EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Orthologs

Description

Ensembl ID: ENSXETG00000023797 (Gene tree)
Gene ID: -
Gene Symbol: tsr1
Alias: -
Full Name: TSR1%2C ribosome maturation factor
Gene Type: protein_coding
Species: Xenopus_tropicalis
Status: putative
Strand: Minus strand
Length: 10493 bases
Position: chrGL172903.1:1197514-1208006
Accession: XB-GENE-5753585
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSXETP00000063908	AARP2CN	PF08142.12	9.4e-24	1	1
ENSXETP00000051315	AARP2CN	PF08142.12	9.9e-24	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSXETT00000061602	-	2235	-	ENSXETP00000063908	744 (aa)	-	F7CLL5
ENSXETT00000051315	-	2439	-	ENSXETP00000051315	812 (aa)	-	F7EDS6

Gene Model

Click here to download ENSXETG00000023797's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSXETG00000023797's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSXETG00000023797	tsr1	100	59.309	ENSG00000167721	TSR1	99	58.824	Homo_sapiens
ENSXETG00000023797	tsr1	100	51.282	ENSAPOG00000020891	tsr1	99	51.896	Acanthochromis_polyacanthus
ENSXETG00000023797	tsr1	100	60.502	ENSAMEG00000007599	TSR1	99	59.291	Ailuropoda_melanoleuca
ENSXETG00000023797	tsr1	100	52.814	ENSACIG00000007090	tsr1	99	53.012	Amphilophus_citrinellus
ENSXETG00000023797	tsr1	100	51.169	ENSAOCG00000023284	tsr1	99	51.786	Amphiprion_ocellaris
ENSXETG00000023797	tsr1	100	50.909	ENSAPEG00000008452	tsr1	100	51.210	Amphiprion_percula
ENSXETG00000023797	tsr1	100	52.699	ENSATEG00000021961	tsr1	99	52.656	Anabas_testudineus
ENSXETG00000023797	tsr1	99	60.214	ENSAPLG00000013422	TSR1	100	60.214	Anas_platyrhynchos
ENSXETG00000023797	tsr1	73	56.216	ENSACAG00000000859	TSR1	92	55.822	Anolis_carolinensis
ENSXETG00000023797	tsr1	100	60.372	ENSANAG00000031071	TSR1	99	59.191	Aotus_nancymaae
ENSXETG00000023797	tsr1	100	52.506	ENSACLG00000007595	tsr1	99	52.512	Astatotilapia_calliptera
ENSXETG00000023797	tsr1	51	56.410	ENSAMXG00000008470	tsr1	89	56.410	Astyanax_mexicanus
ENSXETG00000023797	tsr1	100	61.060	ENSBTAG00000004225	TSR1	99	60.172	Bos_taurus
ENSXETG00000023797	tsr1	96	35.037	WBGene00006497	tag-151	96	35.169	Caenorhabditis_elegans
ENSXETG00000023797	tsr1	98	60.270	ENSCJAG00000012456	TSR1	98	59.328	Callithrix_jacchus
ENSXETG00000023797	tsr1	100	59.682	ENSCAFG00000002106	-	99	58.578	Canis_familiaris
ENSXETG00000023797	tsr1	89	61.883	ENSCAFG00000019273	-	100	61.319	Canis_familiaris
ENSXETG00000023797	tsr1	100	59.814	ENSCAFG00020009728	TSR1	99	58.211	Canis_lupus_dingo
ENSXETG00000023797	tsr1	100	61.457	ENSCHIG00000023935	TSR1	99	60.662	Capra_hircus
