EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSXETG00000023567 (Gene tree)
Gene ID: -
Gene Symbol: hnrnph3
Alias: -
Full Name: Xenopus tropicalis heterogeneous nuclear ribonucleoprotein H3 (hnrnph3)%2C mRNA.
Gene Type: protein_coding
Species: Xenopus_tropicalis
Status: putative
Strand: Plus strand
Length: 7601 bases
Position: chrGL172880.1:760727-768327
Accession: NM_001127435
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSXETP00000059353	RRM_1	PF00076.22	1.4e-32	1	3
ENSXETP00000059353	RRM_1	PF00076.22	1.4e-32	2	3
ENSXETP00000059353	RRM_1	PF00076.22	1.4e-32	3	3
ENSXETP00000050855	RRM_1	PF00076.22	3.8e-32	1	3
ENSXETP00000050855	RRM_1	PF00076.22	3.8e-32	2	3
ENSXETP00000050855	RRM_1	PF00076.22	3.8e-32	3	3

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSXETT00000050855	-	1396	-	ENSXETP00000050855	441 (aa)	-	F6RXS2
ENSXETT00000064787	-	1963	XM_012966115	ENSXETP00000059353	416 (aa)	XP_012821569	B2GUJ1

Gene Model

Click here to download ENSXETG00000023567's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSXETG00000023567's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSXETG00000023567	hnrnph3	84	34.737	ENSXETG00000014694	rbm12b	82	38.235
ENSXETG00000023567	hnrnph3	97	66.015	ENSXETG00000018321	hnrnph1	90	65.693
ENSXETG00000023567	hnrnph3	86	42.179	ENSXETG00000013850	grsf1	99	41.622

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSXETG00000023567	hnrnph3	95	77.570	ENSG00000096746	HNRNPH3	96	78.221	Homo_sapiens
ENSXETG00000023567	hnrnph3	96	71.196	ENSAPOG00000021843	hnrnph3	98	68.687	Acanthochromis_polyacanthus
ENSXETG00000023567	hnrnph3	95	77.259	ENSAMEG00000018064	HNRNPH3	96	77.914	Ailuropoda_melanoleuca
ENSXETG00000023567	hnrnph3	96	70.000	ENSACIG00000007244	hnrnph3	98	69.730	Amphilophus_citrinellus
ENSXETG00000023567	hnrnph3	96	70.652	ENSAOCG00000011957	hnrnph3	98	68.687	Amphiprion_ocellaris
ENSXETG00000023567	hnrnph3	96	70.652	ENSAPEG00000006201	hnrnph3	98	68.687	Amphiprion_percula
ENSXETG00000023567	hnrnph3	88	70.811	ENSATEG00000021208	hnrnph3	99	68.672	Anabas_testudineus
ENSXETG00000023567	hnrnph3	97	77.160	ENSAPLG00000001116	HNRNPH3	93	77.778	Anas_platyrhynchos
ENSXETG00000023567	hnrnph3	96	79.747	ENSACAG00000010365	HNRNPH3	93	80.997	Anolis_carolinensis
ENSXETG00000023567	hnrnph3	72	73.874	ENSANAG00000024326	HNRNPH3	92	57.944	Aotus_nancymaae
ENSXETG00000023567	hnrnph3	97	67.200	ENSACLG00000008447	hnrnph3	96	65.445	Astatotilapia_calliptera
