EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSXETG00000024076 (Gene tree)
Gene ID: -
Gene Symbol: vars
Alias: -
Full Name: valyl-tRNA synthetase
Gene Type: protein_coding
Species: Xenopus_tropicalis
Status: putative
Strand: Minus strand
Length: 18348 bases
Position: chrGL173124.1:426835-445182
Accession: XB-GENE-487344
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSXETP00000051937	Anticodon_1	PF08264.13	4.4e-35	1	1
ENSXETP00000051937	tRNA-synt_1	PF00133.22	2e-172	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSXETT00000051937	-	3765	-	ENSXETP00000051937	1254 (aa)	-	F7CLG4

Gene Model

Click here to download ENSXETG00000024076's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSXETG00000024076's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSXETG00000024076	vars	76	46.266	ENSXETG00000003036	vars2	98	46.562

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSXETG00000024076	vars	98	62.055	ENSG00000204394	VARS	99	70.552	Homo_sapiens
ENSXETG00000024076	vars	98	64.355	ENSAPOG00000020691	vars	99	64.113	Acanthochromis_polyacanthus
ENSXETG00000024076	vars	98	64.355	ENSAPOG00000020921	vars	99	64.113	Acanthochromis_polyacanthus
ENSXETG00000024076	vars	98	62.571	ENSAMEG00000006417	VARS	96	63.166	Ailuropoda_melanoleuca
ENSXETG00000024076	vars	100	64.839	ENSACIG00000013752	vars	100	64.886	Amphilophus_citrinellus
ENSXETG00000024076	vars	100	65.089	ENSAOCG00000002447	vars	100	64.269	Amphiprion_ocellaris
ENSXETG00000024076	vars	100	65.089	ENSAPEG00000010638	vars	99	65.214	Amphiprion_percula
ENSXETG00000024076	vars	100	63.365	ENSATEG00000020219	vars	100	63.565	Anabas_testudineus
ENSXETG00000024076	vars	90	67.619	ENSACAG00000029133	-	99	68.312	Anolis_carolinensis
ENSXETG00000024076	vars	98	61.812	ENSANAG00000015453	VARS	96	62.652	Aotus_nancymaae
ENSXETG00000024076	vars	100	64.424	ENSACLG00000025699	vars	97	64.469	Astatotilapia_calliptera
ENSXETG00000024076	vars	94	63.796	ENSAMXG00000017716	vars	95	63.803	Astyanax_mexicanus
ENSXETG00000024076	vars	98	62.540	ENSBTAG00000005631	VARS	96	63.298	Bos_taurus
ENSXETG00000024076	vars	98	61.731	ENSCJAG00000002604	VARS	96	62.571	Callithrix_jacchus
ENSXETG00000024076	vars	98	62.379	ENSCAFG00000000636	VARS	96	62.975	Canis_familiaris
ENSXETG00000024076	vars	91	63.581	ENSCAFG00020020790	VARS	92	64.218	Canis_lupus_dingo
ENSXETG00000024076	vars	98	62.298	ENSCHIG00000011008	VARS	96	63.056	Capra_hircus
ENSXETG00000024076	vars	98	61.974	ENSTSYG00000001567	VARS	96	62.813	Carlito_syrichta
ENSXETG00000024076	vars	92	64.502	ENSCAPG00000013736	VARS	98	64.533	Cavia_aperea
ENSXETG00000024076	vars	98	62.783	ENSCPOG00000000870	VARS	96	62.813	Cavia_porcellus
ENSXETG00000024076	vars	98	62.460	ENSCCAG00000035656	VARS	100	59.701	Cebus_capucinus
ENSXETG00000024076	vars	98	62.945	ENSCATG00000022394	VARS	96	63.137	Cercocebus_atys
ENSXETG00000024076	vars	90	62.478	ENSCLAG00000009470	VARS	93	62.511	Chinchilla_lanigera
ENSXETG00000024076	vars	98	63.026	ENSCSAG00000008784	VARS	96	63.217	Chlorocebus_sabaeus
ENSXETG00000024076	vars	79	69.777	ENSCPBG00000007943	VARS	96	69.777	Chrysemys_picta_bellii
