EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Orthologs

Description

Ensembl ID: ENSXETG00000024057 (Gene tree)
Gene ID: -
Gene Symbol: prpf18
Alias: -
Full Name: pre-mRNA processing factor 18
Gene Type: protein_coding
Species: Xenopus_tropicalis
Status: putative
Strand: Plus strand
Length: 8317 bases
Position: chrGL172650.1:2435777-2444093
Accession: XB-GENE-5838397
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSXETP00000051889	PRP4	PF08799.11	1.6e-11	1	1
ENSXETP00000051889	Prp18	PF02840.15	4.7e-62	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSXETT00000051889	-	1038	-	ENSXETP00000051889	345 (aa)	-	F7DN99

Gene Model

Click here to download ENSXETG00000024057's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSXETG00000024057's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSXETG00000024057	prpf18	100	80.580	ENSG00000165630	PRPF18	100	80.580	Homo_sapiens
ENSXETG00000024057	prpf18	100	76.812	ENSAPOG00000024177	prpf18	100	76.522	Acanthochromis_polyacanthus
ENSXETG00000024057	prpf18	100	80.580	ENSAMEG00000013591	-	100	80.580	Ailuropoda_melanoleuca
ENSXETG00000024057	prpf18	100	76.812	ENSACIG00000001186	prpf18	100	77.101	Amphilophus_citrinellus
ENSXETG00000024057	prpf18	98	76.627	ENSAOCG00000006572	prpf18	94	73.926	Amphiprion_ocellaris
ENSXETG00000024057	prpf18	100	77.101	ENSAPEG00000004564	prpf18	100	76.812	Amphiprion_percula
ENSXETG00000024057	prpf18	100	75.652	ENSATEG00000000303	prpf18	100	75.942	Anabas_testudineus
ENSXETG00000024057	prpf18	99	79.300	ENSAPLG00000003387	-	99	79.300	Anas_platyrhynchos
ENSXETG00000024057	prpf18	100	80.115	ENSACAG00000000818	-	100	80.115	Anolis_carolinensis
ENSXETG00000024057	prpf18	100	80.580	ENSANAG00000037445	-	100	80.580	Aotus_nancymaae
ENSXETG00000024057	prpf18	100	75.942	ENSACLG00000026296	prpf18	100	76.232	Astatotilapia_calliptera
ENSXETG00000024057	prpf18	100	75.637	ENSAMXG00000012848	prpf18	100	75.637	Astyanax_mexicanus
ENSXETG00000024057	prpf18	100	80.580	ENSBTAG00000017244	PRPF18	100	80.580	Bos_taurus
ENSXETG00000024057	prpf18	98	38.793	WBGene00009320	F32B6.3	97	38.793	Caenorhabditis_elegans
ENSXETG00000024057	prpf18	100	80.580	ENSCJAG00000009432	-	100	80.580	Callithrix_jacchus
ENSXETG00000024057	prpf18	100	80.580	ENSCAFG00000004735	-	100	80.580	Canis_familiaris
ENSXETG00000024057	prpf18	100	80.580	ENSCAFG00020007712	-	100	80.580	Canis_lupus_dingo
ENSXETG00000024057	prpf18	100	80.580	ENSCHIG00000000499	-	100	80.580	Capra_hircus
ENSXETG00000024057	prpf18	100	80.290	ENSTSYG00000003517	-	100	80.290	Carlito_syrichta
ENSXETG00000024057	prpf18	100	80.580	ENSCPOG00000021069	-	100	80.580	Cavia_porcellus
ENSXETG00000024057	prpf18	100	80.580	ENSCCAG00000036822	-	100	80.580	Cebus_capucinus
ENSXETG00000024057	prpf18	100	70.725	ENSCATG00000016633	-	100	71.884	Cercocebus_atys
ENSXETG00000024057	prpf18	100	80.290	ENSCLAG00000011770	-	100	80.290	Chinchilla_lanigera