ENSXETG00000023567	hnrnph3	87	70.270	ENSAMXG00000021323	hnrnph3	93	71.429	Astyanax_mexicanus
ENSXETG00000023567	hnrnph3	96	77.914	ENSBTAG00000014316	HNRNPH3	96	78.221	Bos_taurus
ENSXETG00000023567	hnrnph3	95	77.570	ENSCJAG00000019154	HNRNPH3	96	78.221	Callithrix_jacchus
ENSXETG00000023567	hnrnph3	95	77.570	ENSCAFG00000013619	HNRNPH3	96	78.221	Canis_familiaris
ENSXETG00000023567	hnrnph3	95	77.570	ENSCAFG00020026261	HNRNPH3	96	78.221	Canis_lupus_dingo
ENSXETG00000023567	hnrnph3	95	77.570	ENSCHIG00000026467	-	96	78.221	Capra_hircus
ENSXETG00000023567	hnrnph3	95	77.570	ENSTSYG00000005319	-	96	78.221	Carlito_syrichta
ENSXETG00000023567	hnrnph3	95	64.174	ENSCAPG00000013030	HNRNPH3	92	78.241	Cavia_aperea
ENSXETG00000023567	hnrnph3	95	77.570	ENSCPOG00000006397	HNRNPH3	96	78.221	Cavia_porcellus
ENSXETG00000023567	hnrnph3	95	77.570	ENSCCAG00000028531	HNRNPH3	96	78.221	Cebus_capucinus
ENSXETG00000023567	hnrnph3	95	77.570	ENSCATG00000039188	HNRNPH3	96	78.221	Cercocebus_atys
ENSXETG00000023567	hnrnph3	95	77.259	ENSCLAG00000010680	HNRNPH3	96	77.914	Chinchilla_lanigera
ENSXETG00000023567	hnrnph3	95	77.570	ENSCSAG00000007572	HNRNPH3	96	78.221	Chlorocebus_sabaeus
ENSXETG00000023567	hnrnph3	90	74.643	ENSCHOG00000012954	HNRNPH3	92	76.842	Choloepus_hoffmanni
ENSXETG00000023567	hnrnph3	96	80.442	ENSCPBG00000019569	HNRNPH3	93	79.503	Chrysemys_picta_bellii
ENSXETG00000023567	hnrnph3	95	77.570	ENSCANG00000031750	HNRNPH3	96	78.221	Colobus_angolensis_palliatus
ENSXETG00000023567	hnrnph3	95	79.114	ENSCGRG00001024086	Hnrnph3	93	79.439	Cricetulus_griseus_chok1gshd
ENSXETG00000023567	hnrnph3	95	79.114	ENSCGRG00000017341	Hnrnph3	93	79.439	Cricetulus_griseus_crigri
ENSXETG00000023567	hnrnph3	94	67.164	ENSCSEG00000014207	hnrnph3	99	67.662	Cynoglossus_semilaevis
ENSXETG00000023567	hnrnph3	87	66.486	ENSCVAG00000010461	HNRNPH3	99	62.563	Cyprinodon_variegatus
ENSXETG00000023567	hnrnph3	87	68.767	ENSDARG00000039466	hnrnph3	99	69.106	Danio_rerio
ENSXETG00000023567	hnrnph3	95	77.570	ENSDNOG00000004881	HNRNPH3	96	78.221	Dasypus_novemcinctus
ENSXETG00000023567	hnrnph3	95	76.947	ENSDORG00000011470	Hnrnph3	96	77.607	Dipodomys_ordii
ENSXETG00000023567	hnrnph3	95	77.570	ENSEASG00005015382	HNRNPH3	96	78.221	Equus_asinus_asinus
ENSXETG00000023567	hnrnph3	95	77.570	ENSECAG00000007190	HNRNPH3	96	78.221	Equus_caballus
ENSXETG00000023567	hnrnph3	94	84.884	ENSEEUG00000005025	HNRNPH3	74	84.884	Erinaceus_europaeus
ENSXETG00000023567	hnrnph3	79	80.723	ENSELUG00000018424	hnrnph3	92	73.143	Esox_lucius
