EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Orthologs

Description

Ensembl ID: ENSXETG00000024114 (Gene tree)
Gene ID: -
Gene Symbol: gar1
Alias: -
Full Name: Xenopus tropicalis GAR1 homolog%2C ribonucleoprotein (gar1)%2C mRNA.
Gene Type: protein_coding
Species: Xenopus_tropicalis
Status: putative
Strand: Minus strand
Length: 7304 bases
Position: chrGL172725.1:731079-738382
Accession: NM_001011252
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSXETP00000052038	Gar1	PF04410.14	7.5e-41	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSXETT00000052038	-	1181	-	ENSXETP00000052038	219 (aa)	-	F7BYI9

Gene Model

Click here to download ENSXETG00000024114's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSXETG00000024114's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSXETG00000024114	gar1	67	74.830	ENSCAFG00020015566	GAR1	64	86.885	Canis_lupus_dingo
ENSXETG00000024114	gar1	61	75.373	ENSTSYG00000026632	-	54	81.132	Carlito_syrichta
ENSXETG00000024114	gar1	65	60.140	ENSCING00000005744	-	51	68.932	Ciona_intestinalis
ENSXETG00000024114	gar1	67	74.830	ENSECAG00000013624	GAR1	62	86.885	Equus_caballus
ENSXETG00000024114	gar1	51	85.714	ENSFHEG00000008068	gar1	50	87.736	Fundulus_heteroclitus
ENSXETG00000024114	gar1	51	85.714	ENSKMAG00000010402	gar1	50	88.679	Kryptolebias_marmoratus
ENSXETG00000024114	gar1	61	76.692	ENSPTIG00000021565	GAR1	56	86.885	Panthera_tigris_altaica
ENSXETG00000024114	gar1	52	71.681	ENSRBIG00000042411	-	51	72.642	Rhinopithecus_bieti
ENSXETG00000024114	gar1	52	71.681	ENSRROG00000044348	-	51	72.642	Rhinopithecus_roxellana
ENSXETG00000024114	gar1	59	78.295	ENSSPUG00000008707	GAR1	66	88.983	Sphenodon_punctatus
ENSXETG00000024114	gar1	52	85.841	ENSTGUG00000004185	GAR1	65	89.583	Taeniopygia_guttata
ENSXETG00000024114	gar1	67	74.830	ENSUAMG00000005652	GAR1	64	86.885	Ursus_americanus