EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSXETG00000023501 (Gene tree)
Gene ID: -
Gene Symbol: xrn2
Alias: -
Full Name: 5'-3' exoribonuclease 2
Gene Type: protein_coding
Species: Xenopus_tropicalis
Status: putative
Strand: Minus strand
Length: 55969 bases
Position: chrGL173122.1:362207-418175
Accession: XB-GENE-993157
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSXETP00000050719	XRN_N	PF03159.18	2.5e-103	1	1
ENSXETP00000063664	XRN_N	PF03159.18	2.8e-103	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSXETT00000050719	-	2829	-	ENSXETP00000050719	931 (aa)	XP_002939479	Q28E00
ENSXETT00000062402	-	2904	-	ENSXETP00000063664	956 (aa)	-	F7DCR1

Gene Model

Click here to download ENSXETG00000023501's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSXETG00000023501's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSXETG00000023501	xrn2	57	45.679	ENSXETG00000000619	xrn1	87	42.051

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSXETG00000023501	xrn2	100	75.078	ENSG00000088930	XRN2	100	74.453	Homo_sapiens
ENSXETG00000023501	xrn2	97	73.056	ENSAPOG00000009818	xrn2	100	71.109	Acanthochromis_polyacanthus
ENSXETG00000023501	xrn2	100	75.208	ENSAMEG00000012581	XRN2	100	74.583	Ailuropoda_melanoleuca
ENSXETG00000023501	xrn2	91	72.654	ENSACIG00000015047	xrn2	95	77.927	Amphilophus_citrinellus
ENSXETG00000023501	xrn2	97	73.589	ENSAOCG00000023632	xrn2	100	71.792	Amphiprion_ocellaris
ENSXETG00000023501	xrn2	97	73.298	ENSAPEG00000014871	xrn2	100	71.617	Amphiprion_percula
ENSXETG00000023501	xrn2	90	76.744	ENSATEG00000001273	xrn2	97	72.505	Anabas_testudineus
ENSXETG00000023501	xrn2	97	74.651	ENSAPLG00000013869	XRN2	99	74.651	Anas_platyrhynchos
ENSXETG00000023501	xrn2	100	73.602	ENSACAG00000005565	XRN2	100	73.602	Anolis_carolinensis
ENSXETG00000023501	xrn2	100	75.104	ENSANAG00000020126	XRN2	100	74.479	Aotus_nancymaae
ENSXETG00000023501	xrn2	90	75.995	ENSACLG00000010522	xrn2	96	76.667	Astatotilapia_calliptera
ENSXETG00000023501	xrn2	100	71.811	ENSAMXG00000018301	xrn2	100	71.811	Astyanax_mexicanus
ENSXETG00000023501	xrn2	100	74.870	ENSBTAG00000011304	XRN2	100	74.244	Bos_taurus
ENSXETG00000023501	xrn2	87	54.343	WBGene00006964	xrn-2	96	50.780	Caenorhabditis_elegans
ENSXETG00000023501	xrn2	100	75.208	ENSCJAG00000005611	XRN2	100	74.583	Callithrix_jacchus
ENSXETG00000023501	xrn2	100	74.974	ENSCAFG00000005185	XRN2	100	74.348	Canis_familiaris
ENSXETG00000023501	xrn2	100	74.974	ENSCAFG00020027479	XRN2	100	74.348	Canis_lupus_dingo
ENSXETG00000023501	xrn2	100	74.557	ENSCHIG00000006921	XRN2	100	73.931	Capra_hircus
ENSXETG00000023501	xrn2	100	74.348	ENSTSYG00000008315	XRN2	100	73.723	Carlito_syrichta