ENSXETG00000024076	vars	98	62.945	ENSCANG00000033570	VARS	96	63.137	Colobus_angolensis_palliatus
ENSXETG00000024076	vars	98	62.379	ENSCGRG00001005686	Vars	96	63.086	Cricetulus_griseus_chok1gshd
ENSXETG00000024076	vars	93	60.380	ENSCGRG00000013352	Vars	78	61.107	Cricetulus_griseus_crigri
ENSXETG00000024076	vars	100	63.220	ENSCSEG00000019652	vars	100	63.141	Cynoglossus_semilaevis
ENSXETG00000024076	vars	100	64.192	ENSCVAG00000022398	vars	100	64.469	Cyprinodon_variegatus
ENSXETG00000024076	vars	100	62.937	ENSDARG00000044575	vars	100	63.313	Danio_rerio
ENSXETG00000024076	vars	85	66.019	ENSDORG00000016433	Vars	95	66.019	Dipodomys_ordii
ENSXETG00000024076	vars	69	73.175	ENSETEG00000003824	VARS	77	73.175	Echinops_telfairi
ENSXETG00000024076	vars	58	64.472	ENSEBUG00000004637	vars	100	64.746	Eptatretus_burgeri
ENSXETG00000024076	vars	51	70.000	ENSEBUG00000007086	vars	83	69.932	Eptatretus_burgeri
ENSXETG00000024076	vars	98	62.460	ENSEASG00005015673	VARS	96	63.298	Equus_asinus_asinus
ENSXETG00000024076	vars	98	62.409	ENSECAG00000014620	VARS	96	63.005	Equus_caballus
ENSXETG00000024076	vars	71	69.424	ENSEEUG00000004116	VARS	73	69.424	Erinaceus_europaeus
ENSXETG00000024076	vars	100	63.040	ENSELUG00000006550	vars	97	62.886	Esox_lucius
ENSXETG00000024076	vars	98	62.379	ENSFCAG00000004510	VARS	96	62.945	Felis_catus
ENSXETG00000024076	vars	90	64.751	ENSFDAG00000011401	VARS	100	64.976	Fukomys_damarensis
ENSXETG00000024076	vars	100	63.700	ENSFHEG00000010672	vars	100	64.130	Fundulus_heteroclitus
ENSXETG00000024076	vars	93	65.149	ENSGMOG00000014908	vars	97	65.372	Gadus_morhua
ENSXETG00000024076	vars	100	64.022	ENSGAFG00000021630	vars	100	64.297	Gambusia_affinis
ENSXETG00000024076	vars	93	66.639	ENSGACG00000009601	vars	97	66.694	Gasterosteus_aculeatus
ENSXETG00000024076	vars	98	62.621	ENSGGOG00000011364	VARS	96	62.813	Gorilla_gorilla
ENSXETG00000024076	vars	100	64.424	ENSHBUG00000017151	vars	97	64.469	Haplochromis_burtoni
ENSXETG00000024076	vars	98	62.510	ENSHGLG00000011646	VARS	96	62.105	Heterocephalus_glaber_female
ENSXETG00000024076	vars	94	57.921	ENSHGLG00100018062	VARS	99	57.638	Heterocephalus_glaber_male
ENSXETG00000024076	vars	95	66.639	ENSHCOG00000012198	vars	95	66.776	Hippocampus_comes
ENSXETG00000024076	vars	100	64.019	ENSIPUG00000005218	vars	100	63.969	Ictalurus_punctatus
ENSXETG00000024076	vars	98	62.702	ENSSTOG00000013112	VARS	96	62.894	Ictidomys_tridecemlineatus
ENSXETG00000024076	vars	96	62.654	ENSJJAG00000019749	-	96	62.156	Jaculus_jaculus
ENSXETG00000024076	vars	96	53.636	ENSJJAG00000015343	-	98	53.251	Jaculus_jaculus
ENSXETG00000024076	vars	100	64.201	ENSKMAG00000009455	vars	100	64.437	Kryptolebias_marmoratus
ENSXETG00000024076	vars	100	63.420	ENSLBEG00000010341	vars	100	63.121	Labrus_bergylta
ENSXETG00000024076	vars	94	62.479	ENSLACG00000015232	VARS	99	62.562	Latimeria_chalumnae
ENSXETG00000024076	vars	100	66.667	ENSLOCG00000004240	vars	100	66.667	Lepisosteus_oculatus
ENSXETG00000024076	vars	98	62.591	ENSLAFG00000023090	VARS	96	62.702	Loxodonta_africana
