EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSXETG00000023713 (Gene tree)
Gene ID: -
Gene Symbol: arl5c
Alias: -
Full Name: ADP ribosylation factor like GTPase 5C
Gene Type: protein_coding
Species: Xenopus_tropicalis
Status: putative
Strand: Plus strand
Length: 9556 bases
Position: chrGL173322.1:348812-358367
Accession: XB-GENE-5898153
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSXETP00000051160	MMR_HSR1	PF01926.23	5.1e-07	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSXETT00000051160	-	585	-	ENSXETP00000051160	194 (aa)	-	F7E6G3

Gene Model

Click here to download ENSXETG00000023713's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSXETG00000023713's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSXETG00000023713	arl5c	84	40.606	ENSXETG00000008725	arl14	80	40.606
ENSXETG00000023713	arl5c	89	41.758	ENSXETG00000011342	arl4a	91	41.758
ENSXETG00000023713	arl5c	91	50.847	ENSXETG00000014250	arf1	98	50.847
ENSXETG00000023713	arl5c	91	50.847	ENSXETG00000011174	arf3	98	50.847
ENSXETG00000023713	arl5c	90	72.571	ENSXETG00000022765	arl5b	97	72.571
ENSXETG00000023713	arl5c	65	30.827	ENSXETG00000020404	rab25	59	30.827
ENSXETG00000023713	arl5c	98	42.408	ENSXETG00000015225	arl3	97	42.408
ENSXETG00000023713	arl5c	85	41.463	ENSXETG00000001661	arl2	89	41.463
ENSXETG00000023713	arl5c	91	46.893	ENSXETG00000008654	arf4	97	46.893
ENSXETG00000023713	arl5c	82	49.057	ENSXETG00000002540	arl1	96	49.133
ENSXETG00000023713	arl5c	82	42.857	ENSXETG00000015673	arl11	91	42.857
ENSXETG00000023713	arl5c	80	32.692	ENSXETG00000022337	arl10	60	32.692
ENSXETG00000023713	arl5c	79	32.515	ENSXETG00000032383	ARL13B	59	32.515
ENSXETG00000023713	arl5c	89	40.462	ENSXETG00000022343	arl3l2	93	40.462
ENSXETG00000023713	arl5c	89	43.333	ENSXETG00000010915	arl4c	91	43.333
ENSXETG00000023713	arl5c	91	70.225	ENSXETG00000021692	arl5a	98	70.225
ENSXETG00000023713	arl5c	91	50.282	ENSXETG00000013916	arf5	98	50.282

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSXETG00000023713	arl5c	92	73.184	ENSAMEG00000004195	ARL5C	99	73.184	Ailuropoda_melanoleuca
ENSXETG00000023713	arl5c	92	77.095	ENSACAG00000003879	-	100	77.095	Anolis_carolinensis
ENSXETG00000023713	arl5c	92	77.654	ENSCAFG00000016525	ARL5C	100	77.654	Canis_familiaris
ENSXETG00000023713	arl5c	92	76.536	ENSCHIG00000008208	ARL5C	100	76.536	Capra_hircus
ENSXETG00000023713	arl5c	55	81.132	ENSCHOG00000013232	-	100	81.132	Choloepus_hoffmanni
ENSXETG00000023713	arl5c	91	69.492	ENSCGRG00001000695	Arl5c	99	69.492	Cricetulus_griseus_chok1gshd
ENSXETG00000023713	arl5c	91	70.056	ENSCGRG00000007376	Arl5c	99	70.056	Cricetulus_griseus_crigri
ENSXETG00000023713	arl5c	92	77.654	ENSDNOG00000019741	ARL5C	100	77.654	Dasypus_novemcinctus
ENSXETG00000023713	arl5c	92	73.743	ENSDORG00000016304	Arl5c	100	73.743	Dipodomys_ordii
ENSXETG00000023713	arl5c	85	81.707	ENSEASG00005001922	ARL5C	76	81.707	Equus_asinus_asinus
ENSXETG00000023713	arl5c	92	78.771	ENSECAG00000009024	ARL5C	100	78.771	Equus_caballus
ENSXETG00000023713	arl5c	92	78.212	ENSFCAG00000009962	ARL5C	100	78.212	Felis_catus
ENSXETG00000023713	arl5c	92	79.888	ENSSTOG00000011104	ARL5C	100	79.888	Ictidomys_tridecemlineatus
ENSXETG00000023713	arl5c	92	79.330	ENSLACG00000015332	ARL5C	100	79.330	Latimeria_chalumnae
ENSXETG00000023713	arl5c	92	79.330	ENSLAFG00000018248	ARL5C	99	79.330	Loxodonta_africana
ENSXETG00000023713	arl5c	91	66.102	ENSMAUG00000012845	Arl5c	87	66.102	Mesocricetus_auratus
ENSXETG00000023713	arl5c	92	76.536	ENSMICG00000002661	ARL5C	100	76.536	Microcebus_murinus
ENSXETG00000023713	arl5c	92	69.832	ENSMOCG00000000234	Arl5c	100	69.832	Microtus_ochrogaster
ENSXETG00000023713	arl5c	92	75.978	MGP_CAROLIEiJ_G0017071	Arl5c	100	75.978	Mus_caroli
ENSXETG00000023713	arl5c	92	75.978	ENSMUSG00000038352	Arl5c	100	75.978	Mus_musculus
ENSXETG00000023713	arl5c	92	75.419	MGP_PahariEiJ_G0018200	Arl5c	100	75.419	Mus_pahari
ENSXETG00000023713	arl5c	92	75.978	MGP_SPRETEiJ_G0017917	Arl5c	100	75.978	Mus_spretus
ENSXETG00000023713	arl5c	92	76.536	ENSMLUG00000030149	ARL5C	99	76.536	Myotis_lucifugus
ENSXETG00000023713	arl5c	92	78.771	ENSOGAG00000005894	ARL5C	100	78.771	Otolemur_garnettii
ENSXETG00000023713	arl5c	92	77.095	ENSOARG00000010377	ARL5C	99	77.095	Ovis_aries
ENSXETG00000023713	arl5c	92	77.654	ENSPPRG00000000975	ARL5C	100	77.654	Panthera_pardus
ENSXETG00000023713	arl5c	92	78.212	ENSPTIG00000017487	ARL5C	100	78.212	Panthera_tigris_altaica
ENSXETG00000023713	arl5c	92	75.419	ENSPEMG00000008932	Arl5c	100	75.419	Peromyscus_maniculatus_bairdii
ENSXETG00000023713	arl5c	92	77.095	ENSPCOG00000028489	ARL5C	100	77.095	Propithecus_coquereli
ENSXETG00000023713	arl5c	87	79.167	ENSPVAG00000008495	ARL5C	99	79.167	Pteropus_vampyrus
ENSXETG00000023713	arl5c	92	74.302	ENSRNOG00000036880	Arl5c	100	74.302	Rattus_norvegicus
ENSXETG00000023713	arl5c	89	67.442	ENSSBOG00000021022	ARL5C	98	67.442	Saimiri_boliviensis_boliviensis
ENSXETG00000023713	arl5c	88	81.871	ENSSPUG00000007555	ARL5C	100	83.436	Sphenodon_punctatus
ENSXETG00000023713	arl5c	92	74.860	ENSTBEG00000007274	ARL5C	100	74.860	Tupaia_belangeri
ENSXETG00000023713	arl5c	92	75.978	ENSUAMG00000012299	ARL5C	100	75.978	Ursus_americanus
ENSXETG00000023713	arl5c	92	75.978	ENSUMAG00000017197	ARL5C	100	75.978	Ursus_maritimus