ENSXETG00000023797	tsr1	100	60.239	ENSTSYG00000005468	TSR1	99	59.314	Carlito_syrichta
ENSXETG00000023797	tsr1	92	59.366	ENSCPOG00000014833	TSR1	99	58.443	Cavia_porcellus
ENSXETG00000023797	tsr1	92	59.078	ENSCCAG00000028962	TSR1	98	58.179	Cebus_capucinus
ENSXETG00000023797	tsr1	100	59.707	ENSCATG00000044262	TSR1	99	58.578	Cercocebus_atys
ENSXETG00000023797	tsr1	100	60.372	ENSCLAG00000005567	TSR1	99	59.191	Chinchilla_lanigera
ENSXETG00000023797	tsr1	100	59.707	ENSCSAG00000013788	TSR1	99	58.701	Chlorocebus_sabaeus
ENSXETG00000023797	tsr1	100	60.743	ENSCPBG00000020363	TSR1	98	60.244	Chrysemys_picta_bellii
ENSXETG00000023797	tsr1	96	42.356	ENSCING00000020658	-	99	42.105	Ciona_intestinalis
ENSXETG00000023797	tsr1	97	40.646	ENSCSAVG00000001875	-	100	40.441	Ciona_savignyi
ENSXETG00000023797	tsr1	99	55.451	ENSCANG00000033056	TSR1	95	62.542	Colobus_angolensis_palliatus
ENSXETG00000023797	tsr1	100	59.309	ENSCGRG00001023942	Tsr1	99	58.578	Cricetulus_griseus_chok1gshd
ENSXETG00000023797	tsr1	99	53.554	ENSCGRG00000013015	Tsr1	98	61.667	Cricetulus_griseus_crigri
ENSXETG00000023797	tsr1	100	50.597	ENSCSEG00000013009	tsr1	99	50.955	Cynoglossus_semilaevis
ENSXETG00000023797	tsr1	100	51.790	ENSCVAG00000000506	tsr1	100	52.273	Cyprinodon_variegatus
ENSXETG00000023797	tsr1	100	52.828	ENSDARG00000007744	tsr1	100	52.828	Danio_rerio
ENSXETG00000023797	tsr1	100	60.898	ENSDNOG00000004715	TSR1	99	62.590	Dasypus_novemcinctus
ENSXETG00000023797	tsr1	100	59.840	ENSDORG00000016371	-	99	58.528	Dipodomys_ordii
ENSXETG00000023797	tsr1	97	53.527	ENSDORG00000023234	-	99	52.290	Dipodomys_ordii
ENSXETG00000023797	tsr1	97	39.060	FBgn0037073	Tsr1	96	40.149	Drosophila_melanogaster
ENSXETG00000023797	tsr1	87	60.390	ENSETEG00000017534	TSR1	88	60.244	Echinops_telfairi
ENSXETG00000023797	tsr1	99	47.270	ENSEBUG00000013731	TSR1	98	47.382	Eptatretus_burgeri
ENSXETG00000023797	tsr1	100	61.620	ENSEASG00005009302	TSR1	97	60.588	Equus_asinus_asinus
ENSXETG00000023797	tsr1	100	61.467	ENSECAG00000009114	TSR1	99	60.565	Equus_caballus
ENSXETG00000023797	tsr1	100	52.257	ENSELUG00000020984	tsr1	96	52.262	Esox_lucius
ENSXETG00000023797	tsr1	100	60.823	ENSFCAG00000006313	TSR1	99	60.049	Felis_catus
ENSXETG00000023797	tsr1	100	61.733	ENSFALG00000006532	TSR1	99	59.927	Ficedula_albicollis
ENSXETG00000023797	tsr1	100	59.707	ENSFDAG00000006038	TSR1	99	58.211	Fukomys_damarensis
ENSXETG00000023797	tsr1	100	50.708	ENSFHEG00000003626	tsr1	99	52.076	Fundulus_heteroclitus
ENSXETG00000023797	tsr1	100	49.102	ENSGMOG00000010336	tsr1	100	48.982	Gadus_morhua
ENSXETG00000023797	tsr1	100	52.189	ENSGAFG00000012993	tsr1	99	52.788	Gambusia_affinis
