EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Orthologs

Description

Ensembl ID: ENSXETG00000024143 (Gene tree)
Gene ID: -
Gene Symbol: aptx
Alias: -
Full Name: Xenopus tropicalis aprataxin (aptx)%2C mRNA.
Gene Type: protein_coding
Species: Xenopus_tropicalis
Status: putative
Strand: Minus strand
Length: 17331 bases
Position: chrGL172715.1:2463146-2480476
Accession: NM_205825
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSXETP00000052107	DcpS_C	PF11969.8	2.8e-33	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSXETT00000052107	-	1539	-	ENSXETP00000052107	347 (aa)	XP_012814173	P61801

Gene Model

Click here to download ENSXETG00000024143's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSXETG00000024143's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSXETG00000024143	aptx	99	62.000	ENSG00000137074	APTX	94	72.727	Homo_sapiens
ENSXETG00000024143	aptx	99	59.130	ENSAPOG00000008785	aptx	99	56.704	Acanthochromis_polyacanthus
ENSXETG00000024143	aptx	99	59.829	ENSAMEG00000007648	APTX	96	59.714	Ailuropoda_melanoleuca
ENSXETG00000024143	aptx	99	55.747	ENSACIG00000002035	aptx	99	54.701	Amphilophus_citrinellus
ENSXETG00000024143	aptx	99	59.654	ENSAOCG00000000634	aptx	99	57.263	Amphiprion_ocellaris
ENSXETG00000024143	aptx	99	59.654	ENSAPEG00000017253	aptx	99	57.263	Amphiprion_percula
ENSXETG00000024143	aptx	99	58.857	ENSATEG00000017383	aptx	99	57.803	Anabas_testudineus
ENSXETG00000024143	aptx	90	52.812	ENSAPLG00000015645	APTX	99	52.665	Anas_platyrhynchos
ENSXETG00000024143	aptx	99	56.497	ENSACAG00000003581	APTX	95	56.497	Anolis_carolinensis
ENSXETG00000024143	aptx	99	60.519	ENSANAG00000030160	APTX	96	60.606	Aotus_nancymaae
ENSXETG00000024143	aptx	99	60.231	ENSACLG00000018887	aptx	100	58.790	Astatotilapia_calliptera
ENSXETG00000024143	aptx	99	55.814	ENSAMXG00000039899	aptx	99	55.398	Astyanax_mexicanus
ENSXETG00000024143	aptx	99	59.078	ENSBTAG00000013947	APTX	98	59.885	Bos_taurus
ENSXETG00000024143	aptx	99	61.714	ENSCJAG00000007940	APTX	99	61.364	Callithrix_jacchus
ENSXETG00000024143	aptx	99	58.857	ENSCAFG00000001812	APTX	99	58.857	Canis_familiaris
ENSXETG00000024143	aptx	99	58.857	ENSCAFG00020015598	APTX	99	58.857	Canis_lupus_dingo
ENSXETG00000024143	aptx	99	59.710	ENSCHIG00000012896	APTX	99	58.857	Capra_hircus
ENSXETG00000024143	aptx	99	59.885	ENSTSYG00000003041	APTX	93	69.274	Carlito_syrichta
ENSXETG00000024143	aptx	59	70.455	ENSCAPG00000013470	APTX	99	70.455	Cavia_aperea
ENSXETG00000024143	aptx	99	60.571	ENSCPOG00000005975	APTX	99	67.895	Cavia_porcellus
ENSXETG00000024143	aptx	99	60.632	ENSCCAG00000036783	APTX	99	60.227	Cebus_capucinus
ENSXETG00000024143	aptx	99	61.429	ENSCATG00000042639	APTX	96	61.429	Cercocebus_atys
