EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Orthologs

Description

Ensembl ID: ENSXETG00000023331 (Gene tree)
Gene ID: -
Gene Symbol: urb2
Alias: -
Full Name: URB2 ribosome biogenesis 2 homolog
Gene Type: protein_coding
Species: Xenopus_tropicalis
Status: putative
Strand: Plus strand
Length: 14535 bases
Position: chrGL172638.1:4193624-4208158
Accession: XB-GENE-6035083
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSXETP00000050397	Urb2	PF10441.9	3.1e-23	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSXETT00000050397	-	4581	-	ENSXETP00000050397	1526 (aa)	-	F6S1E5

Gene Model

Click here to download ENSXETG00000023331's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSXETG00000023331's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSXETG00000023331	urb2	100	42.071	ENSG00000135763	URB2	99	65.517	Homo_sapiens
ENSXETG00000023331	urb2	89	33.469	ENSAPOG00000000608	urb2	94	33.469	Acanthochromis_polyacanthus
ENSXETG00000023331	urb2	99	40.789	ENSAMEG00000009206	URB2	99	41.047	Ailuropoda_melanoleuca
ENSXETG00000023331	urb2	99	50.610	ENSAOCG00000019961	urb2	96	50.610	Amphiprion_ocellaris
ENSXETG00000023331	urb2	99	50.610	ENSAPEG00000005263	urb2	96	50.610	Amphiprion_percula
ENSXETG00000023331	urb2	99	33.449	ENSATEG00000020930	urb2	99	33.508	Anabas_testudineus
ENSXETG00000023331	urb2	97	46.291	ENSAPLG00000002998	URB2	100	46.291	Anas_platyrhynchos
ENSXETG00000023331	urb2	100	44.588	ENSACAG00000001285	URB2	100	44.588	Anolis_carolinensis
ENSXETG00000023331	urb2	100	42.471	ENSANAG00000033963	URB2	100	42.471	Aotus_nancymaae
ENSXETG00000023331	urb2	89	32.812	ENSACLG00000009254	urb2	94	32.880	Astatotilapia_calliptera
ENSXETG00000023331	urb2	100	35.577	ENSAMXG00000003474	urb2	100	35.577	Astyanax_mexicanus
ENSXETG00000023331	urb2	99	40.880	ENSBTAG00000010180	URB2	99	40.880	Bos_taurus
ENSXETG00000023331	urb2	95	61.111	ENSCJAG00000010968	URB2	100	61.111	Callithrix_jacchus
ENSXETG00000023331	urb2	100	40.971	ENSCAFG00000012118	URB2	100	41.017	Canis_familiaris
ENSXETG00000023331	urb2	94	39.903	ENSCAFG00020027217	URB2	99	39.903	Canis_lupus_dingo
ENSXETG00000023331	urb2	99	40.772	ENSCHIG00000014513	URB2	99	40.772	Capra_hircus
ENSXETG00000023331	urb2	99	41.123	ENSTSYG00000006924	URB2	99	41.317	Carlito_syrichta
ENSXETG00000023331	urb2	62	47.401	ENSCPOG00000020777	-	98	47.401	Cavia_porcellus
ENSXETG00000023331	urb2	100	42.238	ENSCCAG00000023932	URB2	100	42.238	Cebus_capucinus
ENSXETG00000023331	urb2	100	41.812	ENSCATG00000043366	URB2	100	42.006	Cercocebus_atys
ENSXETG00000023331	urb2	100	40.581	ENSCLAG00000006268	URB2	100	40.581	Chinchilla_lanigera
ENSXETG00000023331	urb2	100	41.877	ENSCSAG00000010599	URB2	100	42.071	Chlorocebus_sabaeus
ENSXETG00000023331	urb2	69	48.726	ENSCHOG00000010163	URB2	70	48.726	Choloepus_hoffmanni
ENSXETG00000023331	urb2	100	49.968	ENSCPBG00000006191	URB2	100	49.968	Chrysemys_picta_bellii
