EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Orthologs

Description

Ensembl ID: ENSXETG00000024087 (Gene tree)
Gene ID: -
Gene Symbol: gnl1
Alias: -
Full Name: Xenopus tropicalis G protein nucleolar 1 (putative) (gnl1)%2C mRNA.
Gene Type: protein_coding
Species: Xenopus_tropicalis
Status: putative
Strand: Minus strand
Length: 15894 bases
Position: chrGL173124.1:676593-692486
Accession: NM_001078973
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSXETP00000051967	MMR_HSR1	PF01926.23	5.1e-14	1	1
ENSXETP00000061124	MMR_HSR1	PF01926.23	5.3e-14	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSXETT00000051967	-	1853	-	ENSXETP00000051967	593 (aa)	-	F7CFG5
ENSXETT00000060688	-	3661	-	ENSXETP00000061124	612 (aa)	-	Q0V995

Gene Model

Click here to download ENSXETG00000024087's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSXETG00000024087's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSXETG00000024087	gnl1	100	63.857	ENSG00000204590	GNL1	100	63.065	Homo_sapiens
ENSXETG00000024087	gnl1	95	56.110	ENSAPOG00000006315	gnl1	99	52.381	Acanthochromis_polyacanthus
ENSXETG00000024087	gnl1	100	63.651	ENSAMEG00000013421	GNL1	100	62.903	Ailuropoda_melanoleuca
ENSXETG00000024087	gnl1	100	54.618	ENSACIG00000013539	gnl1	90	56.966	Amphilophus_citrinellus
ENSXETG00000024087	gnl1	95	56.454	ENSAOCG00000008320	gnl1	99	52.951	Amphiprion_ocellaris
ENSXETG00000024087	gnl1	95	56.282	ENSAPEG00000011154	gnl1	99	52.623	Amphiprion_percula
ENSXETG00000024087	gnl1	100	55.573	ENSATEG00000020647	gnl1	89	58.318	Anabas_testudineus
ENSXETG00000024087	gnl1	100	62.916	ENSACAG00000010395	GNL1	87	69.203	Anolis_carolinensis
ENSXETG00000024087	gnl1	100	64.032	ENSANAG00000028106	GNL1	100	62.862	Aotus_nancymaae
ENSXETG00000024087	gnl1	95	56.799	ENSACLG00000025394	gnl1	99	53.429	Astatotilapia_calliptera
ENSXETG00000024087	gnl1	100	51.329	ENSAMXG00000016080	gnl1	99	51.329	Astyanax_mexicanus
ENSXETG00000024087	gnl1	100	63.916	ENSBTAG00000025516	GNL1	100	62.742	Bos_taurus
ENSXETG00000024087	gnl1	100	63.710	ENSCJAG00000019996	GNL1	100	62.862	Callithrix_jacchus
ENSXETG00000024087	gnl1	100	63.754	ENSCAFG00000000396	GNL1	100	62.581	Canis_familiaris
ENSXETG00000024087	gnl1	100	63.754	ENSCAFG00020017556	GNL1	100	62.581	Canis_lupus_dingo
ENSXETG00000024087	gnl1	100	63.754	ENSCHIG00000019763	GNL1	100	63.047	Capra_hircus
ENSXETG00000024087	gnl1	100	63.916	ENSTSYG00000000164	GNL1	100	62.742	Carlito_syrichta
ENSXETG00000024087	gnl1	88	60.662	ENSCAPG00000006662	GNL1	98	60.037	Cavia_aperea