ENSXETG00000024143	aptx	99	61.032	ENSCLAG00000012185	APTX	99	68.715	Chinchilla_lanigera
ENSXETG00000024143	aptx	99	61.143	ENSCSAG00000009885	APTX	95	61.143	Chlorocebus_sabaeus
ENSXETG00000024143	aptx	99	60.969	ENSCPBG00000023973	APTX	98	60.114	Chrysemys_picta_bellii
ENSXETG00000024143	aptx	98	41.436	ENSCING00000008741	-	95	39.835	Ciona_intestinalis
ENSXETG00000024143	aptx	99	43.562	ENSCSAVG00000008038	-	98	43.132	Ciona_savignyi
ENSXETG00000024143	aptx	99	61.143	ENSCANG00000037253	APTX	99	61.143	Colobus_angolensis_palliatus
ENSXETG00000024143	aptx	99	59.357	ENSCGRG00001000705	Aptx	98	69.274	Cricetulus_griseus_chok1gshd
ENSXETG00000024143	aptx	99	58.671	ENSCGRG00000014159	Aptx	98	69.274	Cricetulus_griseus_crigri
ENSXETG00000024143	aptx	99	57.514	ENSCSEG00000009549	aptx	99	57.803	Cynoglossus_semilaevis
ENSXETG00000024143	aptx	99	58.286	ENSCVAG00000011942	aptx	99	58.000	Cyprinodon_variegatus
ENSXETG00000024143	aptx	100	56.196	ENSDARG00000027143	aptx	100	55.460	Danio_rerio
ENSXETG00000024143	aptx	99	62.717	ENSDNOG00000018498	APTX	96	62.717	Dasypus_novemcinctus
ENSXETG00000024143	aptx	99	59.026	ENSDORG00000002139	Aptx	98	72.881	Dipodomys_ordii
ENSXETG00000024143	aptx	52	37.714	FBgn0038704	CG5316	87	41.803	Drosophila_melanogaster
ENSXETG00000024143	aptx	82	55.439	ENSETEG00000012459	APTX	79	56.055	Echinops_telfairi
ENSXETG00000024143	aptx	98	44.828	ENSEBUG00000013914	aptx	95	44.857	Eptatretus_burgeri
ENSXETG00000024143	aptx	99	59.599	ENSEASG00005004566	APTX	99	58.621	Equus_asinus_asinus
ENSXETG00000024143	aptx	99	59.885	ENSECAG00000012674	APTX	92	58.543	Equus_caballus
ENSXETG00000024143	aptx	85	57.807	ENSEEUG00000010693	APTX	95	57.432	Erinaceus_europaeus
ENSXETG00000024143	aptx	99	60.684	ENSFCAG00000008728	APTX	99	60.684	Felis_catus
ENSXETG00000024143	aptx	99	58.405	ENSFALG00000001230	APTX	99	57.759	Ficedula_albicollis
ENSXETG00000024143	aptx	99	58.261	ENSFDAG00000013752	APTX	98	72.881	Fukomys_damarensis
ENSXETG00000024143	aptx	83	55.631	ENSFHEG00000021328	aptx	73	55.631	Fundulus_heteroclitus
ENSXETG00000024143	aptx	99	59.130	ENSGMOG00000012505	aptx	99	58.261	Gadus_morhua
ENSXETG00000024143	aptx	99	54.728	ENSGALG00000001954	APTX	99	54.598	Gallus_gallus
ENSXETG00000024143	aptx	99	58.092	ENSGAFG00000005086	aptx	99	58.092	Gambusia_affinis
ENSXETG00000024143	aptx	99	58.621	ENSGACG00000017887	aptx	99	58.046	Gasterosteus_aculeatus
ENSXETG00000024143	aptx	99	61.190	ENSGAGG00000013230	APTX	99	60.623	Gopherus_agassizii
ENSXETG00000024143	aptx	86	61.921	ENSGGOG00000014232	APTX	95	57.143	Gorilla_gorilla
ENSXETG00000024143	aptx	99	59.942	ENSHBUG00000021058	aptx	100	58.501	Haplochromis_burtoni
ENSXETG00000024143	aptx	99	59.710	ENSHGLG00000015093	APTX	99	74.576	Heterocephalus_glaber_female
