hsok
ENSXETG00000023315	dicer1	58	82.731	ENSOMEG00000018679	dicer1	59	82.455	Oryzias_melastigma
ENSXETG00000023315	dicer1	93	81.630	ENSOGAG00000010719	DICER1	97	81.295	Otolemur_garnettii
ENSXETG00000023315	dicer1	99	82.760	ENSOARG00000015465	DICER1	99	82.344	Ovis_aries
ENSXETG00000023315	dicer1	99	83.030	ENSPPAG00000035143	DICER1	99	82.604	Pan_paniscus
ENSXETG00000023315	dicer1	99	82.552	ENSPPRG00000001322	DICER1	99	82.135	Panthera_pardus
ENSXETG00000023315	dicer1	99	82.500	ENSPTIG00000008215	DICER1	99	82.083	Panthera_tigris_altaica
ENSXETG00000023315	dicer1	99	83.030	ENSPTRG00000023484	DICER1	99	82.604	Pan_troglodytes
ENSXETG00000023315	dicer1	99	83.177	ENSPANG00000023078	DICER1	99	82.751	Papio_anubis
ENSXETG00000023315	dicer1	99	77.455	ENSPKIG00000019962	dicer1	99	77.248	Paramormyrops_kingsleyae
ENSXETG00000023315	dicer1	99	83.055	ENSPSIG00000010801	DICER1	99	82.795	Pelodiscus_sinensis
ENSXETG00000023315	dicer1	99	76.967	ENSPMGG00000010210	dicer1	100	76.758	Periophthalmus_magnuspinnatus
ENSXETG00000023315	dicer1	99	82.221	ENSPEMG00000014125	Dicer1	99	81.856	Peromyscus_maniculatus_bairdii
ENSXETG00000023315	dicer1	99	83.750	ENSPCIG00000018004	DICER1	99	83.706	Phascolarctos_cinereus
ENSXETG00000023315	dicer1	99	76.292	ENSPFOG00000008531	dicer1	99	75.927	Poecilia_formosa
ENSXETG00000023315	dicer1	99	76.136	ENSPLAG00000008539	dicer1	99	75.770	Poecilia_latipinna
ENSXETG00000023315	dicer1	99	76.449	ENSPMEG00000014284	dicer1	99	76.084	Poecilia_mexicana
ENSXETG00000023315	dicer1	99	75.927	ENSPREG00000012120	dicer1	99	75.561	Poecilia_reticulata
ENSXETG00000023315	dicer1	99	83.030	ENSPPYG00000006112	DICER1	99	82.604	Pongo_abelii
ENSXETG00000023315	dicer1	86	82.935	ENSPCAG00000010828	DICER1	83	92.308	Procavia_capensis
ENSXETG00000023315	dicer1	99	83.490	ENSPCOG00000022909	DICER1	99	83.021	Propithecus_coquereli
ENSXETG00000023315	dicer1	98	75.732	ENSPVAG00000004811	DICER1	100	75.306	Pteropus_vampyrus
ENSXETG00000023315	dicer1	99	76.122	ENSPNYG00000017939	dicer1	100	75.619	Pundamilia_nyererei
ENSXETG00000023315	dicer1	99	78.279	ENSPNAG00000001012	dicer1	100	78.072	Pygocentrus_nattereri
ENSXETG00000023315	dicer1	99	82.325	ENSRNOG00000010711	Dicer1	99	81.908	Rattus_norvegicus
ENSXETG00000023315	dicer1	99	83.177	ENSRBIG00000020932	DICER1	99	82.760	Rhinopithecus_bieti
ENSXETG00000023315	dicer1	99	83.012	ENSRROG00000031891	DICER1	99	82.647	Rhinopithecus_roxellana
ENSXETG00000023315	dicer1	99	83.238	ENSSBOG00000028660	DICER1	99	82.812	Saimiri_boliviensis_boliviensis
ENSXETG00000023315	dicer1	99	83.758	ENSSHAG00000012077	DICER1	99	83.654	Sarcophilus_harrisii
ENSXETG00000023315	dicer1	93	84.040	ENSSFOG00015010804	dicer1	99	83.544	Scleropages_formosus
ENSXETG00000023315	dicer1	99	75.772	ENSSMAG00000015520	dicer1	100	75.528	Scophthalmus_maximus
ENSXETG00000023315	dicer1	99	75.905	ENSSDUG00000021652	dicer1	100	75.814	Seriola_dumerili
ENSXETG00000023315	dicer1	99	73.420	ENSSLDG00000012087	dicer1	100	73.225	Seriola_lalandi_dorsalis
ENSXETG00000023315	dicer1	62	88.710	ENSSARG00000000219	-	59	89.906	Sorex_araneus
ENSXETG00000023315	dicer1	99	84.323	ENSSPUG00000016222	DICER1	99	83.906	Sphenodon_punctatus
ENSXETG00000023315	dicer1	99	76.027	ENSSPAG00000017128	dicer1	100	75.667	Stegastes_partitus
ENSXETG00000023315	dicer1	99	82.436	ENSSSCG00000028225	DICER1	99	82.018	Sus_scrofa
ENSXETG00000023315	dicer1	99	84.150	ENSTGUG00000012658	DICER1	99	83.733	Taeniopygia_guttata
ENSXETG00000023315	dicer1	99	74.974	ENSTRUG00000006156	dicer1	100	75.000	Takifugu_rubripes
ENSXETG00000023315	dicer1	99	74.871	ENSTNIG00000005441	dicer1	99	74.203	Tetraodon_nigroviridis
ENSXETG00000023315	dicer1	95	77.510	ENSTBEG00000012374	DICER1	99	77.126	Tupaia_belangeri
ENSXETG00000023315	dicer1	94	87.375	ENSTTRG00000013044	DICER1	94	87.174	Tursiops_truncatus
ENSXETG00000023315	dicer1	97	82.735	ENSUAMG00000011912	DICER1	99	82.359	Ursus_americanus
ENSXETG00000023315	dicer1	99	82.636	ENSUMAG00000003027	DICER1	100	82.270	Ursus_maritimus
ENSXETG00000023315	dicer1	95	85.054	ENSVPAG00000006817	DICER1	95	84.194	Vicugna_pacos
ENSXETG00000023315	dicer1	99	83.229	ENSVVUG00000018855	DICER1	99	82.865	Vulpes_vulpes
ENSXETG00000023315	dicer1	92	95.089	ENSXCOG00000009353	dicer1	99	95.089	Xiphophorus_couchianus
ENSXETG00000023315	dicer1	99	75.770	ENSXMAG00000015721	dicer1	99	75.248	Xiphophorus_maculatus