EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSXETG00000024006 (Gene tree)
Gene ID: -
Gene Symbol: snai2
Alias: -
Full Name: Xenopus tropicalis snail family zinc finger 2 (snai2)%2C mRNA.
Gene Type: protein_coding
Species: Xenopus_tropicalis
Status: putative
Strand: Minus strand
Length: 3511 bases
Position: chrGL172719.1:623436-626946
Accession: NM_204093
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSXETP00000051787	zf-C2H2	PF00096.26	7.1e-27	1	5
ENSXETP00000051787	zf-C2H2	PF00096.26	7.1e-27	2	5
ENSXETP00000051787	zf-C2H2	PF00096.26	7.1e-27	3	5
ENSXETP00000051787	zf-C2H2	PF00096.26	7.1e-27	4	5
ENSXETP00000051787	zf-C2H2	PF00096.26	7.1e-27	5	5
ENSXETP00000051787	zf-met	PF12874.7	4e-07	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSXETT00000051787	-	1773	-	ENSXETP00000051787	266 (aa)	-	Q6DJ09

Gene Model

Click here to download ENSXETG00000024006's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSXETG00000024006's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSXETG00000024006	snai2	62	41.606	ENSXETG00000030307	-	99	41.606
ENSXETG00000024006	snai2	52	39.552	ENSXETG00000030967	-	94	39.552
ENSXETG00000024006	snai2	64	37.778	ENSXETG00000025282	-	99	37.778
ENSXETG00000024006	snai2	62	36.975	ENSXETG00000015125	-	96	42.105
ENSXETG00000024006	snai2	63	38.053	ENSXETG00000023643	znf484	99	41.071
ENSXETG00000024006	snai2	59	36.283	ENSXETG00000001910	znf646	98	38.333
ENSXETG00000024006	snai2	70	35.075	ENSXETG00000033098	ZNF366	61	35.075
ENSXETG00000024006	snai2	52	38.806	ENSXETG00000033508	-	67	38.806
ENSXETG00000024006	snai2	61	37.778	ENSXETG00000031310	-	67	37.778
ENSXETG00000024006	snai2	72	45.333	ENSXETG00000006575	znf420	90	45.333
ENSXETG00000024006	snai2	52	39.623	ENSXETG00000016062	znf184	90	39.623
ENSXETG00000024006	snai2	64	41.270	ENSXETG00000001911	znf668	99	41.270
ENSXETG00000024006	snai2	59	39.552	ENSXETG00000026673	-	91	39.552
ENSXETG00000024006	snai2	51	41.791	ENSXETG00000017175	-	99	41.791
ENSXETG00000024006	snai2	54	44.304	ENSXETG00000012506	znf91	99	44.304
ENSXETG00000024006	snai2	50	39.552	ENSXETG00000030249	-	50	39.552
ENSXETG00000024006	snai2	56	42.424	ENSXETG00000024118	-	99	42.424
ENSXETG00000024006	snai2	50	46.296	ENSXETG00000031460	-	83	46.296
ENSXETG00000024006	snai2	97	35.616	ENSXETG00000020587	ovol1	86	35.616
ENSXETG00000024006	snai2	57	41.304	ENSXETG00000002717	-	99	41.304
ENSXETG00000024006	snai2	52	40.299	ENSXETG00000031192	-	99	40.299
ENSXETG00000024006	snai2	55	37.500	ENSXETG00000010512	-	99	37.500
ENSXETG00000024006	snai2	54	34.559	ENSXETG00000001980	znf408	75	34.559
ENSXETG00000024006	snai2	53	37.234	ENSXETG00000006490	znf350	93	37.234
ENSXETG00000024006	snai2	54	39.568	ENSXETG00000027149	-	98	39.568
ENSXETG00000024006	snai2	73	35.593	ENSXETG00000006263	gfi1b	63	35.593