ENSXETG00000023331	urb2	100	41.942	ENSCANG00000023711	URB2	100	42.136	Colobus_angolensis_palliatus
ENSXETG00000023331	urb2	100	40.465	ENSCGRG00001009591	Urb2	100	40.465	Cricetulus_griseus_chok1gshd
ENSXETG00000023331	urb2	100	40.465	ENSCGRG00000011259	Urb2	100	40.465	Cricetulus_griseus_crigri
ENSXETG00000023331	urb2	99	30.838	ENSCSEG00000000299	urb2	99	31.100	Cynoglossus_semilaevis
ENSXETG00000023331	urb2	99	32.644	ENSCVAG00000011011	urb2	99	32.705	Cyprinodon_variegatus
ENSXETG00000023331	urb2	99	36.088	ENSDARG00000003217	urb2	99	53.394	Danio_rerio
ENSXETG00000023331	urb2	97	36.740	ENSDNOG00000043064	URB2	99	37.240	Dasypus_novemcinctus
ENSXETG00000023331	urb2	100	40.698	ENSDORG00000014975	Urb2	100	40.698	Dipodomys_ordii
ENSXETG00000023331	urb2	95	38.732	ENSETEG00000002869	URB2	95	38.732	Echinops_telfairi
ENSXETG00000023331	urb2	99	41.634	ENSEASG00005012060	URB2	99	41.634	Equus_asinus_asinus
ENSXETG00000023331	urb2	93	60.417	ENSECAG00000012338	URB2	99	60.417	Equus_caballus
ENSXETG00000023331	urb2	92	56.944	ENSEEUG00000002669	URB2	92	56.944	Erinaceus_europaeus
ENSXETG00000023331	urb2	99	37.203	ENSELUG00000014647	urb2	99	37.436	Esox_lucius
ENSXETG00000023331	urb2	100	41.135	ENSFCAG00000007662	URB2	100	41.404	Felis_catus
ENSXETG00000023331	urb2	100	45.635	ENSFALG00000003385	URB2	100	45.635	Ficedula_albicollis
ENSXETG00000023331	urb2	100	40.757	ENSFDAG00000021079	URB2	100	40.757	Fukomys_damarensis
ENSXETG00000023331	urb2	99	32.746	ENSFHEG00000010357	urb2	99	32.706	Fundulus_heteroclitus
ENSXETG00000023331	urb2	99	33.440	ENSGMOG00000012459	urb2	100	33.568	Gadus_morhua
ENSXETG00000023331	urb2	100	47.055	ENSGALG00000011101	URB2	100	47.055	Gallus_gallus
ENSXETG00000023331	urb2	99	35.510	ENSGACG00000016179	urb2	99	35.547	Gasterosteus_aculeatus
ENSXETG00000023331	urb2	100	49.679	ENSGAGG00000021879	URB2	100	49.679	Gopherus_agassizii
ENSXETG00000023331	urb2	100	42.071	ENSGGOG00000025643	URB2	100	42.071	Gorilla_gorilla
ENSXETG00000023331	urb2	99	33.372	ENSHBUG00000018469	urb2	99	33.431	Haplochromis_burtoni
ENSXETG00000023331	urb2	97	39.708	ENSHGLG00000016561	URB2	99	39.761	Heterocephalus_glaber_female
ENSXETG00000023331	urb2	91	44.178	ENSHGLG00100001838	URB2	100	39.094	Heterocephalus_glaber_male
ENSXETG00000023331	urb2	99	36.189	ENSIPUG00000020315	urb2	99	36.189	Ictalurus_punctatus
ENSXETG00000023331	urb2	100	40.270	ENSSTOG00000025323	URB2	100	40.270	Ictidomys_tridecemlineatus
ENSXETG00000023331	urb2	100	40.052	ENSJJAG00000011998	Urb2	100	40.052	Jaculus_jaculus
ENSXETG00000023331	urb2	99	32.697	ENSKMAG00000020129	urb2	99	32.757	Kryptolebias_marmoratus
ENSXETG00000023331	urb2	100	45.566	ENSLACG00000002038	URB2	100	45.566	Latimeria_chalumnae
ENSXETG00000023331	urb2	100	39.142	ENSLOCG00000015462	urb2	100	39.078	Lepisosteus_oculatus
ENSXETG00000023331	urb2	99	41.856	ENSLAFG00000012484	URB2	99	41.856	Loxodonta_africana