ENSXETG00000023797	tsr1	100	52.300	ENSGACG00000010843	tsr1	100	52.096	Gasterosteus_aculeatus
ENSXETG00000023797	tsr1	100	60.505	ENSGAGG00000025619	-	99	60.394	Gopherus_agassizii
ENSXETG00000023797	tsr1	100	58.910	ENSGGOG00000001704	TSR1	99	58.824	Gorilla_gorilla
ENSXETG00000023797	tsr1	100	52.476	ENSHBUG00000017904	tsr1	100	52.097	Haplochromis_burtoni
ENSXETG00000023797	tsr1	100	53.386	ENSHGLG00000015688	-	98	52.558	Heterocephalus_glaber_female
ENSXETG00000023797	tsr1	100	60.505	ENSHGLG00000012806	-	99	59.436	Heterocephalus_glaber_female
ENSXETG00000023797	tsr1	100	60.505	ENSHGLG00100015392	TSR1	99	59.436	Heterocephalus_glaber_male
ENSXETG00000023797	tsr1	100	53.491	ENSHCOG00000001432	tsr1	99	53.204	Hippocampus_comes
ENSXETG00000023797	tsr1	100	53.800	ENSIPUG00000004618	tsr1	100	53.404	Ictalurus_punctatus
ENSXETG00000023797	tsr1	100	60.638	ENSSTOG00000011819	TSR1	99	59.681	Ictidomys_tridecemlineatus
ENSXETG00000023797	tsr1	98	56.199	ENSJJAG00000019505	Tsr1	95	55.000	Jaculus_jaculus
ENSXETG00000023797	tsr1	100	50.771	ENSKMAG00000005763	tsr1	99	52.262	Kryptolebias_marmoratus
ENSXETG00000023797	tsr1	100	50.324	ENSLBEG00000021823	tsr1	99	51.422	Labrus_bergylta
ENSXETG00000023797	tsr1	100	59.855	ENSLACG00000002197	TSR1	100	59.951	Latimeria_chalumnae
ENSXETG00000023797	tsr1	99	51.526	ENSLOCG00000006491	TSR1	99	50.916	Lepisosteus_oculatus
ENSXETG00000023797	tsr1	100	59.840	ENSMFAG00000021330	TSR1	99	58.824	Macaca_fascicularis
ENSXETG00000023797	tsr1	100	59.707	ENSMMUG00000017519	TSR1	99	58.701	Macaca_mulatta
ENSXETG00000023797	tsr1	100	59.761	ENSMNEG00000031382	TSR1	99	58.874	Macaca_nemestrina
ENSXETG00000023797	tsr1	100	59.574	ENSMLEG00000036733	TSR1	99	58.456	Mandrillus_leucophaeus
ENSXETG00000023797	tsr1	100	52.308	ENSMAMG00000017918	tsr1	99	52.471	Mastacembelus_armatus
ENSXETG00000023797	tsr1	100	52.230	ENSMZEG00005007477	tsr1	99	52.682	Maylandia_zebra
ENSXETG00000023797	tsr1	100	60.904	ENSMGAG00000005576	TSR1	99	60.394	Meleagris_gallopavo
ENSXETG00000023797	tsr1	100	61.436	ENSMICG00000012943	TSR1	99	60.294	Microcebus_murinus
ENSXETG00000023797	tsr1	100	60.027	ENSMOCG00000022764	Tsr1	99	58.426	Microtus_ochrogaster
ENSXETG00000023797	tsr1	100	52.153	ENSMMOG00000014280	tsr1	100	53.174	Mola_mola
ENSXETG00000023797	tsr1	99	58.988	ENSMODG00000010658	TSR1	99	59.006	Monodelphis_domestica
ENSXETG00000023797	tsr1	100	52.320	ENSMALG00000011681	tsr1	99	53.018	Monopterus_albus
ENSXETG00000023797	tsr1	100	60.345	MGP_CAROLIEiJ_G0016727	Tsr1	99	58.701	Mus_caroli
ENSXETG00000023797	tsr1	100	60.212	ENSMUSG00000038335	Tsr1	99	58.578	Mus_musculus