ENSXETG00000024057	prpf18	100	79.379	ENSCSAG00000013109	-	100	78.933	Chlorocebus_sabaeus
ENSXETG00000024057	prpf18	100	78.552	ENSCPBG00000003100	-	100	79.109	Chrysemys_picta_bellii
ENSXETG00000024057	prpf18	99	53.936	ENSCING00000020481	-	97	53.936	Ciona_intestinalis
ENSXETG00000024057	prpf18	99	53.026	ENSCSAVG00000010546	-	99	53.026	Ciona_savignyi
ENSXETG00000024057	prpf18	100	80.290	ENSCANG00000034900	-	100	80.290	Colobus_angolensis_palliatus
ENSXETG00000024057	prpf18	100	80.580	ENSCGRG00001023665	Prpf18	100	80.580	Cricetulus_griseus_chok1gshd
ENSXETG00000024057	prpf18	100	80.580	ENSCGRG00000014690	Prpf18	100	80.580	Cricetulus_griseus_crigri
ENSXETG00000024057	prpf18	100	76.232	ENSCSEG00000005536	prpf18	99	76.232	Cynoglossus_semilaevis
ENSXETG00000024057	prpf18	100	75.072	ENSCVAG00000012401	prpf18	100	75.362	Cyprinodon_variegatus
ENSXETG00000024057	prpf18	100	78.551	ENSDARG00000058306	prpf18	100	78.551	Danio_rerio
ENSXETG00000024057	prpf18	100	80.000	ENSDNOG00000035607	-	100	80.000	Dasypus_novemcinctus
ENSXETG00000024057	prpf18	100	80.290	ENSDORG00000000858	Prpf18	100	80.290	Dipodomys_ordii
ENSXETG00000024057	prpf18	99	50.877	FBgn0027784	Prp18	98	50.877	Drosophila_melanogaster
ENSXETG00000024057	prpf18	100	71.014	ENSETEG00000015060	-	100	71.014	Echinops_telfairi
ENSXETG00000024057	prpf18	100	64.857	ENSEBUG00000016502	prpf18	99	64.857	Eptatretus_burgeri
ENSXETG00000024057	prpf18	100	80.870	ENSEASG00005019373	-	100	80.870	Equus_asinus_asinus
ENSXETG00000024057	prpf18	100	80.870	ENSECAG00000006997	PRPF18	100	80.870	Equus_caballus
ENSXETG00000024057	prpf18	74	100.000	ENSEEUG00000001171	-	79	100.000	Erinaceus_europaeus
ENSXETG00000024057	prpf18	100	77.233	ENSELUG00000022190	prpf18	100	77.233	Esox_lucius
ENSXETG00000024057	prpf18	100	80.580	ENSFCAG00000004436	-	100	80.580	Felis_catus
ENSXETG00000024057	prpf18	92	77.846	ENSFALG00000001912	-	97	78.049	Ficedula_albicollis
ENSXETG00000024057	prpf18	93	82.555	ENSFDAG00000014026	-	99	82.555	Fukomys_damarensis
ENSXETG00000024057	prpf18	99	55.043	ENSFDAG00000010713	-	97	55.043	Fukomys_damarensis
ENSXETG00000024057	prpf18	77	83.521	ENSFHEG00000020125	prpf18	98	83.521	Fundulus_heteroclitus
ENSXETG00000024057	prpf18	99	75.291	ENSGMOG00000012210	prpf18	99	75.291	Gadus_morhua
ENSXETG00000024057	prpf18	100	80.290	ENSGALG00000043593	-	100	80.290	Gallus_gallus
ENSXETG00000024057	prpf18	100	75.362	ENSGAFG00000006034	prpf18	100	75.652	Gambusia_affinis
ENSXETG00000024057	prpf18	100	73.913	ENSGACG00000012232	prpf18	100	73.913	Gasterosteus_aculeatus
ENSXETG00000024057	prpf18	100	82.029	ENSGAGG00000016878	-	100	82.029	Gopherus_agassizii
ENSXETG00000024057	prpf18	92	79.937	ENSGGOG00000025188	-	96	79.937	Gorilla_gorilla
ENSXETG00000024057	prpf18	100	75.942	ENSHBUG00000010264	prpf18	100	76.232	Haplochromis_burtoni
