EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Orthologs

Description

Ensembl ID: ENSXETG00000023546 (Gene tree)
Gene ID: -
Gene Symbol: rpusd3
Alias: -
Full Name: RNA pseudouridine synthase D3
Gene Type: protein_coding
Species: Xenopus_tropicalis
Status: putative
Strand: Plus strand
Length: 9648 bases
Position: chrGL172680.1:17538-27185
Accession: XB-GENE-982810
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSXETP00000050806	PseudoU_synth_2	PF00849.22	7.3e-11	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSXETT00000050806	-	1094	-	ENSXETP00000050806	283 (aa)	-	F6TFI0

Gene Model

Click here to download ENSXETG00000023546's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSXETG00000023546's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSXETG00000023546	rpusd3	99	50.178	ENSG00000156990	RPUSD3	85	48.000	Homo_sapiens
ENSXETG00000023546	rpusd3	99	48.399	ENSAMEG00000016227	RPUSD3	79	48.399	Ailuropoda_melanoleuca
ENSXETG00000023546	rpusd3	99	52.143	ENSACAG00000009836	RPUSD3	79	52.143	Anolis_carolinensis
ENSXETG00000023546	rpusd3	72	39.070	ENSANAG00000007127	-	80	35.465	Aotus_nancymaae
ENSXETG00000023546	rpusd3	62	49.153	ENSANAG00000019945	-	71	49.153	Aotus_nancymaae
ENSXETG00000023546	rpusd3	61	49.133	ENSANAG00000038118	-	83	49.133	Aotus_nancymaae
ENSXETG00000023546	rpusd3	99	49.291	ENSBTAG00000007968	RPUSD3	81	49.291	Bos_taurus
ENSXETG00000023546	rpusd3	99	48.227	ENSCAFG00000029733	RPUSD3	80	48.227	Canis_familiaris
ENSXETG00000023546	rpusd3	99	48.227	ENSCAFG00020008582	RPUSD3	85	48.227	Canis_lupus_dingo
ENSXETG00000023546	rpusd3	99	49.645	ENSCHIG00000026027	RPUSD3	84	49.645	Capra_hircus
ENSXETG00000023546	rpusd3	87	49.398	ENSTSYG00000009994	RPUSD3	73	48.594	Carlito_syrichta
ENSXETG00000023546	rpusd3	92	46.947	ENSCAPG00000017559	RPUSD3	98	46.947	Cavia_aperea
ENSXETG00000023546	rpusd3	93	46.768	ENSCPOG00000037956	RPUSD3	78	45.000	Cavia_porcellus
ENSXETG00000023546	rpusd3	99	51.064	ENSCCAG00000029530	RPUSD3	81	50.867	Cebus_capucinus
ENSXETG00000023546	rpusd3	99	50.178	ENSCATG00000036939	RPUSD3	81	49.711	Cercocebus_atys
ENSXETG00000023546	rpusd3	99	49.291	ENSCSAG00000010506	RPUSD3	80	49.291	Chlorocebus_sabaeus
ENSXETG00000023546	rpusd3	88	56.000	ENSCPBG00000008825	RPUSD3	93	56.400	Chrysemys_picta_bellii
ENSXETG00000023546	rpusd3	99	49.822	ENSCANG00000040711	RPUSD3	81	49.711	Colobus_angolensis_palliatus
ENSXETG00000023546	rpusd3	98	46.043	ENSCGRG00001004923	Rpusd3	76	46.043	Cricetulus_griseus_chok1gshd
ENSXETG00000023546	rpusd3	98	46.043	ENSCGRG00000018315	Rpusd3	80	46.043	Cricetulus_griseus_crigri
ENSXETG00000023546	rpusd3	99	48.936	ENSDNOG00000039160	RPUSD3	74	48.936	Dasypus_novemcinctus
ENSXETG00000023546	rpusd3	92	47.744	ENSDORG00000026827	Rpusd3	92	47.744	Dipodomys_ordii
