EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSXETG00000023721 (Gene tree)
Gene ID: -
Gene Symbol: rbm34
Alias: -
Full Name: RNA binding motif protein 34
Gene Type: protein_coding
Species: Xenopus_tropicalis
Status: putative
Strand: Plus strand
Length: 12656 bases
Position: chrGL173207.1:41863-54518
Accession: XB-GENE-5895036
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSXETP00000064113	RRM_1	PF00076.22	2.2e-31	1	2
ENSXETP00000064113	RRM_1	PF00076.22	2.2e-31	2	2
ENSXETP00000051175	RRM_1	PF00076.22	7.5e-31	1	2
ENSXETP00000051175	RRM_1	PF00076.22	7.5e-31	2	2

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSXETT00000065344	-	1236	-	ENSXETP00000064113	412 (aa)	-	F6Y181
ENSXETT00000051175	-	1236	-	ENSXETP00000051175	411 (aa)	-	F7E5Z9

Gene Model

Click here to download ENSXETG00000023721's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSXETG00000023721's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSXETG00000023721	rbm34	51	30.108	ENSXETG00000012216	msi1	52	30.108

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSXETG00000023721	rbm34	93	47.407	ENSG00000188739	RBM34	91	47.891	Homo_sapiens
ENSXETG00000023721	rbm34	81	47.633	ENSAPOG00000004027	rbm34	80	49.254	Acanthochromis_polyacanthus
ENSXETG00000023721	rbm34	79	44.954	ENSACIG00000014842	rbm34	85	40.447	Amphilophus_citrinellus
ENSXETG00000023721	rbm34	82	46.705	ENSAOCG00000006146	rbm34	80	46.991	Amphiprion_ocellaris
ENSXETG00000023721	rbm34	82	46.610	ENSAPEG00000022105	rbm34	79	46.328	Amphiprion_percula
ENSXETG00000023721	rbm34	82	47.661	ENSATEG00000016567	rbm34	81	47.661	Anabas_testudineus
ENSXETG00000023721	rbm34	70	53.741	ENSAPLG00000004344	RBM34	93	53.741	Anas_platyrhynchos
ENSXETG00000023721	rbm34	87	50.532	ENSACAG00000001253	RBM34	93	48.363	Anolis_carolinensis
ENSXETG00000023721	rbm34	93	45.843	ENSANAG00000029971	RBM34	91	46.209	Aotus_nancymaae
ENSXETG00000023721	rbm34	93	43.478	ENSACLG00000026337	rbm34	82	44.476	Astatotilapia_calliptera
ENSXETG00000023721	rbm34	93	43.478	ENSACLG00000018471	rbm34	71	44.476	Astatotilapia_calliptera
ENSXETG00000023721	rbm34	82	47.813	ENSAMXG00000021328	rbm34	78	47.813	Astyanax_mexicanus
ENSXETG00000023721	rbm34	93	46.585	ENSCJAG00000018125	RBM34	91	48.030	Callithrix_jacchus
ENSXETG00000023721	rbm34	87	45.383	ENSCAFG00000011507	RBM34	90	45.283	Canis_familiaris
ENSXETG00000023721	rbm34	88	48.698	ENSTSYG00000009942	RBM34	94	47.912	Carlito_syrichta
ENSXETG00000023721	rbm34	70	42.053	ENSCAPG00000015346	RBM34	83	42.475	Cavia_aperea
ENSXETG00000023721	rbm34	87	45.052	ENSCPOG00000015213	RBM34	87	45.312	Cavia_porcellus
ENSXETG00000023721	rbm34	93	46.944	ENSCCAG00000025584	RBM34	91	48.883	Cebus_capucinus
ENSXETG00000023721	rbm34	93	45.906	ENSCATG00000031771	RBM34	92	46.020	Cercocebus_atys
ENSXETG00000023721	rbm34	87	46.702	ENSCLAG00000003464	RBM34	88	47.480	Chinchilla_lanigera
ENSXETG00000023721	rbm34	93	46.517	ENSCSAG00000010079	RBM34	91	46.766	Chlorocebus_sabaeus