ENSXETG00000023797	tsr1	100	60.345	MGP_PahariEiJ_G0017864	Tsr1	99	58.701	Mus_pahari
ENSXETG00000023797	tsr1	100	60.212	MGP_SPRETEiJ_G0017570	Tsr1	99	58.578	Mus_spretus
ENSXETG00000023797	tsr1	89	62.332	ENSMPUG00000013000	TSR1	100	61.769	Mustela_putorius_furo
ENSXETG00000023797	tsr1	99	62.051	ENSMLUG00000003505	TSR1	99	60.736	Myotis_lucifugus
ENSXETG00000023797	tsr1	100	52.732	ENSNBRG00000020728	tsr1	99	52.864	Neolamprologus_brichardi
ENSXETG00000023797	tsr1	100	53.590	ENSNLEG00000017184	TSR1	99	54.412	Nomascus_leucogenys
ENSXETG00000023797	tsr1	99	56.913	ENSMEUG00000015828	TSR1	99	55.309	Notamacropus_eugenii
ENSXETG00000023797	tsr1	100	53.349	ENSONIG00000013131	tsr1	100	52.990	Oreochromis_niloticus
ENSXETG00000023797	tsr1	100	60.956	ENSOCUG00000014256	TSR1	99	60.000	Oryctolagus_cuniculus
ENSXETG00000023797	tsr1	100	53.129	ENSORLG00000004926	tsr1	99	53.373	Oryzias_latipes
ENSXETG00000023797	tsr1	100	53.191	ENSORLG00020008792	tsr1	99	53.499	Oryzias_latipes_hni
ENSXETG00000023797	tsr1	100	53.483	ENSORLG00015013838	tsr1	99	53.618	Oryzias_latipes_hsok
ENSXETG00000023797	tsr1	100	53.121	ENSOMEG00000004830	tsr1	99	52.544	Oryzias_melastigma
ENSXETG00000023797	tsr1	100	59.947	ENSOGAG00000004492	TSR1	99	59.367	Otolemur_garnettii
ENSXETG00000023797	tsr1	100	61.325	ENSOARG00000015437	TSR1	97	60.539	Ovis_aries
ENSXETG00000023797	tsr1	100	59.309	ENSPPAG00000036355	TSR1	99	58.824	Pan_paniscus
ENSXETG00000023797	tsr1	100	60.823	ENSPPRG00000015519	-	99	59.314	Panthera_pardus
ENSXETG00000023797	tsr1	100	60.823	ENSPTIG00000010608	TSR1	99	59.314	Panthera_tigris_altaica
ENSXETG00000023797	tsr1	100	59.309	ENSPTRG00000008547	TSR1	99	58.824	Pan_troglodytes
ENSXETG00000023797	tsr1	100	57.011	ENSPANG00000024463	TSR1	99	56.495	Papio_anubis
ENSXETG00000023797	tsr1	99	53.341	ENSPKIG00000013972	tsr1	99	53.098	Paramormyrops_kingsleyae
ENSXETG00000023797	tsr1	95	59.021	ENSPSIG00000018258	TSR1	99	59.467	Pelodiscus_sinensis
ENSXETG00000023797	tsr1	99	52.563	ENSPMGG00000011577	tsr1	99	54.424	Periophthalmus_magnuspinnatus
ENSXETG00000023797	tsr1	100	59.761	ENSPEMG00000018033	Tsr1	99	58.507	Peromyscus_maniculatus_bairdii
ENSXETG00000023797	tsr1	100	60.053	ENSPCIG00000009357	TSR1	97	59.608	Phascolarctos_cinereus
ENSXETG00000023797	tsr1	100	53.110	ENSPFOG00000004483	TSR1	100	53.405	Poecilia_formosa
ENSXETG00000023797	tsr1	100	52.179	ENSPLAG00000022320	tsr1	100	52.216	Poecilia_latipinna
ENSXETG00000023797	tsr1	100	52.179	ENSPMEG00000004577	tsr1	99	52.893	Poecilia_mexicana
ENSXETG00000023797	tsr1	97	52.121	ENSPREG00000010354	tsr1	96	52.791	Poecilia_reticulata
ENSXETG00000023797	tsr1	100	54.388	ENSPPYG00000007792	TSR1	99	53.309	Pongo_abelii