ENSXETG00000024087	gnl1	100	61.489	ENSCPOG00000001944	GNL1	100	60.616	Cavia_porcellus
ENSXETG00000024087	gnl1	100	64.239	ENSCCAG00000037467	GNL1	100	63.065	Cebus_capucinus
ENSXETG00000024087	gnl1	100	64.078	ENSCATG00000045232	GNL1	100	63.226	Cercocebus_atys
ENSXETG00000024087	gnl1	92	60.946	ENSCLAG00000012557	GNL1	99	60.647	Chinchilla_lanigera
ENSXETG00000024087	gnl1	100	64.078	ENSCSAG00000008202	GNL1	100	63.226	Chlorocebus_sabaeus
ENSXETG00000024087	gnl1	88	58.178	ENSCHOG00000010907	GNL1	87	58.237	Choloepus_hoffmanni
ENSXETG00000024087	gnl1	100	63.651	ENSCPBG00000018821	GNL1	100	63.492	Chrysemys_picta_bellii
ENSXETG00000024087	gnl1	90	51.763	ENSCING00000014499	-	99	51.763	Ciona_intestinalis
ENSXETG00000024087	gnl1	95	51.053	ENSCSAVG00000007354	-	91	52.364	Ciona_savignyi
ENSXETG00000024087	gnl1	100	64.078	ENSCANG00000012933	GNL1	100	63.226	Colobus_angolensis_palliatus
ENSXETG00000024087	gnl1	100	63.371	ENSCGRG00001004986	Gnl1	100	61.148	Cricetulus_griseus_chok1gshd
ENSXETG00000024087	gnl1	92	62.105	ENSCGRG00000014309	Gnl1	99	60.172	Cricetulus_griseus_crigri
ENSXETG00000024087	gnl1	91	49.369	ENSCSEG00000019714	gnl1	89	49.369	Cynoglossus_semilaevis
ENSXETG00000024087	gnl1	91	57.885	ENSCVAG00000022650	gnl1	89	57.603	Cyprinodon_variegatus
ENSXETG00000024087	gnl1	90	56.831	ENSDARG00000061789	gnl1	99	52.019	Danio_rerio
ENSXETG00000024087	gnl1	100	54.823	ENSDNOG00000041571	GNL1	100	53.181	Dasypus_novemcinctus
ENSXETG00000024087	gnl1	93	42.301	FBgn0032882	Ns4	81	43.496	Drosophila_melanogaster
ENSXETG00000024087	gnl1	51	61.801	ENSETEG00000005518	-	100	59.813	Echinops_telfairi
ENSXETG00000024087	gnl1	51	54.902	ENSEBUG00000009531	-	75	60.227	Eptatretus_burgeri
ENSXETG00000024087	gnl1	100	63.754	ENSEASG00005018610	GNL1	100	61.601	Equus_asinus_asinus
ENSXETG00000024087	gnl1	100	63.916	ENSECAG00000023081	GNL1	100	62.742	Equus_caballus
ENSXETG00000024087	gnl1	90	57.782	ENSELUG00000006281	gnl1	90	56.446	Esox_lucius
ENSXETG00000024087	gnl1	100	64.078	ENSFCAG00000007676	GNL1	100	62.903	Felis_catus
ENSXETG00000024087	gnl1	87	61.940	ENSFDAG00000000584	GNL1	100	59.357	Fukomys_damarensis
ENSXETG00000024087	gnl1	90	57.741	ENSFHEG00000011353	gnl1	99	52.640	Fundulus_heteroclitus
ENSXETG00000024087	gnl1	92	57.245	ENSGMOG00000015224	gnl1	90	56.964	Gadus_morhua
ENSXETG00000024087	gnl1	91	58.993	ENSGAFG00000014611	gnl1	88	58.993	Gambusia_affinis
ENSXETG00000024087	gnl1	94	55.226	ENSGACG00000009765	gnl1	91	55.185	Gasterosteus_aculeatus
ENSXETG00000024087	gnl1	100	64.019	ENSGGOG00000014590	GNL1	100	63.226	Gorilla_gorilla