ENSXETG00000024143	aptx	99	59.714	ENSHGLG00100013482	APTX	99	74.576	Heterocephalus_glaber_male
ENSXETG00000024143	aptx	99	56.812	ENSHCOG00000018216	aptx	96	55.942	Hippocampus_comes
ENSXETG00000024143	aptx	99	56.977	ENSIPUG00000017548	aptx	99	56.977	Ictalurus_punctatus
ENSXETG00000024143	aptx	99	59.420	ENSSTOG00000005185	APTX	99	74.576	Ictidomys_tridecemlineatus
ENSXETG00000024143	aptx	99	56.160	ENSJJAG00000015653	Aptx	99	53.602	Jaculus_jaculus
ENSXETG00000024143	aptx	99	56.484	ENSKMAG00000000117	aptx	99	57.637	Kryptolebias_marmoratus
ENSXETG00000024143	aptx	99	56.647	ENSLBEG00000015353	aptx	99	57.143	Labrus_bergylta
ENSXETG00000024143	aptx	99	49.709	ENSLBEG00000021489	APTX	99	49.448	Labrus_bergylta
ENSXETG00000024143	aptx	99	58.659	ENSLACG00000003376	APTX	99	58.757	Latimeria_chalumnae
ENSXETG00000024143	aptx	99	59.829	ENSLOCG00000011556	aptx	96	59.829	Lepisosteus_oculatus
ENSXETG00000024143	aptx	99	61.538	ENSLAFG00000005665	APTX	99	61.932	Loxodonta_africana
ENSXETG00000024143	aptx	99	61.143	ENSMFAG00000043141	APTX	96	61.143	Macaca_fascicularis
ENSXETG00000024143	aptx	99	61.143	ENSMMUG00000007724	APTX	96	61.143	Macaca_mulatta
ENSXETG00000024143	aptx	99	60.857	ENSMNEG00000042341	APTX	99	60.857	Macaca_nemestrina
ENSXETG00000024143	aptx	99	61.429	ENSMLEG00000035137	APTX	99	61.429	Mandrillus_leucophaeus
ENSXETG00000024143	aptx	99	59.710	ENSMAMG00000018377	aptx	99	59.130	Mastacembelus_armatus
ENSXETG00000024143	aptx	98	60.933	ENSMZEG00005022621	aptx	99	58.892	Maylandia_zebra
ENSXETG00000024143	aptx	51	67.045	ENSMGAG00000005736	APTX	97	67.045	Meleagris_gallopavo
ENSXETG00000024143	aptx	99	60.234	ENSMAUG00000006039	Aptx	98	75.000	Mesocricetus_auratus
ENSXETG00000024143	aptx	99	60.000	ENSMICG00000006603	APTX	97	60.000	Microcebus_murinus
ENSXETG00000024143	aptx	99	59.710	ENSMOCG00000000869	Aptx	99	69.274	Microtus_ochrogaster
ENSXETG00000024143	aptx	99	60.290	ENSMMOG00000007028	aptx	100	59.078	Mola_mola
ENSXETG00000024143	aptx	98	56.686	ENSMODG00000003365	APTX	98	56.000	Monodelphis_domestica
ENSXETG00000024143	aptx	99	53.161	ENSMALG00000003828	aptx	68	87.500	Monopterus_albus
ENSXETG00000024143	aptx	70	72.881	MGP_CAROLIEiJ_G0025897	-	99	72.881	Mus_caroli
ENSXETG00000024143	aptx	99	60.580	ENSMUSG00000028411	Aptx	99	72.881	Mus_musculus
ENSXETG00000024143	aptx	99	60.870	MGP_PahariEiJ_G0024020	Aptx	99	60.870	Mus_pahari
ENSXETG00000024143	aptx	99	60.580	MGP_SPRETEiJ_G0026846	Aptx	97	60.580	Mus_spretus
ENSXETG00000024143	aptx	99	58.621	ENSMPUG00000004290	APTX	99	59.429	Mustela_putorius_furo
ENSXETG00000024143	aptx	99	59.829	ENSMLUG00000016081	APTX	94	60.286	Myotis_lucifugus
ENSXETG00000024143	aptx	99	59.312	ENSNGAG00000016314	Aptx	99	68.156	Nannospalax_galili
ENSXETG00000024143	aptx	99	60.231	ENSNBRG00000014199	aptx	100	58.790	Neolamprologus_brichardi