ENSXETG00000023797	tsr1	52	73.171	ENSPCAG00000012973	-	71	73.171	Procavia_capensis
ENSXETG00000023797	tsr1	100	60.638	ENSPCOG00000017928	TSR1	99	59.926	Propithecus_coquereli
ENSXETG00000023797	tsr1	100	60.239	ENSPVAG00000002162	TSR1	99	59.436	Pteropus_vampyrus
ENSXETG00000023797	tsr1	100	52.506	ENSPNYG00000016163	tsr1	99	52.512	Pundamilia_nyererei
ENSXETG00000023797	tsr1	100	52.886	ENSPNAG00000008659	tsr1	100	53.412	Pygocentrus_nattereri
ENSXETG00000023797	tsr1	100	59.338	ENSRNOG00000002980	Tsr1	99	59.164	Rattus_norvegicus
ENSXETG00000023797	tsr1	100	59.707	ENSRBIG00000040016	TSR1	99	58.824	Rhinopithecus_bieti
ENSXETG00000023797	tsr1	100	59.574	ENSRROG00000030361	TSR1	99	58.701	Rhinopithecus_roxellana
ENSXETG00000023797	tsr1	100	60.239	ENSSBOG00000020785	TSR1	99	59.314	Saimiri_boliviensis_boliviensis
ENSXETG00000023797	tsr1	100	58.653	ENSSHAG00000011394	TSR1	99	58.557	Sarcophilus_harrisii
ENSXETG00000023797	tsr1	99	53.809	ENSSFOG00015005455	tsr1	99	53.688	Scleropages_formosus
ENSXETG00000023797	tsr1	100	51.127	ENSSMAG00000009504	tsr1	100	52.432	Scophthalmus_maximus
ENSXETG00000023797	tsr1	100	52.482	ENSSDUG00000012074	tsr1	99	53.191	Seriola_dumerili
ENSXETG00000023797	tsr1	100	52.794	ENSSLDG00000002031	tsr1	99	53.325	Seriola_lalandi_dorsalis
ENSXETG00000023797	tsr1	93	59.193	ENSSARG00000000759	TSR1	93	57.760	Sorex_araneus
ENSXETG00000023797	tsr1	100	59.735	ENSSPUG00000007042	TSR1	99	59.337	Sphenodon_punctatus
ENSXETG00000023797	tsr1	100	50.469	ENSSPAG00000021951	tsr1	100	51.529	Stegastes_partitus
ENSXETG00000023797	tsr1	100	61.722	ENSSSCG00000038534	TSR1	99	60.539	Sus_scrofa
ENSXETG00000023797	tsr1	98	61.413	ENSTGUG00000005883	TSR1	100	61.413	Taeniopygia_guttata
ENSXETG00000023797	tsr1	100	52.941	ENSTRUG00000004665	tsr1	99	53.237	Takifugu_rubripes
ENSXETG00000023797	tsr1	100	52.810	ENSTNIG00000016196	tsr1	100	53.197	Tetraodon_nigroviridis
ENSXETG00000023797	tsr1	64	67.290	ENSTBEG00000015275	-	63	67.290	Tupaia_belangeri
ENSXETG00000023797	tsr1	100	60.927	ENSTTRG00000001177	TSR1	99	60.049	Tursiops_truncatus
ENSXETG00000023797	tsr1	99	61.067	ENSUAMG00000025160	TSR1	99	59.608	Ursus_americanus
ENSXETG00000023797	tsr1	99	60.823	ENSUMAG00000009294	TSR1	99	58.690	Ursus_maritimus
ENSXETG00000023797	tsr1	83	59.297	ENSVPAG00000000228	TSR1	99	58.382	Vicugna_pacos
ENSXETG00000023797	tsr1	100	59.284	ENSVVUG00000021767	TSR1	99	58.211	Vulpes_vulpes
ENSXETG00000023797	tsr1	100	53.181	ENSXCOG00000009635	tsr1	100	53.477	Xiphophorus_couchianus
ENSXETG00000023797	tsr1	100	52.133	ENSXMAG00000001397	tsr1	97	52.732	Xiphophorus_maculatus