ENSXETG00000023331	urb2	100	41.683	ENSMFAG00000039905	URB2	100	41.877	Macaca_fascicularis
ENSXETG00000023331	urb2	100	41.748	ENSMMUG00000009509	URB2	100	41.942	Macaca_mulatta
ENSXETG00000023331	urb2	100	41.877	ENSMNEG00000038762	URB2	100	42.071	Macaca_nemestrina
ENSXETG00000023331	urb2	100	41.877	ENSMLEG00000043252	URB2	100	42.071	Mandrillus_leucophaeus
ENSXETG00000023331	urb2	99	32.584	ENSMAMG00000020365	urb2	99	33.120	Mastacembelus_armatus
ENSXETG00000023331	urb2	99	33.275	ENSMZEG00005011027	urb2	99	33.333	Maylandia_zebra
ENSXETG00000023331	urb2	94	43.652	ENSMGAG00000012073	URB2	100	43.652	Meleagris_gallopavo
ENSXETG00000023331	urb2	95	58.333	ENSMAUG00000017980	Urb2	100	58.333	Mesocricetus_auratus
ENSXETG00000023331	urb2	99	41.811	ENSMICG00000033302	URB2	99	41.950	Microcebus_murinus
ENSXETG00000023331	urb2	100	40.155	ENSMOCG00000020369	Urb2	100	40.285	Microtus_ochrogaster
ENSXETG00000023331	urb2	99	33.547	ENSMALG00000006529	urb2	99	33.547	Monopterus_albus
ENSXETG00000023331	urb2	100	40.283	ENSMUSG00000031976	Urb2	100	40.283	Mus_musculus
ENSXETG00000023331	urb2	100	41.462	ENSMPUG00000012438	URB2	100	41.462	Mustela_putorius_furo
ENSXETG00000023331	urb2	100	41.196	ENSNGAG00000016524	Urb2	100	41.234	Nannospalax_galili
ENSXETG00000023331	urb2	100	42.006	ENSNLEG00000014450	URB2	100	42.201	Nomascus_leucogenys
ENSXETG00000023331	urb2	91	53.125	ENSMEUG00000016434	URB2	94	53.125	Notamacropus_eugenii
ENSXETG00000023331	urb2	92	42.717	ENSOPRG00000009906	URB2	92	42.717	Ochotona_princeps
ENSXETG00000023331	urb2	100	41.024	ENSODEG00000005593	URB2	100	41.150	Octodon_degus
ENSXETG00000023331	urb2	99	35.919	ENSONIG00000017078	urb2	99	36.083	Oreochromis_niloticus
ENSXETG00000023331	urb2	100	37.978	ENSOANG00000013732	URB2	100	37.978	Ornithorhynchus_anatinus
ENSXETG00000023331	urb2	99	41.963	ENSOCUG00000010700	URB2	99	42.156	Oryctolagus_cuniculus
ENSXETG00000023331	urb2	99	34.741	ENSORLG00000010915	urb2	99	34.798	Oryzias_latipes
ENSXETG00000023331	urb2	99	35.027	ENSORLG00020003361	urb2	99	35.088	Oryzias_latipes_hni
ENSXETG00000023331	urb2	99	34.597	ENSORLG00015001534	urb2	99	34.898	Oryzias_latipes_hsok
ENSXETG00000023331	urb2	99	34.830	ENSOMEG00000010076	urb2	99	34.949	Oryzias_melastigma
ENSXETG00000023331	urb2	99	40.712	ENSOGAG00000003021	URB2	99	40.777	Otolemur_garnettii
ENSXETG00000023331	urb2	99	40.271	ENSOARG00000003102	URB2	99	40.568	Ovis_aries
ENSXETG00000023331	urb2	100	42.330	ENSPPAG00000040629	URB2	100	42.330	Pan_paniscus
ENSXETG00000023331	urb2	100	41.006	ENSPPRG00000012767	URB2	100	41.275	Panthera_pardus
ENSXETG00000023331	urb2	96	56.061	ENSPTIG00000012577	URB2	100	56.061	Panthera_tigris_altaica
ENSXETG00000023331	urb2	100	42.176	ENSPTRG00000002092	URB2	100	42.176	Pan_troglodytes
ENSXETG00000023331	urb2	100	40.453	ENSPANG00000002245	URB2	100	40.647	Papio_anubis
ENSXETG00000023331	urb2	100	38.496	ENSPKIG00000005787	urb2	100	38.481	Paramormyrops_kingsleyae