ENSXETG00000024143	aptx	99	61.429	ENSNLEG00000032184	APTX	99	61.429	Nomascus_leucogenys
ENSXETG00000024143	aptx	99	57.184	ENSMEUG00000004153	APTX	99	56.647	Notamacropus_eugenii
ENSXETG00000024143	aptx	85	58.140	ENSOPRG00000012403	APTX	95	58.140	Ochotona_princeps
ENSXETG00000024143	aptx	99	59.714	ENSODEG00000015832	-	99	74.576	Octodon_degus
ENSXETG00000024143	aptx	73	66.327	ENSODEG00000000097	-	99	51.884	Octodon_degus
ENSXETG00000024143	aptx	99	60.519	ENSONIG00000014541	aptx	83	58.501	Oreochromis_niloticus
ENSXETG00000024143	aptx	86	55.556	ENSOANG00000009878	APTX	98	55.229	Ornithorhynchus_anatinus
ENSXETG00000024143	aptx	76	71.186	ENSOCUG00000025059	-	91	71.591	Oryctolagus_cuniculus
ENSXETG00000024143	aptx	99	60.000	ENSOCUG00000000738	-	99	59.934	Oryctolagus_cuniculus
ENSXETG00000024143	aptx	99	56.857	ENSORLG00000006237	aptx	99	55.523	Oryzias_latipes
ENSXETG00000024143	aptx	99	56.571	ENSORLG00020021478	aptx	99	55.233	Oryzias_latipes_hni
ENSXETG00000024143	aptx	99	56.522	ENSORLG00015021873	aptx	99	55.652	Oryzias_latipes_hsok
ENSXETG00000024143	aptx	87	53.571	ENSOMEG00000007875	aptx	80	53.974	Oryzias_melastigma
ENSXETG00000024143	aptx	99	59.599	ENSOGAG00000005388	APTX	95	59.429	Otolemur_garnettii
ENSXETG00000024143	aptx	99	59.429	ENSOARG00000009598	APTX	95	59.429	Ovis_aries
ENSXETG00000024143	aptx	99	62.286	ENSPPAG00000030295	APTX	96	62.286	Pan_paniscus
ENSXETG00000024143	aptx	99	60.684	ENSPPRG00000017524	APTX	99	60.684	Panthera_pardus
ENSXETG00000024143	aptx	99	60.684	ENSPTIG00000020000	APTX	99	60.684	Panthera_tigris_altaica
ENSXETG00000024143	aptx	99	62.286	ENSPTRG00000020850	APTX	99	62.286	Pan_troglodytes
ENSXETG00000024143	aptx	99	61.143	ENSPANG00000025301	APTX	96	61.143	Papio_anubis
ENSXETG00000024143	aptx	99	58.453	ENSPKIG00000013601	aptx	99	58.453	Paramormyrops_kingsleyae
ENSXETG00000024143	aptx	99	59.827	ENSPSIG00000010521	APTX	95	59.827	Pelodiscus_sinensis
ENSXETG00000024143	aptx	98	53.936	ENSPMGG00000018649	aptx	99	52.786	Periophthalmus_magnuspinnatus
ENSXETG00000024143	aptx	99	59.710	ENSPEMG00000007747	Aptx	99	68.715	Peromyscus_maniculatus_bairdii
ENSXETG00000024143	aptx	99	45.977	ENSPMAG00000008417	aptx	97	45.690	Petromyzon_marinus
ENSXETG00000024143	aptx	99	59.599	ENSPCIG00000029852	APTX	99	59.599	Phascolarctos_cinereus
ENSXETG00000024143	aptx	99	58.671	ENSPFOG00000004992	aptx	99	58.671	Poecilia_formosa
ENSXETG00000024143	aptx	99	58.671	ENSPFOG00000005131	-	99	58.671	Poecilia_formosa
ENSXETG00000024143	aptx	99	58.671	ENSPLAG00000007960	APTX	99	58.671	Poecilia_latipinna
ENSXETG00000024143	aptx	99	58.671	ENSPLAG00000007906	aptx	99	58.671	Poecilia_latipinna
ENSXETG00000024143	aptx	99	58.671	ENSPMEG00000019789	APTX	99	58.671	Poecilia_mexicana