ENSXETG00000023501	xrn2	97	63.287	ENSCAPG00000010773	XRN2	99	63.287	Cavia_aperea
ENSXETG00000023501	xrn2	100	74.974	ENSCPOG00000009407	XRN2	100	74.348	Cavia_porcellus
ENSXETG00000023501	xrn2	100	75.078	ENSCATG00000040350	XRN2	100	74.453	Cercocebus_atys
ENSXETG00000023501	xrn2	100	75.078	ENSCLAG00000013419	XRN2	100	74.453	Chinchilla_lanigera
ENSXETG00000023501	xrn2	100	75.078	ENSCSAG00000011094	XRN2	100	74.453	Chlorocebus_sabaeus
ENSXETG00000023501	xrn2	61	91.935	ENSCHOG00000013404	XRN2	63	91.935	Choloepus_hoffmanni
ENSXETG00000023501	xrn2	100	77.409	ENSCPBG00000023533	XRN2	100	76.891	Chrysemys_picta_bellii
ENSXETG00000023501	xrn2	87	59.162	ENSCING00000022336	-	100	59.330	Ciona_intestinalis
ENSXETG00000023501	xrn2	89	57.986	ENSCSAVG00000011217	-	100	62.209	Ciona_savignyi
ENSXETG00000023501	xrn2	100	75.078	ENSCANG00000040240	XRN2	100	74.453	Colobus_angolensis_palliatus
ENSXETG00000023501	xrn2	98	75.080	ENSCGRG00001010676	Xrn2	100	74.443	Cricetulus_griseus_chok1gshd
ENSXETG00000023501	xrn2	97	73.881	ENSCGRG00000006378	Xrn2	99	73.241	Cricetulus_griseus_crigri
ENSXETG00000023501	xrn2	54	74.901	ENSCSEG00000005628	xrn2	100	74.704	Cynoglossus_semilaevis
ENSXETG00000023501	xrn2	91	73.174	ENSCVAG00000018999	xrn2	98	79.619	Cyprinodon_variegatus
ENSXETG00000023501	xrn2	100	72.170	ENSDARG00000101900	xrn2	96	79.771	Danio_rerio
ENSXETG00000023501	xrn2	100	75.729	ENSDNOG00000001895	XRN2	100	75.104	Dasypus_novemcinctus
ENSXETG00000023501	xrn2	100	73.514	ENSDORG00000005434	Xrn2	100	73.097	Dipodomys_ordii
ENSXETG00000023501	xrn2	87	56.740	FBgn0031868	Rat1	99	53.148	Drosophila_melanogaster
ENSXETG00000023501	xrn2	100	66.805	ENSETEG00000001740	XRN2	92	84.672	Echinops_telfairi
ENSXETG00000023501	xrn2	85	69.175	ENSEBUG00000016136	xrn2	100	69.175	Eptatretus_burgeri
ENSXETG00000023501	xrn2	100	74.948	ENSEASG00005002484	XRN2	100	74.322	Equus_asinus_asinus
ENSXETG00000023501	xrn2	94	92.000	ENSECAG00000018988	XRN2	97	92.000	Equus_caballus
ENSXETG00000023501	xrn2	80	92.000	ENSEEUG00000009265	XRN2	80	92.000	Erinaceus_europaeus
ENSXETG00000023501	xrn2	99	70.298	ENSELUG00000000552	xrn2	99	70.855	Esox_lucius
ENSXETG00000023501	xrn2	100	74.974	ENSFCAG00000007970	XRN2	100	74.348	Felis_catus
ENSXETG00000023501	xrn2	100	74.948	ENSFALG00000004508	XRN2	100	74.214	Ficedula_albicollis
ENSXETG00000023501	xrn2	100	75.391	ENSFDAG00000016311	XRN2	100	74.765	Fukomys_damarensis
ENSXETG00000023501	xrn2	54	72.137	ENSFHEG00000013039	xrn2	98	72.137	Fundulus_heteroclitus
ENSXETG00000023501	xrn2	87	75.892	ENSGMOG00000013436	xrn2	100	75.892	Gadus_morhua
ENSXETG00000023501	xrn2	100	75.208	ENSGALG00000008372	XRN2	100	75.208	Gallus_gallus