ENSXETG00000023546	rpusd3	99	44.840	ENSETEG00000006538	RPUSD3	79	44.840	Echinops_telfairi
ENSXETG00000023546	rpusd3	81	39.565	ENSEBUG00000015605	RPUSD3	75	39.565	Eptatretus_burgeri
ENSXETG00000023546	rpusd3	99	50.355	ENSEASG00005014160	RPUSD3	78	50.355	Equus_asinus_asinus
ENSXETG00000023546	rpusd3	99	51.064	ENSECAG00000019988	RPUSD3	78	51.064	Equus_caballus
ENSXETG00000023546	rpusd3	76	46.262	ENSEEUG00000007353	RPUSD3	60	46.262	Erinaceus_europaeus
ENSXETG00000023546	rpusd3	99	49.645	ENSFCAG00000014199	RPUSD3	80	49.645	Felis_catus
ENSXETG00000023546	rpusd3	96	46.324	ENSFALG00000012968	RPUSD3	99	46.324	Ficedula_albicollis
ENSXETG00000023546	rpusd3	93	47.925	ENSFDAG00000008350	RPUSD3	83	47.253	Fukomys_damarensis
ENSXETG00000023546	rpusd3	93	57.576	ENSGAGG00000007493	RPUSD3	83	57.955	Gopherus_agassizii
ENSXETG00000023546	rpusd3	99	50.178	ENSGGOG00000013120	RPUSD3	81	50.289	Gorilla_gorilla
ENSXETG00000023546	rpusd3	99	46.429	ENSHGLG00000011722	RPUSD3	71	46.429	Heterocephalus_glaber_female
ENSXETG00000023546	rpusd3	99	46.429	ENSHGLG00100016038	RPUSD3	71	46.429	Heterocephalus_glaber_male
ENSXETG00000023546	rpusd3	99	50.534	ENSSTOG00000002125	RPUSD3	79	50.534	Ictidomys_tridecemlineatus
ENSXETG00000023546	rpusd3	99	47.687	ENSJJAG00000012679	Rpusd3	81	47.687	Jaculus_jaculus
ENSXETG00000023546	rpusd3	99	48.399	ENSLAFG00000017501	RPUSD3	81	48.399	Loxodonta_africana
ENSXETG00000023546	rpusd3	99	49.822	ENSMFAG00000032407	RPUSD3	79	49.822	Macaca_fascicularis
ENSXETG00000023546	rpusd3	99	50.178	ENSMMUG00000010628	RPUSD3	87	50.178	Macaca_mulatta
ENSXETG00000023546	rpusd3	99	49.822	ENSMNEG00000040308	RPUSD3	79	49.822	Macaca_nemestrina
ENSXETG00000023546	rpusd3	99	50.178	ENSMLEG00000033940	RPUSD3	81	49.711	Mandrillus_leucophaeus
ENSXETG00000023546	rpusd3	97	48.014	ENSMAUG00000015473	Rpusd3	80	48.014	Mesocricetus_auratus
ENSXETG00000023546	rpusd3	99	48.399	ENSMICG00000002315	RPUSD3	81	48.399	Microcebus_murinus
ENSXETG00000023546	rpusd3	98	48.201	ENSMOCG00000022613	Rpusd3	80	48.201	Microtus_ochrogaster
ENSXETG00000023546	rpusd3	99	49.286	ENSMODG00000005210	RPUSD3	73	49.286	Monodelphis_domestica
ENSXETG00000023546	rpusd3	98	47.122	MGP_CAROLIEiJ_G0028725	Rpusd3	80	47.442	Mus_caroli
ENSXETG00000023546	rpusd3	98	47.842	ENSMUSG00000051169	Rpusd3	80	48.837	Mus_musculus
ENSXETG00000023546	rpusd3	98	48.201	MGP_PahariEiJ_G0022476	Rpusd3	80	49.767	Mus_pahari
ENSXETG00000023546	rpusd3	98	47.842	MGP_SPRETEiJ_G0029753	Rpusd3	80	48.372	Mus_spretus
ENSXETG00000023546	rpusd3	99	48.399	ENSMPUG00000017132	RPUSD3	79	48.399	Mustela_putorius_furo
ENSXETG00000023546	rpusd3	99	49.822	ENSMLUG00000006135	RPUSD3	80	49.822	Myotis_lucifugus
ENSXETG00000023546	rpusd3	99	46.429	ENSNGAG00000023704	Rpusd3	83	46.429	Nannospalax_galili