ENSXETG00000024006	snai2	96	39.130	ENSXETG00000027536	znf574	64	39.130
ENSXETG00000024006	snai2	62	43.243	ENSXETG00000008801	znf628	95	43.243
ENSXETG00000024006	snai2	53	47.887	ENSXETG00000034213	-	97	47.887
ENSXETG00000024006	snai2	85	38.686	ENSXETG00000002101	prdm5	80	38.686
ENSXETG00000024006	snai2	51	39.394	ENSXETG00000027484	znf432	61	39.394
ENSXETG00000024006	snai2	63	44.156	ENSXETG00000016781	-	99	46.835
ENSXETG00000024006	snai2	51	36.364	ENSXETG00000013882	-	99	36.364
ENSXETG00000024006	snai2	54	37.143	ENSXETG00000013744	znf319	75	35.075
ENSXETG00000024006	snai2	52	39.091	ENSXETG00000016091	e4f1	59	39.091
ENSXETG00000024006	snai2	100	63.194	ENSXETG00000027366	snai1	100	67.647
ENSXETG00000024006	snai2	55	40.441	ENSXETG00000023597	-	97	40.441
ENSXETG00000024006	snai2	54	39.552	ENSXETG00000002690	-	56	39.552
ENSXETG00000024006	snai2	51	38.686	ENSXETG00000032038	-	91	38.686

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSXETG00000024006	snai2	100	88.806	ENSG00000019549	SNAI2	100	88.806	Homo_sapiens
ENSXETG00000024006	snai2	99	49.310	ENSG00000185669	SNAI3	99	48.161	Homo_sapiens
ENSXETG00000024006	snai2	100	89.925	ENSAMEG00000009606	SNAI2	100	89.925	Ailuropoda_melanoleuca
ENSXETG00000024006	snai2	99	49.158	ENSANAG00000032748	SNAI3	99	49.158	Aotus_nancymaae
ENSXETG00000024006	snai2	100	89.179	ENSANAG00000021163	SNAI2	100	89.179	Aotus_nancymaae
ENSXETG00000024006	snai2	99	46.758	ENSBTAG00000017528	SNAI3	99	47.619	Bos_taurus
ENSXETG00000024006	snai2	100	87.313	ENSBTAG00000013227	SNAI2	100	87.313	Bos_taurus
ENSXETG00000024006	snai2	100	88.806	ENSCJAG00000013499	SNAI2	100	88.806	Callithrix_jacchus
ENSXETG00000024006	snai2	100	89.925	ENSCAFG00000006638	SNAI2	100	89.925	Canis_familiaris
ENSXETG00000024006	snai2	100	89.925	ENSCAFG00020015384	SNAI2	100	89.925	Canis_lupus_dingo
ENSXETG00000024006	snai2	99	46.053	ENSCHIG00000018087	SNAI3	99	45.395	Capra_hircus
ENSXETG00000024006	snai2	100	86.940	ENSCHIG00000024410	SNAI2	100	86.940	Capra_hircus
ENSXETG00000024006	snai2	90	90.041	ENSTSYG00000030892	SNAI2	90	90.041	Carlito_syrichta
ENSXETG00000024006	snai2	54	71.333	ENSTSYG00000025594	SNAI3	52	71.333	Carlito_syrichta
ENSXETG00000024006	snai2	83	90.583	ENSCAPG00000013078	SNAI2	100	90.583	Cavia_aperea
ENSXETG00000024006	snai2	100	88.806	ENSCCAG00000024100	SNAI2	100	88.806	Cebus_capucinus
ENSXETG00000024006	snai2	99	50.685	ENSCATG00000031714	SNAI3	99	50.685	Cercocebus_atys
ENSXETG00000024006	snai2	100	88.806	ENSCATG00000028656	SNAI2	100	88.806	Cercocebus_atys
ENSXETG00000024006	snai2	100	89.925	ENSCLAG00000011797	SNAI2	100	89.925	Chinchilla_lanigera
ENSXETG00000024006	snai2	100	88.806	ENSCSAG00000014787	SNAI2	100	88.806	Chlorocebus_sabaeus