ENSXETG00000024087	gnl1	95	56.799	ENSHBUG00000016745	gnl1	99	53.429	Haplochromis_burtoni
ENSXETG00000024087	gnl1	100	61.389	ENSHGLG00000017193	GNL1	100	60.582	Heterocephalus_glaber_female
ENSXETG00000024087	gnl1	87	59.665	ENSHGLG00100009994	GNL1	100	57.358	Heterocephalus_glaber_male
ENSXETG00000024087	gnl1	100	53.968	ENSHCOG00000012493	gnl1	88	56.781	Hippocampus_comes
ENSXETG00000024087	gnl1	100	53.130	ENSIPUG00000004850	gnl1	99	52.320	Ictalurus_punctatus
ENSXETG00000024087	gnl1	100	63.533	ENSSTOG00000011822	GNL1	100	62.561	Ictidomys_tridecemlineatus
ENSXETG00000024087	gnl1	100	63.269	ENSJJAG00000010831	-	100	61.601	Jaculus_jaculus
ENSXETG00000024087	gnl1	91	57.321	ENSKMAG00000009059	gnl1	90	56.614	Kryptolebias_marmoratus
ENSXETG00000024087	gnl1	100	54.213	ENSLBEG00000011038	gnl1	99	52.707	Labrus_bergylta
ENSXETG00000024087	gnl1	100	66.882	ENSLACG00000001713	GNL1	100	64.821	Latimeria_chalumnae
ENSXETG00000024087	gnl1	100	61.465	ENSLAFG00000030406	GNL1	100	62.097	Loxodonta_africana
ENSXETG00000024087	gnl1	100	64.078	ENSMFAG00000001167	GNL1	100	63.226	Macaca_fascicularis
ENSXETG00000024087	gnl1	100	64.078	ENSMMUG00000020077	GNL1	100	63.226	Macaca_mulatta
ENSXETG00000024087	gnl1	100	64.078	ENSMNEG00000031618	GNL1	100	63.226	Macaca_nemestrina
ENSXETG00000024087	gnl1	100	64.078	ENSMLEG00000030252	GNL1	100	63.226	Mandrillus_leucophaeus
ENSXETG00000024087	gnl1	100	56.101	ENSMAMG00000003554	gnl1	88	59.494	Mastacembelus_armatus
ENSXETG00000024087	gnl1	95	56.799	ENSMZEG00005018216	gnl1	99	53.429	Maylandia_zebra
ENSXETG00000024087	gnl1	100	63.226	ENSMAUG00000015596	Gnl1	100	62.197	Mesocricetus_auratus
ENSXETG00000024087	gnl1	100	63.430	ENSMICG00000014708	GNL1	100	62.561	Microcebus_murinus
ENSXETG00000024087	gnl1	100	63.695	ENSMOCG00000020934	Gnl1	100	62.581	Microtus_ochrogaster
ENSXETG00000024087	gnl1	95	55.690	ENSMMOG00000015833	gnl1	89	56.661	Mola_mola
ENSXETG00000024087	gnl1	100	63.592	ENSMODG00000015964	GNL1	95	63.054	Monodelphis_domestica
ENSXETG00000024087	gnl1	100	55.485	ENSMALG00000022523	gnl1	99	53.748	Monopterus_albus
ENSXETG00000024087	gnl1	100	61.327	MGP_CAROLIEiJ_G0021547	Gnl1	100	61.290	Mus_caroli
ENSXETG00000024087	gnl1	100	63.430	ENSMUSG00000024429	Gnl1	100	62.258	Mus_musculus
ENSXETG00000024087	gnl1	100	63.592	MGP_PahariEiJ_G0020539	Gnl1	100	62.419	Mus_pahari
ENSXETG00000024087	gnl1	100	63.430	MGP_SPRETEiJ_G0022452	Gnl1	100	62.258	Mus_spretus
ENSXETG00000024087	gnl1	92	63.047	ENSMPUG00000011828	GNL1	78	62.203	Mustela_putorius_furo