ENSXETG00000023501	xrn2	91	75.691	ENSGAFG00000014284	xrn2	92	81.995	Gambusia_affinis
ENSXETG00000023501	xrn2	88	76.098	ENSGACG00000011870	xrn2	96	78.998	Gasterosteus_aculeatus
ENSXETG00000023501	xrn2	100	77.409	ENSGAGG00000004884	XRN2	100	76.891	Gopherus_agassizii
ENSXETG00000023501	xrn2	100	75.078	ENSGGOG00000013738	XRN2	100	74.453	Gorilla_gorilla
ENSXETG00000023501	xrn2	54	76.967	ENSHBUG00000005077	xrn2	96	76.667	Haplochromis_burtoni
ENSXETG00000023501	xrn2	100	73.827	ENSHGLG00000014831	XRN2	100	73.827	Heterocephalus_glaber_female
ENSXETG00000023501	xrn2	100	73.827	ENSHGLG00100013130	XRN2	100	73.827	Heterocephalus_glaber_male
ENSXETG00000023501	xrn2	94	73.737	ENSHCOG00000011994	xrn2	99	69.200	Hippocampus_comes
ENSXETG00000023501	xrn2	100	72.262	ENSIPUG00000006639	xrn2	100	72.262	Ictalurus_punctatus
ENSXETG00000023501	xrn2	100	75.287	ENSSTOG00000000589	XRN2	100	74.661	Ictidomys_tridecemlineatus
ENSXETG00000023501	xrn2	100	75.312	ENSJJAG00000022128	Xrn2	100	74.688	Jaculus_jaculus
ENSXETG00000023501	xrn2	54	83.762	ENSLBEG00000010041	xrn2	100	83.762	Labrus_bergylta
ENSXETG00000023501	xrn2	95	73.422	ENSLACG00000008307	XRN2	99	78.064	Latimeria_chalumnae
ENSXETG00000023501	xrn2	99	72.292	ENSLOCG00000016874	xrn2	99	72.292	Lepisosteus_oculatus
ENSXETG00000023501	xrn2	100	74.661	ENSLAFG00000014624	XRN2	100	74.035	Loxodonta_africana
ENSXETG00000023501	xrn2	100	75.078	ENSMFAG00000038122	XRN2	100	74.453	Macaca_fascicularis
ENSXETG00000023501	xrn2	100	75.078	ENSMMUG00000011405	XRN2	100	74.453	Macaca_mulatta
ENSXETG00000023501	xrn2	100	74.974	ENSMNEG00000040626	XRN2	100	74.348	Macaca_nemestrina
ENSXETG00000023501	xrn2	100	75.078	ENSMLEG00000041897	XRN2	100	74.453	Mandrillus_leucophaeus
ENSXETG00000023501	xrn2	93	76.397	ENSMAMG00000008633	xrn2	96	73.946	Mastacembelus_armatus
ENSXETG00000023501	xrn2	90	77.986	ENSMZEG00005022362	xrn2	98	76.538	Maylandia_zebra
ENSXETG00000023501	xrn2	99	74.062	ENSMGAG00000003196	XRN2	99	74.062	Meleagris_gallopavo
ENSXETG00000023501	xrn2	100	75.104	ENSMAUG00000021842	Xrn2	100	74.479	Mesocricetus_auratus
ENSXETG00000023501	xrn2	100	74.714	ENSMICG00000008126	XRN2	100	74.089	Microcebus_murinus
ENSXETG00000023501	xrn2	100	74.479	ENSMOCG00000012588	Xrn2	100	73.854	Microtus_ochrogaster
ENSXETG00000023501	xrn2	91	75.371	ENSMMOG00000017576	xrn2	96	77.376	Mola_mola
ENSXETG00000023501	xrn2	100	76.096	ENSMODG00000006163	XRN2	100	75.261	Monodelphis_domestica
ENSXETG00000023501	xrn2	90	75.775	ENSMALG00000011355	xrn2	98	75.775	Monopterus_albus
ENSXETG00000023501	xrn2	100	74.351	MGP_CAROLIEiJ_G0024400	Xrn2	100	73.728	Mus_caroli
ENSXETG00000023501	xrn2	100	74.220	ENSMUSG00000027433	Xrn2	100	73.597	Mus_musculus