ENSXETG00000023567	hnrnph3	95	77.570	ENSFCAG00000032291	HNRNPH3	96	78.221	Felis_catus
ENSXETG00000023567	hnrnph3	97	78.019	ENSFALG00000012964	HNRNPH3	93	77.399	Ficedula_albicollis
ENSXETG00000023567	hnrnph3	95	77.570	ENSFDAG00000008155	-	96	78.221	Fukomys_damarensis
ENSXETG00000023567	hnrnph3	93	53.943	ENSFDAG00000014531	-	93	53.963	Fukomys_damarensis
ENSXETG00000023567	hnrnph3	87	66.216	ENSFHEG00000010727	HNRNPH3	99	63.409	Fundulus_heteroclitus
ENSXETG00000023567	hnrnph3	96	69.315	ENSGMOG00000012413	hnrnph3	98	69.863	Gadus_morhua
ENSXETG00000023567	hnrnph3	97	78.019	ENSGALG00000003947	HNRNPH3	95	77.399	Gallus_gallus
ENSXETG00000023567	hnrnph3	87	63.784	ENSGAFG00000005286	HNRNPH3	97	62.341	Gambusia_affinis
ENSXETG00000023567	hnrnph3	96	70.461	ENSGACG00000016118	hnrnph3	89	69.972	Gasterosteus_aculeatus
ENSXETG00000023567	hnrnph3	95	70.625	ENSGAGG00000003144	HNRNPH3	92	75.389	Gopherus_agassizii
ENSXETG00000023567	hnrnph3	95	71.875	ENSGGOG00000025378	HNRNPH3	95	73.538	Gorilla_gorilla
ENSXETG00000023567	hnrnph3	97	70.166	ENSHBUG00000018007	hnrnph3	96	66.667	Haplochromis_burtoni
ENSXETG00000023567	hnrnph3	91	63.158	ENSHGLG00000008716	-	88	64.883	Heterocephalus_glaber_female
ENSXETG00000023567	hnrnph3	95	77.570	ENSHGLG00000011321	-	96	78.221	Heterocephalus_glaber_female
ENSXETG00000023567	hnrnph3	95	77.570	ENSHGLG00100017813	-	96	78.221	Heterocephalus_glaber_male
ENSXETG00000023567	hnrnph3	91	63.158	ENSHGLG00100000514	-	88	64.883	Heterocephalus_glaber_male
ENSXETG00000023567	hnrnph3	86	69.231	ENSHCOG00000014335	hnrnph3	92	66.484	Hippocampus_comes
ENSXETG00000023567	hnrnph3	87	70.541	ENSIPUG00000016015	hnrnph3	98	69.598	Ictalurus_punctatus
ENSXETG00000023567	hnrnph3	95	77.570	ENSSTOG00000011676	HNRNPH3	96	78.221	Ictidomys_tridecemlineatus
ENSXETG00000023567	hnrnph3	95	72.013	ENSJJAG00000022736	-	95	73.375	Jaculus_jaculus
ENSXETG00000023567	hnrnph3	87	67.838	ENSKMAG00000020517	hnrnph3	93	66.486	Kryptolebias_marmoratus
ENSXETG00000023567	hnrnph3	94	72.162	ENSLBEG00000008709	hnrnph3	94	69.054	Labrus_bergylta
ENSXETG00000023567	hnrnph3	64	68.217	ENSLBEG00000001661	hnrnph3	79	68.217	Labrus_bergylta
ENSXETG00000023567	hnrnph3	96	64.734	ENSLACG00000013291	HNRNPH3	79	65.632	Latimeria_chalumnae
ENSXETG00000023567	hnrnph3	96	68.039	ENSLOCG00000009247	hnrnph3	96	68.523	Lepisosteus_oculatus
ENSXETG00000023567	hnrnph3	95	77.950	ENSLAFG00000012955	HNRNPH3	96	77.064	Loxodonta_africana