ENSXETG00000024087	gnl1	93	62.738	ENSMLUG00000008722	GNL1	97	60.544	Myotis_lucifugus
ENSXETG00000024087	gnl1	100	63.754	ENSNGAG00000000745	Gnl1	100	62.802	Nannospalax_galili
ENSXETG00000024087	gnl1	100	54.936	ENSNBRG00000020813	gnl1	90	57.496	Neolamprologus_brichardi
ENSXETG00000024087	gnl1	92	62.703	ENSNLEG00000005058	GNL1	80	62.612	Nomascus_leucogenys
ENSXETG00000024087	gnl1	87	62.197	ENSOPRG00000000007	GNL1	100	59.510	Ochotona_princeps
ENSXETG00000024087	gnl1	100	62.621	ENSODEG00000018111	GNL1	100	61.489	Octodon_degus
ENSXETG00000024087	gnl1	95	56.799	ENSONIG00000013044	gnl1	99	53.429	Oreochromis_niloticus
ENSXETG00000024087	gnl1	100	62.885	ENSOCUG00000002110	GNL1	100	59.804	Oryctolagus_cuniculus
ENSXETG00000024087	gnl1	93	56.162	ENSORLG00000012862	gnl1	89	56.429	Oryzias_latipes
ENSXETG00000024087	gnl1	93	56.338	ENSORLG00020003923	gnl1	89	56.607	Oryzias_latipes_hni
ENSXETG00000024087	gnl1	93	56.162	ENSORLG00015009552	gnl1	89	56.429	Oryzias_latipes_hsok
ENSXETG00000024087	gnl1	100	54.386	ENSOMEG00000014409	gnl1	91	55.810	Oryzias_melastigma
ENSXETG00000024087	gnl1	95	62.585	ENSOGAG00000024106	-	92	64.338	Otolemur_garnettii
ENSXETG00000024087	gnl1	100	63.754	ENSOGAG00000004428	-	100	62.581	Otolemur_garnettii
ENSXETG00000024087	gnl1	100	62.880	ENSOARG00000012966	GNL1	100	61.699	Ovis_aries
ENSXETG00000024087	gnl1	100	63.857	ENSPPAG00000044009	GNL1	100	63.065	Pan_paniscus
ENSXETG00000024087	gnl1	100	64.239	ENSPPRG00000007039	GNL1	100	63.065	Panthera_pardus
ENSXETG00000024087	gnl1	100	64.078	ENSPTIG00000011307	GNL1	100	62.903	Panthera_tigris_altaica
ENSXETG00000024087	gnl1	92	65.642	ENSPTRG00000017928	GNL1	91	65.295	Pan_troglodytes
ENSXETG00000024087	gnl1	100	64.078	ENSPANG00000020097	GNL1	100	63.226	Papio_anubis
ENSXETG00000024087	gnl1	90	58.106	ENSPKIG00000002200	gnl1	99	52.733	Paramormyrops_kingsleyae
ENSXETG00000024087	gnl1	94	53.311	ENSPSIG00000008441	GNL1	100	51.510	Pelodiscus_sinensis
ENSXETG00000024087	gnl1	92	56.228	ENSPMGG00000007259	gnl1	90	56.228	Periophthalmus_magnuspinnatus
ENSXETG00000024087	gnl1	92	62.172	ENSPEMG00000002731	Gnl1	98	61.695	Peromyscus_maniculatus_bairdii
ENSXETG00000024087	gnl1	100	63.489	ENSPCIG00000014975	GNL1	100	63.489	Phascolarctos_cinereus
ENSXETG00000024087	gnl1	91	59.494	ENSPFOG00000015398	gnl1	88	59.206	Poecilia_formosa
ENSXETG00000024087	gnl1	91	59.494	ENSPLAG00000003231	gnl1	88	59.206	Poecilia_latipinna
ENSXETG00000024087	gnl1	91	59.494	ENSPMEG00000005001	gnl1	88	59.206	Poecilia_mexicana
ENSXETG00000024087	gnl1	91	59.206	ENSPREG00000012818	gnl1	88	59.206	Poecilia_reticulata