ENSXETG00000024006	snai2	100	90.672	ENSCPBG00000020255	SNAI2	100	90.672	Chrysemys_picta_bellii
ENSXETG00000024006	snai2	99	52.862	ENSCPBG00000023474	SNAI3	99	52.862	Chrysemys_picta_bellii
ENSXETG00000024006	snai2	50	65.672	ENSCSAVG00000009819	-	69	65.672	Ciona_savignyi
ENSXETG00000024006	snai2	100	88.806	ENSCANG00000029656	SNAI2	100	88.806	Colobus_angolensis_palliatus
ENSXETG00000024006	snai2	99	48.276	ENSCGRG00001011389	Snai3	99	48.276	Cricetulus_griseus_chok1gshd
ENSXETG00000024006	snai2	100	88.806	ENSCGRG00001013674	Snai2	100	88.806	Cricetulus_griseus_chok1gshd
ENSXETG00000024006	snai2	100	88.806	ENSCGRG00000012119	Snai2	100	88.806	Cricetulus_griseus_crigri
ENSXETG00000024006	snai2	99	48.276	ENSCGRG00000014932	Snai3	99	48.276	Cricetulus_griseus_crigri
ENSXETG00000024006	snai2	100	87.218	ENSDORG00000029620	Snai2	100	87.218	Dipodomys_ordii
ENSXETG00000024006	snai2	98	81.132	ENSEEUG00000000841	SNAI3	99	43.269	Erinaceus_europaeus
ENSXETG00000024006	snai2	99	55.290	ENSELUG00000018742	-	99	55.290	Esox_lucius
ENSXETG00000024006	snai2	100	77.985	ENSELUG00000021795	SNAI2	79	80.224	Esox_lucius
ENSXETG00000024006	snai2	98	46.209	ENSFCAG00000043885	SNAI3	99	46.209	Felis_catus
ENSXETG00000024006	snai2	89	63.713	ENSFALG00000012974	-	98	65.145	Ficedula_albicollis
ENSXETG00000024006	snai2	100	89.179	ENSFDAG00000016958	SNAI2	100	89.179	Fukomys_damarensis
ENSXETG00000024006	snai2	99	50.512	ENSGAGG00000023571	SNAI3	99	50.512	Gopherus_agassizii
ENSXETG00000024006	snai2	100	90.672	ENSGAGG00000000426	SNAI2	100	90.672	Gopherus_agassizii
ENSXETG00000024006	snai2	100	88.806	ENSGGOG00000000959	SNAI2	100	88.806	Gorilla_gorilla
ENSXETG00000024006	snai2	99	49.180	ENSGGOG00000012559	SNAI3	99	49.180	Gorilla_gorilla
ENSXETG00000024006	snai2	100	74.906	ENSHCOG00000019435	SNAI2	100	74.906	Hippocampus_comes
ENSXETG00000024006	snai2	100	70.149	ENSIPUG00000000131	snai2	100	70.149	Ictalurus_punctatus
ENSXETG00000024006	snai2	100	89.179	ENSSTOG00000028743	SNAI2	100	89.179	Ictidomys_tridecemlineatus
ENSXETG00000024006	snai2	99	47.619	ENSJJAG00000019934	Snai3	99	47.619	Jaculus_jaculus
ENSXETG00000024006	snai2	53	85.714	ENSLOCG00000004887	SNAI3	86	85.714	Lepisosteus_oculatus
ENSXETG00000024006	snai2	100	88.060	ENSLOCG00000005992	SNAI2	100	88.060	Lepisosteus_oculatus
ENSXETG00000024006	snai2	100	88.806	ENSLAFG00000009299	SNAI2	100	88.806	Loxodonta_africana
ENSXETG00000024006	snai2	99	56.827	ENSLAFG00000005117	SNAI3	99	56.827	Loxodonta_africana
ENSXETG00000024006	snai2	100	88.806	ENSMFAG00000046061	SNAI2	100	88.806	Macaca_fascicularis
ENSXETG00000024006	snai2	99	51.027	ENSMFAG00000032064	SNAI3	99	51.027	Macaca_fascicularis
ENSXETG00000024006	snai2	99	51.027	ENSMMUG00000008716	SNAI3	99	51.027	Macaca_mulatta
ENSXETG00000024006	snai2	100	88.806	ENSMMUG00000016195	SNAI2	100	88.806	Macaca_mulatta