ENSXETG00000023721	rbm34	91	50.000	ENSCPBG00000005460	RBM34	84	49.870	Chrysemys_picta_bellii
ENSXETG00000023721	rbm34	93	46.750	ENSCANG00000009561	RBM34	90	47.000	Colobus_angolensis_palliatus
ENSXETG00000023721	rbm34	93	34.541	ENSCGRG00001018721	Rbm34	95	44.203	Cricetulus_griseus_chok1gshd
ENSXETG00000023721	rbm34	92	39.216	ENSCGRG00000014051	Rbm34	94	39.461	Cricetulus_griseus_crigri
ENSXETG00000023721	rbm34	85	43.836	ENSCSEG00000000993	rbm34	77	47.478	Cynoglossus_semilaevis
ENSXETG00000023721	rbm34	87	40.909	ENSCVAG00000018699	rbm34	80	43.939	Cyprinodon_variegatus
ENSXETG00000023721	rbm34	82	46.264	ENSDARG00000101877	rbm34	97	49.329	Danio_rerio
ENSXETG00000023721	rbm34	92	47.761	ENSDNOG00000044740	RBM34	89	48.082	Dasypus_novemcinctus
ENSXETG00000023721	rbm34	66	52.113	ENSDORG00000006420	Rbm34	92	52.113	Dipodomys_ordii
ENSXETG00000023721	rbm34	60	49.012	ENSEBUG00000012070	rbm34	84	47.535	Eptatretus_burgeri
ENSXETG00000023721	rbm34	93	36.386	ENSEEUG00000012760	RBM34	93	36.386	Erinaceus_europaeus
ENSXETG00000023721	rbm34	86	45.308	ENSELUG00000015682	rbm34	80	48.011	Esox_lucius
ENSXETG00000023721	rbm34	81	49.008	ENSFCAG00000001852	RBM34	87	48.285	Felis_catus
ENSXETG00000023721	rbm34	72	44.631	ENSFHEG00000010140	rbm34	98	44.966	Fundulus_heteroclitus
ENSXETG00000023721	rbm34	62	43.359	ENSGMOG00000011683	rbm34	98	44.488	Gadus_morhua
ENSXETG00000023721	rbm34	53	50.222	ENSGALG00000029915	RBM34	77	49.778	Gallus_gallus
ENSXETG00000023721	rbm34	83	45.507	ENSGAFG00000017798	rbm34	82	46.491	Gambusia_affinis
ENSXETG00000023721	rbm34	80	46.646	ENSGACG00000001040	-	76	45.994	Gasterosteus_aculeatus
ENSXETG00000023721	rbm34	95	48.529	ENSGAGG00000020598	RBM34	90	49.741	Gopherus_agassizii
ENSXETG00000023721	rbm34	93	47.030	ENSGGOG00000007924	RBM34	91	48.010	Gorilla_gorilla
ENSXETG00000023721	rbm34	93	43.478	ENSHBUG00000015508	rbm34	82	43.697	Haplochromis_burtoni
ENSXETG00000023721	rbm34	86	47.745	ENSHGLG00000016495	RBM34	86	47.745	Heterocephalus_glaber_female
ENSXETG00000023721	rbm34	86	47.745	ENSHGLG00100014678	RBM34	86	47.745	Heterocephalus_glaber_male
ENSXETG00000023721	rbm34	54	44.889	ENSHCOG00000010393	rbm34	59	42.353	Hippocampus_comes
ENSXETG00000023721	rbm34	77	49.080	ENSIPUG00000021952	rbm34	76	48.830	Ictalurus_punctatus
ENSXETG00000023721	rbm34	92	43.489	ENSSTOG00000002792	RBM34	92	43.489	Ictidomys_tridecemlineatus
ENSXETG00000023721	rbm34	72	48.254	ENSJJAG00000021295	Rbm34	89	50.175	Jaculus_jaculus
ENSXETG00000023721	rbm34	85	41.713	ENSKMAG00000007790	rbm34	84	42.857	Kryptolebias_marmoratus
ENSXETG00000023721	rbm34	94	46.115	ENSLBEG00000022530	-	80	48.830	Labrus_bergylta
ENSXETG00000023721	rbm34	94	38.168	ENSLBEG00000028305	rbm34	78	39.528	Labrus_bergylta
ENSXETG00000023721	rbm34	79	51.437	ENSLACG00000013628	RBM34	85	50.532	Latimeria_chalumnae
ENSXETG00000023721	rbm34	82	50.430	ENSLOCG00000015902	rbm34	78	50.430	Lepisosteus_oculatus
ENSXETG00000023721	rbm34	87	48.564	ENSLAFG00000014289	RBM34	85	48.953	Loxodonta_africana