ENSXETG00000024087	gnl1	100	64.239	ENSPPYG00000016408	GNL1	100	63.065	Pongo_abelii
ENSXETG00000024087	gnl1	55	72.656	ENSPCAG00000004522	-	68	72.656	Procavia_capensis
ENSXETG00000024087	gnl1	100	64.078	ENSPCOG00000015669	GNL1	100	62.903	Propithecus_coquereli
ENSXETG00000024087	gnl1	100	63.754	ENSPVAG00000003970	GNL1	100	62.783	Pteropus_vampyrus
ENSXETG00000024087	gnl1	95	56.627	ENSPNYG00000022614	gnl1	99	53.270	Pundamilia_nyererei
ENSXETG00000024087	gnl1	91	56.752	ENSPNAG00000021257	gnl1	99	52.496	Pygocentrus_nattereri
ENSXETG00000024087	gnl1	100	63.209	ENSRNOG00000000798	Gnl1	100	62.500	Rattus_norvegicus
ENSXETG00000024087	gnl1	100	64.078	ENSRBIG00000019143	GNL1	100	63.226	Rhinopithecus_bieti
ENSXETG00000024087	gnl1	100	64.078	ENSRROG00000030029	GNL1	100	63.226	Rhinopithecus_roxellana
ENSXETG00000024087	gnl1	100	64.239	ENSSBOG00000031909	GNL1	100	63.065	Saimiri_boliviensis_boliviensis
ENSXETG00000024087	gnl1	100	62.158	ENSSHAG00000007557	GNL1	100	61.120	Sarcophilus_harrisii
ENSXETG00000024087	gnl1	90	60.256	ENSSFOG00015013921	gnl1	87	60.256	Scleropages_formosus
ENSXETG00000024087	gnl1	100	54.459	ENSSMAG00000010147	gnl1	88	58.000	Scophthalmus_maximus
ENSXETG00000024087	gnl1	95	55.938	ENSSDUG00000013824	gnl1	99	52.229	Seriola_dumerili
ENSXETG00000024087	gnl1	95	55.938	ENSSLDG00000024560	gnl1	99	52.229	Seriola_lalandi_dorsalis
ENSXETG00000024087	gnl1	56	67.327	ENSSARG00000006156	-	84	67.327	Sorex_araneus
ENSXETG00000024087	gnl1	100	65.217	ENSSPUG00000015374	GNL1	100	64.251	Sphenodon_punctatus
ENSXETG00000024087	gnl1	91	57.451	ENSSPAG00000017541	gnl1	99	52.464	Stegastes_partitus
ENSXETG00000024087	gnl1	100	64.078	ENSSSCG00000001372	GNL1	97	66.605	Sus_scrofa
ENSXETG00000024087	gnl1	93	54.867	ENSTRUG00000011226	gnl1	84	55.636	Takifugu_rubripes
ENSXETG00000024087	gnl1	93	54.930	ENSTNIG00000008017	gnl1	93	54.577	Tetraodon_nigroviridis
ENSXETG00000024087	gnl1	100	59.772	ENSTBEG00000007538	GNL1	100	58.604	Tupaia_belangeri
ENSXETG00000024087	gnl1	100	63.533	ENSTTRG00000008287	GNL1	100	61.211	Tursiops_truncatus
ENSXETG00000024087	gnl1	100	63.916	ENSUAMG00000007671	GNL1	100	63.047	Ursus_americanus
ENSXETG00000024087	gnl1	100	60.356	ENSUMAG00000018935	GNL1	100	65.033	Ursus_maritimus
ENSXETG00000024087	gnl1	100	63.754	ENSVVUG00000009537	GNL1	100	62.581	Vulpes_vulpes
ENSXETG00000024087	gnl1	90	59.307	ENSXCOG00000019185	gnl1	88	58.633	Xiphophorus_couchianus
ENSXETG00000024087	gnl1	90	59.124	ENSXMAG00000011015	gnl1	88	58.453	Xiphophorus_maculatus