ENSXETG00000023331	urb2	100	49.261	ENSPSIG00000002690	URB2	100	49.261	Pelodiscus_sinensis
ENSXETG00000023331	urb2	96	39.919	ENSPEMG00000019551	Urb2	100	39.919	Peromyscus_maniculatus_bairdii
ENSXETG00000023331	urb2	100	44.085	ENSPCIG00000030071	URB2	100	44.351	Phascolarctos_cinereus
ENSXETG00000023331	urb2	99	33.522	ENSPFOG00000014330	urb2	99	33.459	Poecilia_formosa
ENSXETG00000023331	urb2	99	32.535	ENSPLAG00000014654	urb2	99	32.535	Poecilia_latipinna
ENSXETG00000023331	urb2	99	32.697	ENSPMEG00000012356	urb2	99	32.635	Poecilia_mexicana
ENSXETG00000023331	urb2	99	33.456	ENSPREG00000010268	urb2	99	33.456	Poecilia_reticulata
ENSXETG00000023331	urb2	99	42.367	ENSPPYG00000000123	URB2	99	42.561	Pongo_abelii
ENSXETG00000023331	urb2	99	41.440	ENSPCOG00000023537	URB2	99	41.580	Propithecus_coquereli
ENSXETG00000023331	urb2	100	37.194	ENSPVAG00000002108	URB2	100	37.259	Pteropus_vampyrus
ENSXETG00000023331	urb2	89	32.925	ENSPNYG00000016840	urb2	94	32.993	Pundamilia_nyererei
ENSXETG00000023331	urb2	100	36.020	ENSPNAG00000013684	urb2	100	36.020	Pygocentrus_nattereri
ENSXETG00000023331	urb2	100	40.207	ENSRNOG00000026853	Urb2	97	40.207	Rattus_norvegicus
ENSXETG00000023331	urb2	100	41.854	ENSRBIG00000037937	URB2	100	42.048	Rhinopithecus_bieti
ENSXETG00000023331	urb2	100	41.790	ENSRROG00000039854	URB2	100	41.983	Rhinopithecus_roxellana
ENSXETG00000023331	urb2	100	41.758	ENSSBOG00000023055	URB2	100	41.758	Saimiri_boliviensis_boliviensis
ENSXETG00000023331	urb2	100	43.827	ENSSHAG00000014735	URB2	100	44.093	Sarcophilus_harrisii
ENSXETG00000023331	urb2	97	37.020	ENSSFOG00015015432	urb2	98	37.194	Scleropages_formosus
ENSXETG00000023331	urb2	89	32.997	ENSSMAG00000004984	urb2	95	32.997	Scophthalmus_maximus
ENSXETG00000023331	urb2	99	33.506	ENSSDUG00000000902	urb2	99	33.487	Seriola_dumerili
ENSXETG00000023331	urb2	100	47.341	ENSSPUG00000018549	URB2	100	47.274	Sphenodon_punctatus
ENSXETG00000023331	urb2	99	34.563	ENSSPAG00000013632	urb2	99	34.682	Stegastes_partitus
ENSXETG00000023331	urb2	99	40.387	ENSSSCG00000010186	URB2	99	40.387	Sus_scrofa
ENSXETG00000023331	urb2	100	44.821	ENSTGUG00000009990	URB2	100	45.122	Taeniopygia_guttata
ENSXETG00000023331	urb2	99	32.512	ENSTRUG00000008173	urb2	99	32.590	Takifugu_rubripes
ENSXETG00000023331	urb2	91	38.499	ENSTNIG00000017689	urb2	99	33.270	Tetraodon_nigroviridis
ENSXETG00000023331	urb2	94	71.053	ENSTTRG00000014864	URB2	94	71.053	Tursiops_truncatus
ENSXETG00000023331	urb2	99	41.337	ENSUAMG00000015022	URB2	99	41.596	Ursus_americanus
ENSXETG00000023331	urb2	99	41.337	ENSUMAG00000004728	URB2	99	41.596	Ursus_maritimus
ENSXETG00000023331	urb2	50	59.712	ENSVPAG00000001750	-	52	59.712	Vicugna_pacos
ENSXETG00000023331	urb2	100	41.100	ENSVVUG00000006747	URB2	100	41.100	Vulpes_vulpes
ENSXETG00000023331	urb2	99	32.883	ENSXMAG00000015059	urb2	99	32.883	Xiphophorus_maculatus