EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSXETG00000023348 (Gene tree)
Gene ID: -
Gene Symbol: -
Alias: -
Full Name: -
Gene Type: protein_coding
Species: Xenopus_tropicalis
Status: putative
Strand: Plus strand
Length: 2883 bases
Position: chrGL173168.1:435431-438313
Accession: -
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSXETP00000004034	MMR_HSR1	PF01926.23	6.6e-07	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSXETT00000004034	-	2883	-	ENSXETP00000004034	961 (aa)	-	L7N2J5

Gene Model

Click here to download ENSXETG00000023348's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSXETG00000023348's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSXETG00000023348	-	84	54.132	ENSXETG00000015501	-	98	53.938
ENSXETG00000023348	-	83	55.971	ENSXETG00000001959	-	98	55.663
ENSXETG00000023348	-	84	54.809	ENSXETG00000002195	-	100	54.408
ENSXETG00000023348	-	99	54.388	ENSXETG00000012292	-	71	54.388
ENSXETG00000023348	-	84	54.241	ENSXETG00000015515	-	99	54.361

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSXETG00000023348	-	86	39.593	ENSAPOG00000005828	-	97	39.474	Acanthochromis_polyacanthus
ENSXETG00000023348	-	51	53.939	ENSACIG00000016940	-	89	53.939	Amphilophus_citrinellus
ENSXETG00000023348	-	51	43.838	ENSAPEG00000015878	-	91	43.838	Amphiprion_percula
ENSXETG00000023348	-	86	37.395	ENSATEG00000022785	-	92	37.232	Anabas_testudineus
ENSXETG00000023348	-	84	49.571	ENSACLG00000018613	URGCP	93	49.571	Astatotilapia_calliptera
ENSXETG00000023348	-	93	47.357	ENSACLG00000018733	-	62	47.357	Astatotilapia_calliptera
ENSXETG00000023348	-	79	52.852	ENSCPBG00000013662	-	86	52.598	Chrysemys_picta_bellii
ENSXETG00000023348	-	53	49.213	ENSELUG00000011934	-	92	49.213	Esox_lucius
ENSXETG00000023348	-	93	46.030	ENSNBRG00000011044	si:dkey-85k7.12	63	46.079	Neolamprologus_brichardi
ENSXETG00000023348	-	81	48.375	ENSONIG00000015975	-	98	48.375	Oreochromis_niloticus
ENSXETG00000023348	-	100	45.766	ENSPKIG00000012683	-	69	45.308	Paramormyrops_kingsleyae
ENSXETG00000023348	-	99	51.939	ENSPSIG00000012887	-	64	51.735	Pelodiscus_sinensis
ENSXETG00000023348	-	83	52.206	ENSPSIG00000014161	-	99	52.217	Pelodiscus_sinensis
ENSXETG00000023348	-	83	42.944	ENSPFOG00000018178	-	60	43.067	Poecilia_formosa
ENSXETG00000023348	-	85	36.703	ENSPFOG00000020692	-	99	36.582	Poecilia_formosa
ENSXETG00000023348	-	95	43.179	ENSPLAG00000017220	-	61	42.857	Poecilia_latipinna
ENSXETG00000023348	-	55	36.347	ENSPLAG00000016435	-	93	36.398	Poecilia_latipinna
ENSXETG00000023348	-	96	40.421	ENSPMEG00000016889	-	63	40.338	Poecilia_mexicana
ENSXETG00000023348	-	55	36.347	ENSPMEG00000004085	-	93	36.398	Poecilia_mexicana
ENSXETG00000023348	-	85	48.987	ENSPREG00000015355	si:dkey-85k7.12	96	48.568	Poecilia_reticulata
ENSXETG00000023348	-	83	43.926	ENSPREG00000016359	-	91	43.590	Poecilia_reticulata
ENSXETG00000023348	-	96	41.045	ENSPREG00000016392	-	63	48.748	Poecilia_reticulata
ENSXETG00000023348	-	84	37.667	ENSPNYG00000004887	-	92	37.424	Pundamilia_nyererei
ENSXETG00000023348	-	82	40.124	ENSSLDG00000007637	-	97	40.000	Seriola_lalandi_dorsalis