ENSXETG00000024006	snai2	100	88.806	ENSMNEG00000034216	SNAI2	100	88.806	Macaca_nemestrina
ENSXETG00000024006	snai2	99	51.027	ENSMNEG00000045515	SNAI3	99	51.027	Macaca_nemestrina
ENSXETG00000024006	snai2	100	88.806	ENSMLEG00000034407	SNAI2	100	88.806	Mandrillus_leucophaeus
ENSXETG00000024006	snai2	100	88.433	ENSMAUG00000008119	Snai2	100	88.433	Mesocricetus_auratus
ENSXETG00000024006	snai2	99	46.284	ENSMAUG00000001685	Snai3	99	46.284	Mesocricetus_auratus
ENSXETG00000024006	snai2	100	88.060	ENSMOCG00000006622	Snai2	100	88.060	Microtus_ochrogaster
ENSXETG00000024006	snai2	99	47.423	ENSMOCG00000003536	Snai3	99	47.423	Microtus_ochrogaster
ENSXETG00000024006	snai2	100	91.045	ENSMODG00000010173	SNAI2	100	91.045	Monodelphis_domestica
ENSXETG00000024006	snai2	99	44.781	MGP_CAROLIEiJ_G0031662	Snai3	99	44.781	Mus_caroli
ENSXETG00000024006	snai2	100	88.476	MGP_CAROLIEiJ_G0020483	Snai2	100	88.476	Mus_caroli
ENSXETG00000024006	snai2	100	88.848	ENSMUSG00000022676	Snai2	100	88.848	Mus_musculus
ENSXETG00000024006	snai2	99	46.897	MGP_PahariEiJ_G0023260	Snai3	99	46.897	Mus_pahari
ENSXETG00000024006	snai2	100	88.476	MGP_PahariEiJ_G0016188	Snai2	100	88.476	Mus_pahari
ENSXETG00000024006	snai2	100	88.848	MGP_SPRETEiJ_G0021379	Snai2	100	88.848	Mus_spretus
ENSXETG00000024006	snai2	52	76.812	ENSMPUG00000008104	SNAI3	99	47.945	Mustela_putorius_furo
ENSXETG00000024006	snai2	100	89.925	ENSMPUG00000010793	SNAI2	100	89.925	Mustela_putorius_furo
ENSXETG00000024006	snai2	100	88.433	ENSMLUG00000001086	SNAI2	100	88.433	Myotis_lucifugus
ENSXETG00000024006	snai2	99	46.075	ENSNGAG00000023039	Snai3	99	46.075	Nannospalax_galili
ENSXETG00000024006	snai2	99	49.158	ENSNLEG00000000595	SNAI3	99	49.158	Nomascus_leucogenys
ENSXETG00000024006	snai2	100	89.179	ENSNLEG00000013421	SNAI2	100	89.179	Nomascus_leucogenys
ENSXETG00000024006	snai2	97	90.421	ENSMEUG00000009510	SNAI2	100	90.421	Notamacropus_eugenii
ENSXETG00000024006	snai2	100	88.806	ENSOANG00000007267	SNAI2	100	88.806	Ornithorhynchus_anatinus
ENSXETG00000024006	snai2	99	49.129	ENSOGAG00000000419	SNAI3	99	47.973	Otolemur_garnettii
ENSXETG00000024006	snai2	100	86.940	ENSOARG00000013030	SNAI2	100	86.940	Ovis_aries
ENSXETG00000024006	snai2	99	48.639	ENSPPAG00000043301	SNAI3	99	48.525	Pan_paniscus
ENSXETG00000024006	snai2	100	88.806	ENSPPAG00000015662	SNAI2	100	88.806	Pan_paniscus
ENSXETG00000024006	snai2	98	45.423	ENSPPRG00000008511	SNAI3	99	45.423	Panthera_pardus
ENSXETG00000024006	snai2	100	90.299	ENSPPRG00000012562	-	100	90.299	Panthera_pardus
ENSXETG00000024006	snai2	90	90.909	ENSPTIG00000007593	SNAI2	77	90.909	Panthera_tigris_altaica
ENSXETG00000024006	snai2	99	48.980	ENSPTRG00000008460	SNAI3	99	48.852	Pan_troglodytes
ENSXETG00000024006	snai2	100	88.806	ENSPTRG00000020235	SNAI2	100	88.806	Pan_troglodytes