ENSXETG00000023501	xrn2	100	74.143	MGP_PahariEiJ_G0025843	Xrn2	100	73.520	Mus_pahari
ENSXETG00000023501	xrn2	100	74.220	MGP_SPRETEiJ_G0025318	Xrn2	94	85.714	Mus_spretus
ENSXETG00000023501	xrn2	100	73.873	ENSMPUG00000001198	XRN2	93	73.668	Mustela_putorius_furo
ENSXETG00000023501	xrn2	100	75.391	ENSMLUG00000001536	XRN2	100	74.765	Myotis_lucifugus
ENSXETG00000023501	xrn2	100	75.104	ENSNGAG00000018138	Xrn2	100	74.479	Nannospalax_galili
ENSXETG00000023501	xrn2	90	78.195	ENSNBRG00000008062	xrn2	96	78.195	Neolamprologus_brichardi
ENSXETG00000023501	xrn2	100	74.974	ENSNLEG00000009991	XRN2	100	74.348	Nomascus_leucogenys
ENSXETG00000023501	xrn2	66	95.556	ENSMEUG00000008622	-	67	95.556	Notamacropus_eugenii
ENSXETG00000023501	xrn2	75	75.916	ENSOPRG00000001397	-	77	75.916	Ochotona_princeps
ENSXETG00000023501	xrn2	100	75.078	ENSODEG00000010745	-	100	74.453	Octodon_degus
ENSXETG00000023501	xrn2	97	68.947	ENSODEG00000000860	-	99	68.947	Octodon_degus
ENSXETG00000023501	xrn2	100	72.182	ENSONIG00000018720	xrn2	100	72.182	Oreochromis_niloticus
ENSXETG00000023501	xrn2	100	75.052	ENSOANG00000015673	XRN2	100	75.052	Ornithorhynchus_anatinus
ENSXETG00000023501	xrn2	100	75.182	ENSOCUG00000013468	XRN2	100	74.557	Oryctolagus_cuniculus
ENSXETG00000023501	xrn2	98	72.063	ENSORLG00000017213	xrn2	96	76.663	Oryzias_latipes
ENSXETG00000023501	xrn2	99	71.882	ENSORLG00020001824	xrn2	100	70.133	Oryzias_latipes_hni
ENSXETG00000023501	xrn2	90	76.313	ENSORLG00015019747	xrn2	100	69.239	Oryzias_latipes_hsok
ENSXETG00000023501	xrn2	90	77.130	ENSOMEG00000019820	xrn2	100	70.355	Oryzias_melastigma
ENSXETG00000023501	xrn2	100	74.688	ENSOGAG00000001068	XRN2	100	74.062	Otolemur_garnettii
ENSXETG00000023501	xrn2	97	74.090	ENSOARG00000004443	XRN2	100	73.448	Ovis_aries
ENSXETG00000023501	xrn2	100	75.078	ENSPPAG00000033549	XRN2	100	74.453	Pan_paniscus
ENSXETG00000023501	xrn2	100	74.974	ENSPPRG00000008732	XRN2	100	74.348	Panthera_pardus
ENSXETG00000023501	xrn2	97	74.518	ENSPTIG00000015683	XRN2	97	73.876	Panthera_tigris_altaica
ENSXETG00000023501	xrn2	100	75.078	ENSPTRG00000013308	XRN2	100	74.453	Pan_troglodytes
ENSXETG00000023501	xrn2	100	75.078	ENSPANG00000018088	XRN2	100	74.453	Papio_anubis
ENSXETG00000023501	xrn2	100	70.540	ENSPKIG00000016889	xrn2	100	70.787	Paramormyrops_kingsleyae
ENSXETG00000023501	xrn2	81	81.948	ENSPSIG00000014666	XRN2	100	80.909	Pelodiscus_sinensis
ENSXETG00000023501	xrn2	100	74.506	ENSPEMG00000000111	Xrn2	100	73.881	Peromyscus_maniculatus_bairdii
ENSXETG00000023501	xrn2	100	71.458	ENSPFOG00000004182	xrn2	99	71.739	Poecilia_formosa
ENSXETG00000023501	xrn2	90	76.402	ENSPLAG00000007351	xrn2	95	76.402	Poecilia_latipinna
ENSXETG00000023501	xrn2	94	69.029	ENSPMEG00000011798	xrn2	99	69.684	Poecilia_mexicana