ENSXETG00000024057	prpf18	100	80.580	ENSHGLG00000018534	PRPF18	100	80.580	Heterocephalus_glaber_female
ENSXETG00000024057	prpf18	93	82.866	ENSHGLG00100012161	-	97	82.866	Heterocephalus_glaber_male
ENSXETG00000024057	prpf18	100	75.652	ENSHCOG00000015987	prpf18	100	75.942	Hippocampus_comes
ENSXETG00000024057	prpf18	100	74.221	ENSIPUG00000007432	prpf18	100	75.071	Ictalurus_punctatus
ENSXETG00000024057	prpf18	100	79.420	ENSSTOG00000008735	-	100	79.420	Ictidomys_tridecemlineatus
ENSXETG00000024057	prpf18	100	80.580	ENSJJAG00000024041	-	100	80.580	Jaculus_jaculus
ENSXETG00000024057	prpf18	100	58.286	ENSJJAG00000015191	-	100	58.571	Jaculus_jaculus
ENSXETG00000024057	prpf18	100	75.072	ENSKMAG00000012124	prpf18	100	75.362	Kryptolebias_marmoratus
ENSXETG00000024057	prpf18	97	74.405	ENSLBEG00000028466	prpf18	98	74.702	Labrus_bergylta
ENSXETG00000024057	prpf18	100	80.000	ENSLACG00000009885	prpf18	100	80.347	Latimeria_chalumnae
ENSXETG00000024057	prpf18	100	82.029	ENSLOCG00000016736	prpf18	100	82.029	Lepisosteus_oculatus
ENSXETG00000024057	prpf18	100	80.580	ENSLAFG00000007753	-	100	80.580	Loxodonta_africana
ENSXETG00000024057	prpf18	100	80.580	ENSMFAG00000000540	-	100	80.580	Macaca_fascicularis
ENSXETG00000024057	prpf18	100	80.580	ENSMMUG00000015071	PRPF18	93	94.702	Macaca_mulatta
ENSXETG00000024057	prpf18	100	80.580	ENSMNEG00000024679	-	100	80.580	Macaca_nemestrina
ENSXETG00000024057	prpf18	100	65.507	ENSMLEG00000031715	-	100	65.507	Mandrillus_leucophaeus
ENSXETG00000024057	prpf18	100	75.652	ENSMAMG00000006610	prpf18	100	75.942	Mastacembelus_armatus
ENSXETG00000024057	prpf18	100	75.942	ENSMZEG00005019392	prpf18	100	76.232	Maylandia_zebra
ENSXETG00000024057	prpf18	100	80.290	ENSMGAG00000005023	-	100	80.290	Meleagris_gallopavo
ENSXETG00000024057	prpf18	100	80.290	ENSMICG00000006572	-	100	80.290	Microcebus_murinus
ENSXETG00000024057	prpf18	100	80.580	ENSMOCG00000021468	Prpf18	100	80.580	Microtus_ochrogaster
ENSXETG00000024057	prpf18	100	75.942	ENSMMOG00000013012	prpf18	100	76.232	Mola_mola
ENSXETG00000024057	prpf18	92	78.659	ENSMODG00000016902	-	91	78.182	Monodelphis_domestica
ENSXETG00000024057	prpf18	100	74.203	ENSMODG00000024043	-	100	74.203	Monodelphis_domestica
ENSXETG00000024057	prpf18	100	70.145	ENSMALG00000005486	prpf18	100	70.201	Monopterus_albus
ENSXETG00000024057	prpf18	100	80.290	MGP_CAROLIEiJ_G0023143	Prpf18	95	85.507	Mus_caroli
ENSXETG00000024057	prpf18	100	80.290	ENSMUSG00000039449	Prpf18	95	85.507	Mus_musculus
ENSXETG00000024057	prpf18	100	80.290	MGP_PahariEiJ_G0019203	Prpf18	95	85.507	Mus_pahari
ENSXETG00000024057	prpf18	100	80.000	MGP_SPRETEiJ_G0024061	Prpf18	95	85.507	Mus_spretus
ENSXETG00000024057	prpf18	100	80.290	ENSMPUG00000000938	-	100	80.290	Mustela_putorius_furo
ENSXETG00000024057	prpf18	100	80.580	ENSMLUG00000009200	-	100	80.580	Myotis_lucifugus
ENSXETG00000024057	prpf18	100	80.870	ENSNGAG00000012500	-	100	80.870	Nannospalax_galili