ENSXETG00000024006	snai2	99	51.027	ENSPANG00000000509	SNAI3	99	51.027	Papio_anubis
ENSXETG00000024006	snai2	100	88.806	ENSPANG00000017540	SNAI2	100	88.806	Papio_anubis
ENSXETG00000024006	snai2	100	82.090	ENSPKIG00000002254	SNAI2	100	84.701	Paramormyrops_kingsleyae
ENSXETG00000024006	snai2	99	55.709	ENSPKIG00000007872	SNAI3	99	55.709	Paramormyrops_kingsleyae
ENSXETG00000024006	snai2	100	90.299	ENSPSIG00000016395	SNAI2	100	90.299	Pelodiscus_sinensis
ENSXETG00000024006	snai2	53	80.282	ENSPSIG00000004262	SNAI3	56	80.282	Pelodiscus_sinensis
ENSXETG00000024006	snai2	100	75.746	ENSPMGG00000013179	SNAI2	100	78.358	Periophthalmus_magnuspinnatus
ENSXETG00000024006	snai2	100	88.060	ENSPEMG00000011739	Snai2	100	88.060	Peromyscus_maniculatus_bairdii
ENSXETG00000024006	snai2	100	91.045	ENSPCIG00000025156	SNAI2	100	91.045	Phascolarctos_cinereus
ENSXETG00000024006	snai2	90	77.686	ENSPREG00000008528	SNAI2	86	80.579	Poecilia_reticulata
ENSXETG00000024006	snai2	99	48.639	ENSPPYG00000007643	SNAI3	99	48.852	Pongo_abelii
ENSXETG00000024006	snai2	100	88.806	ENSPPYG00000018578	SNAI2	100	88.806	Pongo_abelii
ENSXETG00000024006	snai2	100	89.925	ENSPCOG00000015656	SNAI2	100	89.925	Propithecus_coquereli
ENSXETG00000024006	snai2	100	89.552	ENSPVAG00000009457	SNAI2	100	89.552	Pteropus_vampyrus
ENSXETG00000024006	snai2	99	47.387	ENSRNOG00000013586	Snai3	99	47.387	Rattus_norvegicus
ENSXETG00000024006	snai2	100	88.806	ENSRBIG00000041133	SNAI2	100	88.806	Rhinopithecus_bieti
ENSXETG00000024006	snai2	99	51.186	ENSRBIG00000025770	SNAI3	99	51.186	Rhinopithecus_bieti
ENSXETG00000024006	snai2	100	88.806	ENSRROG00000032273	SNAI2	100	88.806	Rhinopithecus_roxellana
ENSXETG00000024006	snai2	99	50.492	ENSRROG00000032757	SNAI3	99	50.492	Rhinopithecus_roxellana
ENSXETG00000024006	snai2	100	88.806	ENSSBOG00000035774	SNAI2	100	88.806	Saimiri_boliviensis_boliviensis
ENSXETG00000024006	snai2	100	91.045	ENSSHAG00000004205	SNAI2	100	91.045	Sarcophilus_harrisii
ENSXETG00000024006	snai2	100	81.111	ENSSFOG00015018025	SNAI2	100	83.704	Scleropages_formosus
ENSXETG00000024006	snai2	99	51.827	ENSSFOG00015016115	snai3	93	52.159	Scleropages_formosus
ENSXETG00000024006	snai2	100	90.299	ENSSPUG00000005427	-	100	90.299	Sphenodon_punctatus
ENSXETG00000024006	snai2	100	87.687	ENSSSCG00000039568	SNAI2	100	87.687	Sus_scrofa
ENSXETG00000024006	snai2	85	91.667	ENSUAMG00000014942	SNAI2	99	91.667	Ursus_americanus
ENSXETG00000024006	snai2	99	48.355	ENSUAMG00000020030	SNAI3	99	48.837	Ursus_americanus
ENSXETG00000024006	snai2	98	89.354	ENSUMAG00000006525	SNAI2	100	89.354	Ursus_maritimus
ENSXETG00000024006	snai2	99	48.789	ENSVVUG00000003233	SNAI3	99	47.099	Vulpes_vulpes
ENSXETG00000024006	snai2	100	89.552	ENSVVUG00000017625	SNAI2	100	89.552	Vulpes_vulpes