ENSXETG00000023567	hnrnph3	95	77.570	ENSMFAG00000039598	HNRNPH3	96	78.221	Macaca_fascicularis
ENSXETG00000023567	hnrnph3	95	77.570	ENSMMUG00000009792	HNRNPH3	96	78.221	Macaca_mulatta
ENSXETG00000023567	hnrnph3	95	77.570	ENSMNEG00000038866	HNRNPH3	96	78.221	Macaca_nemestrina
ENSXETG00000023567	hnrnph3	95	77.570	ENSMLEG00000038699	HNRNPH3	96	78.221	Mandrillus_leucophaeus
ENSXETG00000023567	hnrnph3	96	70.541	ENSMAMG00000020155	hnrnph3	92	71.351	Mastacembelus_armatus
ENSXETG00000023567	hnrnph3	97	70.133	ENSMZEG00005011374	hnrnph3	97	68.217	Maylandia_zebra
ENSXETG00000023567	hnrnph3	97	74.224	ENSMGAG00000003795	HNRNPH3	93	73.375	Meleagris_gallopavo
ENSXETG00000023567	hnrnph3	95	77.570	ENSMAUG00000022233	Hnrnph3	96	78.221	Mesocricetus_auratus
ENSXETG00000023567	hnrnph3	95	77.570	ENSMICG00000007581	HNRNPH3	96	78.221	Microcebus_murinus
ENSXETG00000023567	hnrnph3	95	79.114	ENSMOCG00000008138	Hnrnph3	93	79.439	Microtus_ochrogaster
ENSXETG00000023567	hnrnph3	96	72.162	ENSMMOG00000015374	hnrnph3	81	71.351	Mola_mola
ENSXETG00000023567	hnrnph3	95	74.688	ENSMODG00000017283	HNRNPH3	95	74.462	Monodelphis_domestica
ENSXETG00000023567	hnrnph3	87	67.838	ENSMALG00000005779	hnrnph3	95	65.829	Monopterus_albus
ENSXETG00000023567	hnrnph3	95	77.570	MGP_CAROLIEiJ_G0015396	Hnrnph3	96	78.221	Mus_caroli
ENSXETG00000023567	hnrnph3	95	77.259	ENSMUSG00000020069	Hnrnph3	96	77.914	Mus_musculus
ENSXETG00000023567	hnrnph3	95	76.636	MGP_PahariEiJ_G0030812	Hnrnph3	96	77.607	Mus_pahari
ENSXETG00000023567	hnrnph3	95	77.259	MGP_SPRETEiJ_G0016207	Hnrnph3	96	77.914	Mus_spretus
ENSXETG00000023567	hnrnph3	96	77.914	ENSMPUG00000011997	HNRNPH3	97	74.212	Mustela_putorius_furo
ENSXETG00000023567	hnrnph3	95	71.875	ENSMLUG00000000143	HNRNPH3	95	73.538	Myotis_lucifugus
ENSXETG00000023567	hnrnph3	95	77.259	ENSNGAG00000011731	Hnrnph3	96	77.914	Nannospalax_galili
ENSXETG00000023567	hnrnph3	97	70.400	ENSNBRG00000004383	hnrnph3	99	66.749	Neolamprologus_brichardi
ENSXETG00000023567	hnrnph3	95	77.570	ENSNLEG00000011843	HNRNPH3	96	78.221	Nomascus_leucogenys
ENSXETG00000023567	hnrnph3	95	76.636	ENSMEUG00000013139	HNRNPH3	96	77.914	Notamacropus_eugenii
ENSXETG00000023567	hnrnph3	95	77.259	ENSOPRG00000014850	HNRNPH3	95	77.914	Ochotona_princeps
ENSXETG00000023567	hnrnph3	95	77.259	ENSODEG00000004517	HNRNPH3	96	77.914	Octodon_degus
ENSXETG00000023567	hnrnph3	97	70.133	ENSONIG00000017042	hnrnph3	99	66.501	Oreochromis_niloticus
ENSXETG00000023567	hnrnph3	95	75.312	ENSOANG00000002260	HNRNPH3	95	75.077	Ornithorhynchus_anatinus