ENSXETG00000024057	prpf18	67	84.783	ENSNGAG00000023550	-	82	84.783	Nannospalax_galili
ENSXETG00000024057	prpf18	100	75.942	ENSNBRG00000001778	prpf18	100	76.232	Neolamprologus_brichardi
ENSXETG00000024057	prpf18	100	80.580	ENSNLEG00000012186	-	100	80.580	Nomascus_leucogenys
ENSXETG00000024057	prpf18	75	74.903	ENSMEUG00000005032	-	75	74.903	Notamacropus_eugenii
ENSXETG00000024057	prpf18	78	60.075	ENSOPRG00000002153	-	100	60.448	Ochotona_princeps
ENSXETG00000024057	prpf18	100	80.580	ENSODEG00000003770	-	100	80.580	Octodon_degus
ENSXETG00000024057	prpf18	98	76.036	ENSONIG00000014854	prpf18	96	76.331	Oreochromis_niloticus
ENSXETG00000024057	prpf18	100	80.290	ENSOANG00000015404	-	100	80.290	Ornithorhynchus_anatinus
ENSXETG00000024057	prpf18	100	80.290	ENSOCUG00000027756	-	93	82.555	Oryctolagus_cuniculus
ENSXETG00000024057	prpf18	100	74.571	ENSORLG00000010293	prpf18	100	74.857	Oryzias_latipes
ENSXETG00000024057	prpf18	100	75.652	ENSORLG00020001530	prpf18	100	75.942	Oryzias_latipes_hni
ENSXETG00000024057	prpf18	100	75.362	ENSORLG00015013705	prpf18	100	75.652	Oryzias_latipes_hsok
ENSXETG00000024057	prpf18	100	77.391	ENSOMEG00000009167	prpf18	100	76.812	Oryzias_melastigma
ENSXETG00000024057	prpf18	100	79.710	ENSOGAG00000007294	-	100	79.710	Otolemur_garnettii
ENSXETG00000024057	prpf18	100	78.531	ENSOARG00000006243	-	100	78.531	Ovis_aries
ENSXETG00000024057	prpf18	100	80.580	ENSPPAG00000041959	-	100	80.580	Pan_paniscus
ENSXETG00000024057	prpf18	100	80.580	ENSPPRG00000000107	-	100	80.580	Panthera_pardus
ENSXETG00000024057	prpf18	100	80.870	ENSPTIG00000021094	-	100	80.870	Panthera_tigris_altaica
ENSXETG00000024057	prpf18	100	80.580	ENSPTRG00000002306	PRPF18	100	80.580	Pan_troglodytes
ENSXETG00000024057	prpf18	100	80.870	ENSPANG00000023346	-	100	80.870	Papio_anubis
ENSXETG00000024057	prpf18	86	98.113	ENSPKIG00000014128	prpf18	96	76.338	Paramormyrops_kingsleyae
ENSXETG00000024057	prpf18	100	81.159	ENSPSIG00000016064	-	100	81.159	Pelodiscus_sinensis
ENSXETG00000024057	prpf18	100	72.464	ENSPMGG00000016486	prpf18	100	72.464	Periophthalmus_magnuspinnatus
ENSXETG00000024057	prpf18	100	80.580	ENSPEMG00000013704	Prpf18	100	80.580	Peromyscus_maniculatus_bairdii
ENSXETG00000024057	prpf18	100	71.633	ENSPMAG00000000204	prpf18	100	71.633	Petromyzon_marinus
ENSXETG00000024057	prpf18	92	79.937	ENSPCIG00000012963	-	99	79.937	Phascolarctos_cinereus
ENSXETG00000024057	prpf18	100	72.549	ENSPFOG00000017611	prpf18	100	72.829	Poecilia_formosa
ENSXETG00000024057	prpf18	100	74.783	ENSPLAG00000000369	prpf18	100	74.783	Poecilia_latipinna
ENSXETG00000024057	prpf18	100	74.783	ENSPMEG00000005183	prpf18	100	74.783	Poecilia_mexicana
ENSXETG00000024057	prpf18	100	75.652	ENSPREG00000015232	prpf18	100	75.652	Poecilia_reticulata
ENSXETG00000024057	prpf18	100	80.290	ENSPPYG00000002101	PRPF18	100	80.290	Pongo_abelii