ENSXETG00000024076	vars	98	62.945	ENSMFAG00000001032	VARS	96	63.137	Macaca_fascicularis
ENSXETG00000024076	vars	98	62.945	ENSMMUG00000006828	VARS	96	63.137	Macaca_mulatta
ENSXETG00000024076	vars	98	62.945	ENSMNEG00000042072	VARS	96	63.137	Macaca_nemestrina
ENSXETG00000024076	vars	98	62.945	ENSMLEG00000039307	VARS	96	63.137	Mandrillus_leucophaeus
ENSXETG00000024076	vars	100	64.025	ENSMAMG00000003949	vars	100	64.252	Mastacembelus_armatus
ENSXETG00000024076	vars	100	64.424	ENSMZEG00005018327	vars	100	62.983	Maylandia_zebra
ENSXETG00000024076	vars	98	62.621	ENSMAUG00000006715	Vars	96	63.328	Mesocricetus_auratus
ENSXETG00000024076	vars	98	62.298	ENSMICG00000003548	VARS	100	59.701	Microcebus_murinus
ENSXETG00000024076	vars	96	62.086	ENSMOCG00000015404	Vars	96	62.094	Microtus_ochrogaster
ENSXETG00000024076	vars	100	63.245	ENSMMOG00000015801	vars	100	63.088	Mola_mola
ENSXETG00000024076	vars	98	62.933	ENSMODG00000015204	-	96	62.933	Monodelphis_domestica
ENSXETG00000024076	vars	99	64.656	ENSMALG00000022532	vars	99	64.701	Monopterus_albus
ENSXETG00000024076	vars	98	62.753	MGP_CAROLIEiJ_G0021491	Vars	96	62.753	Mus_caroli
ENSXETG00000024076	vars	98	62.834	ENSMUSG00000007029	Vars	96	62.834	Mus_musculus
ENSXETG00000024076	vars	98	62.915	MGP_PahariEiJ_G0020486	Vars	96	62.915	Mus_pahari
ENSXETG00000024076	vars	98	62.834	MGP_SPRETEiJ_G0022396	Vars	96	62.834	Mus_spretus
ENSXETG00000024076	vars	98	62.217	ENSMPUG00000010821	VARS	96	62.813	Mustela_putorius_furo
ENSXETG00000024076	vars	75	64.456	ENSMLUG00000013126	VARS	95	65.557	Myotis_lucifugus
ENSXETG00000024076	vars	100	60.907	ENSNGAG00000012151	Vars	100	61.232	Nannospalax_galili
ENSXETG00000024076	vars	100	64.000	ENSNBRG00000020520	vars	100	64.043	Neolamprologus_brichardi
ENSXETG00000024076	vars	98	61.974	ENSNLEG00000006351	VARS	96	62.813	Nomascus_leucogenys
ENSXETG00000024076	vars	98	60.694	ENSMEUG00000011378	VARS	91	67.600	Notamacropus_eugenii
ENSXETG00000024076	vars	98	62.864	ENSOPRG00000003607	VARS	96	63.622	Ochotona_princeps
ENSXETG00000024076	vars	98	61.943	ENSODEG00000017681	VARS	96	61.943	Octodon_degus
ENSXETG00000024076	vars	100	64.025	ENSONIG00000013064	vars	99	68.394	Oreochromis_niloticus
ENSXETG00000024076	vars	77	62.857	ENSOANG00000005400	VARS	98	61.967	Ornithorhynchus_anatinus
ENSXETG00000024076	vars	98	61.215	ENSOCUG00000022463	VARS	96	60.757	Oryctolagus_cuniculus
ENSXETG00000024076	vars	100	63.936	ENSORLG00000013063	vars	100	64.055	Oryzias_latipes
ENSXETG00000024076	vars	100	63.692	ENSORLG00020003504	vars	100	64.198	Oryzias_latipes_hni
ENSXETG00000024076	vars	100	63.895	ENSORLG00015009001	vars	100	64.479	Oryzias_latipes_hsok
ENSXETG00000024076	vars	100	63.679	ENSOMEG00000015016	vars	100	63.953	Oryzias_melastigma
ENSXETG00000024076	vars	98	62.379	ENSOGAG00000007515	VARS	96	62.490	Otolemur_garnettii
ENSXETG00000024076	vars	98	62.136	ENSPPAG00000034012	VARS	96	62.975	Pan_paniscus
ENSXETG00000024076	vars	98	62.379	ENSPPRG00000014855	VARS	96	62.945	Panthera_pardus
ENSXETG00000024076	vars	85	65.498	ENSPTIG00000010462	VARS	95	65.198	Panthera_tigris_altaica
ENSXETG00000024076	vars	98	62.055	ENSPTRG00000017985	VARS	96	62.894	Pan_troglodytes