ENSXETG00000023501	xrn2	90	76.402	ENSPREG00000012452	xrn2	99	74.494	Poecilia_reticulata
ENSXETG00000023501	xrn2	100	74.661	ENSPPYG00000010755	XRN2	100	74.035	Pongo_abelii
ENSXETG00000023501	xrn2	100	71.384	ENSPCAG00000011191	XRN2	100	70.820	Procavia_capensis
ENSXETG00000023501	xrn2	100	68.054	ENSPCOG00000016468	XRN2	100	67.846	Propithecus_coquereli
ENSXETG00000023501	xrn2	93	69.982	ENSPVAG00000004596	XRN2	93	68.897	Pteropus_vampyrus
ENSXETG00000023501	xrn2	90	75.995	ENSPNYG00000001765	xrn2	96	75.995	Pundamilia_nyererei
ENSXETG00000023501	xrn2	99	70.829	ENSPNAG00000010956	xrn2	99	70.829	Pygocentrus_nattereri
ENSXETG00000023501	xrn2	100	74.845	ENSRNOG00000011785	Xrn2	100	74.224	Rattus_norvegicus
ENSXETG00000023501	xrn2	87	80.024	ENSRBIG00000036193	XRN2	100	79.537	Rhinopithecus_bieti
ENSXETG00000023501	xrn2	100	75.078	ENSRROG00000044400	XRN2	90	74.974	Rhinopithecus_roxellana
ENSXETG00000023501	xrn2	73	51.570	YOR048C	RAT1	75	53.511	Saccharomyces_cerevisiae
ENSXETG00000023501	xrn2	100	75.208	ENSSBOG00000021014	XRN2	100	74.583	Saimiri_boliviensis_boliviensis
ENSXETG00000023501	xrn2	99	71.355	ENSSFOG00015001091	xrn2	99	71.355	Scleropages_formosus
ENSXETG00000023501	xrn2	93	74.775	ENSSMAG00000007834	xrn2	100	69.657	Scophthalmus_maximus
ENSXETG00000023501	xrn2	91	75.029	ENSSDUG00000012802	xrn2	99	74.146	Seriola_dumerili
ENSXETG00000023501	xrn2	94	76.678	ENSSLDG00000021273	xrn2	99	76.678	Seriola_lalandi_dorsalis
ENSXETG00000023501	xrn2	77	92.000	ENSSARG00000005859	-	76	92.000	Sorex_araneus
ENSXETG00000023501	xrn2	98	72.756	ENSSPUG00000005485	XRN2	94	71.672	Sphenodon_punctatus
ENSXETG00000023501	xrn2	97	73.269	ENSSPAG00000016027	xrn2	99	71.502	Stegastes_partitus
ENSXETG00000023501	xrn2	100	73.618	ENSSSCG00000007109	XRN2	100	72.993	Sus_scrofa
ENSXETG00000023501	xrn2	100	73.563	ENSTGUG00000007535	XRN2	100	72.832	Taeniopygia_guttata
ENSXETG00000023501	xrn2	91	76.616	ENSTRUG00000015489	xrn2	100	69.293	Takifugu_rubripes
ENSXETG00000023501	xrn2	100	70.600	ENSTNIG00000010712	xrn2	100	70.600	Tetraodon_nigroviridis
ENSXETG00000023501	xrn2	100	74.530	ENSTBEG00000004119	XRN2	100	73.904	Tupaia_belangeri
ENSXETG00000023501	xrn2	93	82.226	ENSTTRG00000009087	XRN2	93	81.149	Tursiops_truncatus
ENSXETG00000023501	xrn2	100	75.312	ENSUAMG00000024634	XRN2	99	89.781	Ursus_americanus
ENSXETG00000023501	xrn2	97	74.866	ENSUMAG00000004012	XRN2	95	74.225	Ursus_maritimus
ENSXETG00000023501	xrn2	89	69.285	ENSVPAG00000010694	XRN2	91	69.285	Vicugna_pacos
ENSXETG00000023501	xrn2	100	75.078	ENSVVUG00000012178	XRN2	100	74.453	Vulpes_vulpes
ENSXETG00000023501	xrn2	99	69.525	ENSXMAG00000000242	xrn2	92	82.238	Xiphophorus_maculatus