ENSXETG00000024143	aptx	99	58.671	ENSPMEG00000018504	aptx	99	58.671	Poecilia_mexicana
ENSXETG00000024143	aptx	99	52.890	ENSPREG00000004375	aptx	99	52.312	Poecilia_reticulata
ENSXETG00000024143	aptx	99	61.429	ENSPPYG00000019142	APTX	95	61.429	Pongo_abelii
ENSXETG00000024143	aptx	99	49.858	ENSPCAG00000010014	APTX	99	49.858	Procavia_capensis
ENSXETG00000024143	aptx	99	60.571	ENSPCOG00000016780	APTX	99	60.571	Propithecus_coquereli
ENSXETG00000024143	aptx	99	59.490	ENSPVAG00000011468	APTX	95	59.366	Pteropus_vampyrus
ENSXETG00000024143	aptx	99	60.231	ENSPNYG00000007675	aptx	100	58.790	Pundamilia_nyererei
ENSXETG00000024143	aptx	99	55.874	ENSPNAG00000015984	aptx	99	55.874	Pygocentrus_nattereri
ENSXETG00000024143	aptx	99	59.420	ENSRNOG00000006582	Aptx	99	58.841	Rattus_norvegicus
ENSXETG00000024143	aptx	99	61.143	ENSRBIG00000042913	APTX	99	61.143	Rhinopithecus_bieti
ENSXETG00000024143	aptx	99	61.143	ENSRROG00000035395	APTX	99	61.143	Rhinopithecus_roxellana
ENSXETG00000024143	aptx	99	60.920	ENSSBOG00000025215	APTX	99	60.511	Saimiri_boliviensis_boliviensis
ENSXETG00000024143	aptx	99	59.155	ENSSHAG00000012205	APTX	94	58.873	Sarcophilus_harrisii
ENSXETG00000024143	aptx	99	59.026	ENSSFOG00015009267	aptx	99	59.026	Scleropages_formosus
ENSXETG00000024143	aptx	99	58.382	ENSSMAG00000008839	aptx	99	58.671	Scophthalmus_maximus
ENSXETG00000024143	aptx	99	59.710	ENSSDUG00000001989	aptx	99	58.841	Seriola_dumerili
ENSXETG00000024143	aptx	99	59.130	ENSSLDG00000004915	aptx	99	57.971	Seriola_lalandi_dorsalis
ENSXETG00000024143	aptx	99	62.606	ENSSPUG00000008994	APTX	86	61.364	Sphenodon_punctatus
ENSXETG00000024143	aptx	99	58.841	ENSSPAG00000020373	aptx	99	56.145	Stegastes_partitus
ENSXETG00000024143	aptx	99	60.920	ENSSSCG00000011001	APTX	99	60.920	Sus_scrofa
ENSXETG00000024143	aptx	99	58.101	ENSTGUG00000001441	APTX	99	57.103	Taeniopygia_guttata
ENSXETG00000024143	aptx	100	57.637	ENSTRUG00000009794	aptx	100	56.000	Takifugu_rubripes
ENSXETG00000024143	aptx	100	57.637	ENSTNIG00000010570	aptx	99	57.637	Tetraodon_nigroviridis
ENSXETG00000024143	aptx	99	55.652	ENSTBEG00000008504	APTX	95	55.714	Tupaia_belangeri
ENSXETG00000024143	aptx	93	55.215	ENSTTRG00000007384	APTX	95	55.828	Tursiops_truncatus
ENSXETG00000024143	aptx	99	59.429	ENSUAMG00000003700	APTX	97	59.714	Ursus_americanus
ENSXETG00000024143	aptx	99	59.429	ENSUMAG00000005837	APTX	99	59.714	Ursus_maritimus
ENSXETG00000024143	aptx	72	67.442	ENSVPAG00000001297	APTX	68	67.442	Vicugna_pacos
ENSXETG00000024143	aptx	99	58.857	ENSVVUG00000021130	APTX	99	58.857	Vulpes_vulpes
ENSXETG00000024143	aptx	99	56.780	ENSXCOG00000005020	aptx	99	55.807	Xiphophorus_couchianus
ENSXETG00000024143	aptx	99	58.382	ENSXMAG00000022086	aptx	96	58.382	Xiphophorus_maculatus