ENSXETG00000023567	hnrnph3	95	77.570	ENSOCUG00000004443	HNRNPH3	96	78.221	Oryctolagus_cuniculus
ENSXETG00000023567	hnrnph3	87	69.892	ENSORLG00000010499	hnrnph3	93	69.542	Oryzias_latipes
ENSXETG00000023567	hnrnph3	97	70.699	ENSORLG00020003778	hnrnph3	93	70.081	Oryzias_latipes_hni
ENSXETG00000023567	hnrnph3	87	70.430	ENSORLG00015001985	hnrnph3	93	70.081	Oryzias_latipes_hsok
ENSXETG00000023567	hnrnph3	87	70.430	ENSOMEG00000005017	hnrnph3	93	69.811	Oryzias_melastigma
ENSXETG00000023567	hnrnph3	95	77.570	ENSOGAG00000012493	HNRNPH3	96	78.221	Otolemur_garnettii
ENSXETG00000023567	hnrnph3	95	77.259	ENSOARG00000004981	HNRNPH3	96	77.914	Ovis_aries
ENSXETG00000023567	hnrnph3	95	77.570	ENSPPAG00000033764	HNRNPH3	96	78.221	Pan_paniscus
ENSXETG00000023567	hnrnph3	95	77.570	ENSPPRG00000004134	HNRNPH3	96	78.221	Panthera_pardus
ENSXETG00000023567	hnrnph3	95	77.570	ENSPTIG00000011896	HNRNPH3	96	78.221	Panthera_tigris_altaica
ENSXETG00000023567	hnrnph3	95	77.570	ENSPTRG00000002553	HNRNPH3	96	78.221	Pan_troglodytes
ENSXETG00000023567	hnrnph3	95	77.570	ENSPANG00000022105	HNRNPH3	96	78.221	Papio_anubis
ENSXETG00000023567	hnrnph3	88	83.333	ENSPKIG00000008373	HNRNPH3	84	80.263	Paramormyrops_kingsleyae
ENSXETG00000023567	hnrnph3	96	70.938	ENSPSIG00000007332	HNRNPH3	93	75.701	Pelodiscus_sinensis
ENSXETG00000023567	hnrnph3	98	69.101	ENSPMGG00000001373	hnrnph3	98	68.820	Periophthalmus_magnuspinnatus
ENSXETG00000023567	hnrnph3	95	77.570	ENSPEMG00000017748	Hnrnph3	96	78.221	Peromyscus_maniculatus_bairdii
ENSXETG00000023567	hnrnph3	95	73.438	ENSPCIG00000014462	HNRNPH3	95	73.846	Phascolarctos_cinereus
ENSXETG00000023567	hnrnph3	87	64.324	ENSPFOG00000015322	HNRNPH3	97	62.595	Poecilia_formosa
ENSXETG00000023567	hnrnph3	87	64.324	ENSPLAG00000008895	-	97	62.595	Poecilia_latipinna
ENSXETG00000023567	hnrnph3	88	63.636	ENSPMEG00000008778	-	92	63.636	Poecilia_mexicana
ENSXETG00000023567	hnrnph3	86	64.578	ENSPREG00000009812	HNRNPH3	97	62.595	Poecilia_reticulata
ENSXETG00000023567	hnrnph3	95	77.570	ENSPPYG00000002397	HNRNPH3	96	78.221	Pongo_abelii
ENSXETG00000023567	hnrnph3	94	73.832	ENSPCAG00000000111	HNRNPH3	96	74.540	Procavia_capensis
ENSXETG00000023567	hnrnph3	95	77.570	ENSPCOG00000028162	HNRNPH3	96	78.221	Propithecus_coquereli
ENSXETG00000023567	hnrnph3	85	81.685	ENSPVAG00000008037	HNRNPH3	86	78.218	Pteropus_vampyrus
ENSXETG00000023567	hnrnph3	97	70.133	ENSPNYG00000016363	hnrnph3	97	68.217	Pundamilia_nyererei