ENSXETG00000024076	vars	98	61.452	ENSPANG00000014565	VARS	96	61.644	Papio_anubis
ENSXETG00000024076	vars	100	63.938	ENSPKIG00000016304	vars	100	64.093	Paramormyrops_kingsleyae
ENSXETG00000024076	vars	100	63.931	ENSPMGG00000023909	vars	100	63.852	Periophthalmus_magnuspinnatus
ENSXETG00000024076	vars	98	62.540	ENSPEMG00000006639	Vars	96	63.379	Peromyscus_maniculatus_bairdii
ENSXETG00000024076	vars	98	62.288	ENSPCIG00000018553	VARS	96	62.288	Phascolarctos_cinereus
ENSXETG00000024076	vars	100	64.330	ENSPFOG00000015690	vars	100	64.606	Poecilia_formosa
ENSXETG00000024076	vars	100	65.750	ENSPLAG00000009590	vars	100	65.750	Poecilia_latipinna
ENSXETG00000024076	vars	100	64.330	ENSPMEG00000004708	vars	100	64.606	Poecilia_mexicana
ENSXETG00000024076	vars	100	62.334	ENSPREG00000013264	vars	100	61.454	Poecilia_reticulata
ENSXETG00000024076	vars	98	61.246	ENSPPYG00000016460	VARS	96	61.439	Pongo_abelii
ENSXETG00000024076	vars	83	65.889	ENSPCAG00000013565	VARS	81	65.889	Procavia_capensis
ENSXETG00000024076	vars	98	62.086	ENSPCOG00000010942	VARS	96	62.682	Propithecus_coquereli
ENSXETG00000024076	vars	98	61.259	ENSPVAG00000012403	VARS	96	61.452	Pteropus_vampyrus
ENSXETG00000024076	vars	100	64.424	ENSPNYG00000022511	vars	100	64.469	Pundamilia_nyererei
ENSXETG00000024076	vars	100	64.003	ENSPNAG00000020962	vars	100	64.031	Pygocentrus_nattereri
ENSXETG00000024076	vars	98	62.379	ENSRNOG00000000867	Vars	96	62.379	Rattus_norvegicus
ENSXETG00000024076	vars	98	62.864	ENSRBIG00000041669	VARS	96	63.056	Rhinopithecus_bieti
ENSXETG00000024076	vars	98	62.864	ENSRROG00000045490	VARS	96	63.056	Rhinopithecus_roxellana
ENSXETG00000024076	vars	98	61.650	ENSSBOG00000035402	VARS	96	62.490	Saimiri_boliviensis_boliviensis
ENSXETG00000024076	vars	91	64.665	ENSSHAG00000006937	VARS	89	64.665	Sarcophilus_harrisii
ENSXETG00000024076	vars	100	62.868	ENSSFOG00015014272	vars	99	69.849	Scleropages_formosus
ENSXETG00000024076	vars	100	63.003	ENSSMAG00000009596	vars	99	63.158	Scophthalmus_maximus
ENSXETG00000024076	vars	100	63.938	ENSSDUG00000014177	vars	100	64.109	Seriola_dumerili
ENSXETG00000024076	vars	100	64.093	ENSSLDG00000025316	vars	100	64.186	Seriola_lalandi_dorsalis
ENSXETG00000024076	vars	100	64.903	ENSSPAG00000017068	vars	100	64.953	Stegastes_partitus
ENSXETG00000024076	vars	98	62.086	ENSSSCG00000038950	VARS	96	62.682	Sus_scrofa
ENSXETG00000024076	vars	82	60.626	ENSTRUG00000012307	vars	98	60.340	Takifugu_rubripes
ENSXETG00000024076	vars	100	64.163	ENSTNIG00000008011	vars	97	67.279	Tetraodon_nigroviridis
ENSXETG00000024076	vars	98	55.923	ENSTTRG00000014128	VARS	92	61.687	Tursiops_truncatus
ENSXETG00000024076	vars	98	60.435	ENSUAMG00000010424	VARS	96	61.031	Ursus_americanus
ENSXETG00000024076	vars	98	56.858	ENSUMAG00000013486	VARS	96	56.858	Ursus_maritimus
ENSXETG00000024076	vars	98	62.652	ENSVVUG00000021323	VARS	99	60.797	Vulpes_vulpes
ENSXETG00000024076	vars	100	64.632	ENSXCOG00000019172	vars	100	64.914	Xiphophorus_couchianus
ENSXETG00000024076	vars	100	64.099	ENSXMAG00000010927	vars	100	64.374	Xiphophorus_maculatus