ENSXETG00000023721	rbm34	93	46.402	ENSMFAG00000038522	RBM34	92	46.517	Macaca_fascicularis
ENSXETG00000023721	rbm34	93	46.402	ENSMMUG00000039424	RBM34	96	46.782	Macaca_mulatta
ENSXETG00000023721	rbm34	93	46.667	ENSMNEG00000040149	RBM34	92	46.517	Macaca_nemestrina
ENSXETG00000023721	rbm34	81	46.512	ENSMAMG00000018828	rbm34	81	46.571	Mastacembelus_armatus
ENSXETG00000023721	rbm34	57	48.347	ENSMZEG00005010091	-	72	50.980	Maylandia_zebra
ENSXETG00000023721	rbm34	93	43.734	ENSMZEG00005021586	rbm34	82	44.759	Maylandia_zebra
ENSXETG00000023721	rbm34	92	50.649	ENSMGAG00000011921	RBM34	94	51.791	Meleagris_gallopavo
ENSXETG00000023721	rbm34	87	45.646	ENSMICG00000038704	-	84	48.098	Microcebus_murinus
ENSXETG00000023721	rbm34	92	45.185	ENSMOCG00000013550	Rbm34	94	45.185	Microtus_ochrogaster
ENSXETG00000023721	rbm34	84	46.023	ENSMMOG00000018675	rbm34	83	46.023	Mola_mola
ENSXETG00000023721	rbm34	87	45.361	ENSMODG00000008436	RBM34	95	44.019	Monodelphis_domestica
ENSXETG00000023721	rbm34	81	44.970	ENSMALG00000007816	rbm34	83	44.478	Monopterus_albus
ENSXETG00000023721	rbm34	88	45.478	MGP_CAROLIEiJ_G0031732	Rbm34	94	44.039	Mus_caroli
ENSXETG00000023721	rbm34	81	45.404	ENSMUSG00000033931	Rbm34	81	45.753	Mus_musculus
ENSXETG00000023721	rbm34	92	44.660	MGP_PahariEiJ_G0023329	Rbm34	94	44.903	Mus_pahari
ENSXETG00000023721	rbm34	83	44.293	MGP_SPRETEiJ_G0032849	Rbm34	88	44.643	Mus_spretus
ENSXETG00000023721	rbm34	80	48.266	ENSMPUG00000002849	RBM34	79	48.266	Mustela_putorius_furo
ENSXETG00000023721	rbm34	89	44.697	ENSMLUG00000016224	RBM34	84	46.011	Myotis_lucifugus
ENSXETG00000023721	rbm34	89	43.570	ENSNGAG00000010712	Rbm34	86	44.533	Nannospalax_galili
ENSXETG00000023721	rbm34	93	42.597	ENSNBRG00000010975	rbm34	83	44.101	Neolamprologus_brichardi
ENSXETG00000023721	rbm34	93	47.512	ENSNLEG00000002610	RBM34	91	47.512	Nomascus_leucogenys
ENSXETG00000023721	rbm34	59	48.221	ENSMEUG00000005465	-	93	45.578	Notamacropus_eugenii
ENSXETG00000023721	rbm34	78	36.471	ENSOPRG00000013930	RBM34	86	36.719	Ochotona_princeps
ENSXETG00000023721	rbm34	86	47.074	ENSODEG00000006130	RBM34	94	48.138	Octodon_degus
ENSXETG00000023721	rbm34	93	44.416	ENSONIG00000018121	rbm34	80	45.821	Oreochromis_niloticus
ENSXETG00000023721	rbm34	94	41.546	ENSOANG00000001206	RBM34	94	42.439	Ornithorhynchus_anatinus
ENSXETG00000023721	rbm34	87	48.021	ENSOCUG00000009173	RBM34	85	48.285	Oryctolagus_cuniculus
ENSXETG00000023721	rbm34	92	40.887	ENSORLG00000001221	rbm34	79	46.154	Oryzias_latipes
ENSXETG00000023721	rbm34	92	40.640	ENSORLG00020016678	rbm34	79	45.858	Oryzias_latipes_hni
ENSXETG00000023721	rbm34	92	40.594	ENSORLG00015016039	rbm34	79	45.858	Oryzias_latipes_hsok
ENSXETG00000023721	rbm34	88	43.947	ENSOMEG00000007902	rbm34	91	43.299	Oryzias_melastigma
ENSXETG00000023721	rbm34	93	43.932	ENSOGAG00000012470	RBM34	91	44.552	Otolemur_garnettii
ENSXETG00000023721	rbm34	93	45.813	ENSPPAG00000030692	RBM34	91	46.287	Pan_paniscus
ENSXETG00000023721	rbm34	81	49.284	ENSPPRG00000013597	RBM34	80	49.856	Panthera_pardus