ENSXETG00000023567	hnrnph3	87	69.565	ENSPNAG00000000466	hnrnph3	93	70.924	Pygocentrus_nattereri
ENSXETG00000023567	hnrnph3	95	77.259	ENSRNOG00000048193	Hnrnph3	96	77.914	Rattus_norvegicus
ENSXETG00000023567	hnrnph3	95	77.570	ENSRBIG00000028004	HNRNPH3	96	78.221	Rhinopithecus_bieti
ENSXETG00000023567	hnrnph3	95	77.570	ENSRROG00000031653	HNRNPH3	96	78.221	Rhinopithecus_roxellana
ENSXETG00000023567	hnrnph3	95	77.570	ENSSBOG00000022722	HNRNPH3	100	79.661	Saimiri_boliviensis_boliviensis
ENSXETG00000023567	hnrnph3	95	79.114	ENSSHAG00000010909	HNRNPH3	96	79.439	Sarcophilus_harrisii
ENSXETG00000023567	hnrnph3	86	71.547	ENSSFOG00015015000	hnrnph3	98	69.565	Scleropages_formosus
ENSXETG00000023567	hnrnph3	87	70.541	ENSSMAG00000004504	hnrnph3	99	67.164	Scophthalmus_maximus
ENSXETG00000023567	hnrnph3	96	71.622	ENSSDUG00000000160	hnrnph3	93	68.657	Seriola_dumerili
ENSXETG00000023567	hnrnph3	96	71.351	ENSSLDG00000025679	hnrnph3	99	68.922	Seriola_lalandi_dorsalis
ENSXETG00000023567	hnrnph3	85	81.319	ENSSARG00000013863	HNRNPH3	78	81.319	Sorex_araneus
ENSXETG00000023567	hnrnph3	59	85.106	ENSSPUG00000009577	-	87	58.152	Sphenodon_punctatus
ENSXETG00000023567	hnrnph3	95	79.811	ENSSPUG00000001687	-	93	78.882	Sphenodon_punctatus
ENSXETG00000023567	hnrnph3	97	70.777	ENSSPAG00000013124	hnrnph3	93	69.466	Stegastes_partitus
ENSXETG00000023567	hnrnph3	95	77.570	ENSSSCG00000010238	HNRNPH3	96	78.221	Sus_scrofa
ENSXETG00000023567	hnrnph3	97	78.019	ENSTGUG00000003609	HNRNPH3	93	77.399	Taeniopygia_guttata
ENSXETG00000023567	hnrnph3	97	67.700	ENSTRUG00000023443	hnrnph3	83	67.700	Takifugu_rubripes
ENSXETG00000023567	hnrnph3	97	70.879	ENSTNIG00000013788	hnrnph3	99	70.330	Tetraodon_nigroviridis
ENSXETG00000023567	hnrnph3	95	72.897	ENSTBEG00000006114	HNRNPH3	93	73.926	Tupaia_belangeri
ENSXETG00000023567	hnrnph3	95	77.570	ENSTTRG00000013322	HNRNPH3	96	78.221	Tursiops_truncatus
ENSXETG00000023567	hnrnph3	96	77.914	ENSUAMG00000011846	HNRNPH3	98	78.221	Ursus_americanus
ENSXETG00000023567	hnrnph3	95	71.875	ENSUMAG00000007264	HNRNPH3	95	73.538	Ursus_maritimus
ENSXETG00000023567	hnrnph3	95	77.570	ENSVPAG00000011814	HNRNPH3	96	78.221	Vicugna_pacos
ENSXETG00000023567	hnrnph3	95	77.570	ENSVVUG00000020145	HNRNPH3	96	78.221	Vulpes_vulpes
ENSXETG00000023567	hnrnph3	83	63.068	ENSXCOG00000012095	hnrnph3	96	61.247	Xiphophorus_couchianus
ENSXETG00000023567	hnrnph3	87	64.054	ENSXMAG00000014775	HNRNPH3	97	62.595	Xiphophorus_maculatus