ENSXETG00000024057	prpf18	100	62.609	ENSPCAG00000010833	-	100	62.609	Procavia_capensis
ENSXETG00000024057	prpf18	100	75.072	ENSPCOG00000013057	-	100	75.362	Propithecus_coquereli
ENSXETG00000024057	prpf18	100	47.246	ENSPVAG00000002947	-	100	47.246	Pteropus_vampyrus
ENSXETG00000024057	prpf18	100	75.652	ENSPNYG00000003554	prpf18	100	75.942	Pundamilia_nyererei
ENSXETG00000024057	prpf18	100	77.493	ENSPNAG00000023151	prpf18	100	77.493	Pygocentrus_nattereri
ENSXETG00000024057	prpf18	100	80.000	ENSRNOG00000018396	Prpf18	100	80.000	Rattus_norvegicus
ENSXETG00000024057	prpf18	100	80.000	ENSRBIG00000028028	-	100	80.000	Rhinopithecus_bieti
ENSXETG00000024057	prpf18	100	80.290	ENSRROG00000040695	-	100	80.290	Rhinopithecus_roxellana
ENSXETG00000024057	prpf18	54	30.151	YGR006W	-	79	30.049	Saccharomyces_cerevisiae
ENSXETG00000024057	prpf18	100	80.580	ENSSBOG00000034482	-	100	80.580	Saimiri_boliviensis_boliviensis
ENSXETG00000024057	prpf18	100	80.870	ENSSHAG00000016463	-	100	80.870	Sarcophilus_harrisii
ENSXETG00000024057	prpf18	100	68.406	ENSSHAG00000009669	-	100	68.406	Sarcophilus_harrisii
ENSXETG00000024057	prpf18	98	76.812	ENSSFOG00015022118	prpf18	100	71.795	Scleropages_formosus
ENSXETG00000024057	prpf18	78	42.910	ENSSFOG00015021154	-	89	48.069	Scleropages_formosus
ENSXETG00000024057	prpf18	100	74.783	ENSSMAG00000005308	prpf18	100	74.783	Scophthalmus_maximus
ENSXETG00000024057	prpf18	100	75.652	ENSSDUG00000015428	prpf18	100	75.942	Seriola_dumerili
ENSXETG00000024057	prpf18	100	75.652	ENSSLDG00000023989	prpf18	100	75.942	Seriola_lalandi_dorsalis
ENSXETG00000024057	prpf18	100	51.594	ENSSARG00000005307	-	100	51.594	Sorex_araneus
ENSXETG00000024057	prpf18	100	80.290	ENSSPUG00000002619	-	100	80.290	Sphenodon_punctatus
ENSXETG00000024057	prpf18	100	75.652	ENSSPAG00000019502	prpf18	100	75.942	Stegastes_partitus
ENSXETG00000024057	prpf18	100	80.580	ENSSSCG00000026354	-	100	80.580	Sus_scrofa
ENSXETG00000024057	prpf18	100	80.870	ENSTGUG00000002286	-	100	80.870	Taeniopygia_guttata
ENSXETG00000024057	prpf18	100	74.203	ENSTRUG00000011278	prpf18	100	74.493	Takifugu_rubripes
ENSXETG00000024057	prpf18	100	75.362	ENSTNIG00000000911	prpf18	100	75.072	Tetraodon_nigroviridis
ENSXETG00000024057	prpf18	79	96.154	ENSTBEG00000013011	-	79	96.154	Tupaia_belangeri
ENSXETG00000024057	prpf18	100	80.580	ENSTTRG00000011117	PRPF18	100	80.580	Tursiops_truncatus
ENSXETG00000024057	prpf18	91	82.484	ENSUAMG00000001815	-	93	82.484	Ursus_americanus
ENSXETG00000024057	prpf18	100	75.652	ENSUMAG00000012329	-	100	75.652	Ursus_maritimus
ENSXETG00000024057	prpf18	100	75.072	ENSVPAG00000011486	-	100	75.072	Vicugna_pacos
ENSXETG00000024057	prpf18	100	80.580	ENSVVUG00000005453	-	100	80.580	Vulpes_vulpes
ENSXETG00000024057	prpf18	100	74.640	ENSXCOG00000020414	prpf18	100	74.928	Xiphophorus_couchianus
ENSXETG00000024057	prpf18	100	75.072	ENSXMAG00000004713	prpf18	91	75.072	Xiphophorus_maculatus