ENSXETG00000023721	rbm34	81	49.570	ENSPTIG00000011612	RBM34	87	48.800	Panthera_tigris_altaica
ENSXETG00000023721	rbm34	93	47.772	ENSPTRG00000032432	RBM34	91	48.259	Pan_troglodytes
ENSXETG00000023721	rbm34	93	47.772	ENSPTRG00000048646	-	91	48.259	Pan_troglodytes
ENSXETG00000023721	rbm34	93	46.650	ENSPANG00000010411	RBM34	91	46.766	Papio_anubis
ENSXETG00000023721	rbm34	83	49.425	ENSPKIG00000009284	rbm34	80	49.425	Paramormyrops_kingsleyae
ENSXETG00000023721	rbm34	91	50.256	ENSPSIG00000011370	RBM34	88	50.524	Pelodiscus_sinensis
ENSXETG00000023721	rbm34	65	43.750	ENSPMGG00000001183	rbm34	74	45.185	Periophthalmus_magnuspinnatus
ENSXETG00000023721	rbm34	94	44.794	ENSPEMG00000000265	Rbm34	95	45.146	Peromyscus_maniculatus_bairdii
ENSXETG00000023721	rbm34	63	45.487	ENSPMAG00000001602	rbm34	72	45.487	Petromyzon_marinus
ENSXETG00000023721	rbm34	92	44.878	ENSPCIG00000029736	-	77	45.366	Phascolarctos_cinereus
ENSXETG00000023721	rbm34	83	46.110	ENSPFOG00000009829	-	82	46.784	Poecilia_formosa
ENSXETG00000023721	rbm34	83	46.110	ENSPLAG00000018385	-	81	46.784	Poecilia_latipinna
ENSXETG00000023721	rbm34	83	39.359	ENSPMEG00000014440	-	80	40.294	Poecilia_mexicana
ENSXETG00000023721	rbm34	83	45.665	ENSPREG00000023227	rbm34	82	46.647	Poecilia_reticulata
ENSXETG00000023721	rbm34	93	47.264	ENSPPYG00000029513	RBM34	91	47.512	Pongo_abelii
ENSXETG00000023721	rbm34	87	44.588	ENSPCOG00000018448	RBM34	93	45.036	Propithecus_coquereli
ENSXETG00000023721	rbm34	78	49.254	ENSPVAG00000015158	RBM34	88	47.200	Pteropus_vampyrus
ENSXETG00000023721	rbm34	84	44.476	ENSPNYG00000004970	rbm34	82	44.476	Pundamilia_nyererei
ENSXETG00000023721	rbm34	84	48.179	ENSPNAG00000002639	rbm34	81	48.179	Pygocentrus_nattereri
ENSXETG00000023721	rbm34	94	43.584	ENSRNOG00000020004	Rbm34	94	44.118	Rattus_norvegicus
ENSXETG00000023721	rbm34	93	46.750	ENSRBIG00000032900	RBM34	90	47.000	Rhinopithecus_bieti
ENSXETG00000023721	rbm34	93	46.750	ENSRROG00000039131	RBM34	90	47.000	Rhinopithecus_roxellana
ENSXETG00000023721	rbm34	87	46.770	ENSSHAG00000015812	RBM34	87	48.052	Sarcophilus_harrisii
ENSXETG00000023721	rbm34	89	48.101	ENSSFOG00015000148	rbm34	92	48.608	Scleropages_formosus
ENSXETG00000023721	rbm34	81	46.334	ENSSMAG00000020955	rbm34	78	47.214	Scophthalmus_maximus
ENSXETG00000023721	rbm34	83	45.272	ENSSDUG00000019237	rbm34	81	45.098	Seriola_dumerili
ENSXETG00000023721	rbm34	83	43.875	ENSSLDG00000000796	rbm34	82	45.048	Seriola_lalandi_dorsalis
ENSXETG00000023721	rbm34	92	47.727	ENSSPUG00000015430	RBM34	91	49.487	Sphenodon_punctatus
ENSXETG00000023721	rbm34	81	46.108	ENSSPAG00000010174	rbm34	81	45.614	Stegastes_partitus
ENSXETG00000023721	rbm34	78	46.667	ENSTRUG00000011172	rbm34	80	47.385	Takifugu_rubripes
ENSXETG00000023721	rbm34	83	41.854	ENSTNIG00000001302	-	96	41.854	Tetraodon_nigroviridis
ENSXETG00000023721	rbm34	83	39.067	ENSXCOG00000011190	RBM34	83	39.296	Xiphophorus_couchianus
ENSXETG00000023721	rbm34	83	44.928	ENSXMAG00000029852	rbm34	82	45.906	Xiphophorus_maculatus