ENSXETG00000023546	rpusd3	99	40.426	ENSNLEG00000004214	RPUSD3	81	49.133	Nomascus_leucogenys
ENSXETG00000023546	rpusd3	92	50.000	ENSMEUG00000013098	-	100	50.000	Notamacropus_eugenii
ENSXETG00000023546	rpusd3	99	39.502	ENSOPRG00000002300	RPUSD3	79	39.502	Ochotona_princeps
ENSXETG00000023546	rpusd3	93	46.565	ENSODEG00000018137	RPUSD3	90	46.565	Octodon_degus
ENSXETG00000023546	rpusd3	99	41.429	ENSOANG00000012081	-	97	41.429	Ornithorhynchus_anatinus
ENSXETG00000023546	rpusd3	99	46.690	ENSOCUG00000027885	RPUSD3	83	46.690	Oryctolagus_cuniculus
ENSXETG00000023546	rpusd3	99	50.355	ENSOGAG00000012592	RPUSD3	89	50.355	Otolemur_garnettii
ENSXETG00000023546	rpusd3	99	50.000	ENSOARG00000005928	RPUSD3	80	50.000	Ovis_aries
ENSXETG00000023546	rpusd3	99	49.822	ENSPPAG00000038083	RPUSD3	81	50.289	Pan_paniscus
ENSXETG00000023546	rpusd3	99	48.936	ENSPPRG00000024433	RPUSD3	80	48.936	Panthera_pardus
ENSXETG00000023546	rpusd3	99	49.645	ENSPTIG00000006828	RPUSD3	81	49.645	Panthera_tigris_altaica
ENSXETG00000023546	rpusd3	99	49.822	ENSPTRG00000051760	RPUSD3	81	50.289	Pan_troglodytes
ENSXETG00000023546	rpusd3	99	50.000	ENSPANG00000023885	RPUSD3	81	49.711	Papio_anubis
ENSXETG00000023546	rpusd3	98	48.029	ENSPEMG00000017245	Rpusd3	80	48.029	Peromyscus_maniculatus_bairdii
ENSXETG00000023546	rpusd3	99	47.857	ENSPCIG00000021901	RPUSD3	81	47.857	Phascolarctos_cinereus
ENSXETG00000023546	rpusd3	99	49.822	ENSPPYG00000013676	RPUSD3	79	49.822	Pongo_abelii
ENSXETG00000023546	rpusd3	54	46.405	ENSPCAG00000013731	-	53	46.405	Procavia_capensis
ENSXETG00000023546	rpusd3	99	50.355	ENSPCOG00000018314	RPUSD3	80	50.355	Propithecus_coquereli
ENSXETG00000023546	rpusd3	99	49.466	ENSPVAG00000011107	RPUSD3	79	49.466	Pteropus_vampyrus
ENSXETG00000023546	rpusd3	87	48.387	ENSRNOG00000009084	Rpusd3	77	48.387	Rattus_norvegicus
ENSXETG00000023546	rpusd3	99	49.645	ENSRBIG00000041230	RPUSD3	81	49.711	Rhinopithecus_bieti
ENSXETG00000023546	rpusd3	99	49.645	ENSRROG00000043328	RPUSD3	81	49.711	Rhinopithecus_roxellana
ENSXETG00000023546	rpusd3	99	50.890	ENSSBOG00000036106	RPUSD3	80	50.890	Saimiri_boliviensis_boliviensis
ENSXETG00000023546	rpusd3	99	46.786	ENSSHAG00000015536	RPUSD3	90	46.786	Sarcophilus_harrisii
ENSXETG00000023546	rpusd3	99	48.754	ENSSSCG00000011555	RPUSD3	79	48.754	Sus_scrofa
ENSXETG00000023546	rpusd3	83	46.154	ENSTGUG00000008744	RPUSD3	100	46.154	Taeniopygia_guttata
ENSXETG00000023546	rpusd3	77	49.321	ENSTBEG00000000176	RPUSD3	76	49.321	Tupaia_belangeri
ENSXETG00000023546	rpusd3	99	47.163	ENSTTRG00000007544	RPUSD3	80	47.163	Tursiops_truncatus
ENSXETG00000023546	rpusd3	99	48.936	ENSUAMG00000011354	RPUSD3	87	48.936	Ursus_americanus
ENSXETG00000023546	rpusd3	99	48.936	ENSUMAG00000018830	RPUSD3	80	48.936	Ursus_maritimus
ENSXETG00000023546	rpusd3	99	48.754	ENSVVUG00000023735	RPUSD3	81	48.754	Vulpes_vulpes