EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Orthologs

Description

Ensembl ID: ENSXETG00000024395 (Gene tree)
Gene ID: -
Gene Symbol: casc3
Alias: -
Full Name: Xenopus tropicalis CASC3%2C exon junction complex subunit (casc3)%2C mRNA.
Gene Type: protein_coding
Species: Xenopus_tropicalis
Status: putative
Strand: Minus strand
Length: 18780 bases
Position: chrGL173218.1:355400-374179
Accession: NM_001012652
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSXETP00000052759	Btz	PF09405.10	2.6e-22	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSXETT00000052759	-	2667	-	ENSXETP00000052759	678 (aa)	-	F6X519

Gene Model

Click here to download ENSXETG00000024395's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSXETG00000024395's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSXETG00000024395	casc3	98	56.662	ENSG00000108349	CASC3	84	64.894	Homo_sapiens
ENSXETG00000024395	casc3	98	58.065	ENSAMEG00000007764	CASC3	89	60.535	Ailuropoda_melanoleuca
ENSXETG00000024395	casc3	99	44.684	ENSACIG00000000720	casc3	84	47.943	Amphilophus_citrinellus
ENSXETG00000024395	casc3	88	49.511	ENSAOCG00000016676	casc3	71	52.030	Amphiprion_ocellaris
ENSXETG00000024395	casc3	88	49.511	ENSAPEG00000006787	casc3	71	53.184	Amphiprion_percula
ENSXETG00000024395	casc3	88	48.562	ENSATEG00000017196	casc3	78	48.802	Anabas_testudineus
ENSXETG00000024395	casc3	90	59.591	ENSACAG00000002674	CASC3	86	60.348	Anolis_carolinensis
ENSXETG00000024395	casc3	54	73.786	ENSANAG00000031954	-	83	73.786	Aotus_nancymaae
ENSXETG00000024395	casc3	96	53.481	ENSANAG00000034820	-	90	53.943	Aotus_nancymaae
ENSXETG00000024395	casc3	98	58.996	ENSBTAG00000006250	CASC3	89	61.321	Bos_taurus
ENSXETG00000024395	casc3	98	55.726	ENSCJAG00000016032	CASC3	89	58.009	Callithrix_jacchus
ENSXETG00000024395	casc3	98	58.263	ENSCAFG00000016141	CASC3	89	61.321	Canis_familiaris
ENSXETG00000024395	casc3	98	57.483	ENSCAFG00020018882	CASC3	89	60.283	Canis_lupus_dingo
ENSXETG00000024395	casc3	98	58.577	ENSCHIG00000006338	CASC3	89	60.692	Capra_hircus
ENSXETG00000024395	casc3	89	58.703	ENSTSYG00000002975	CASC3	88	61.306	Carlito_syrichta
ENSXETG00000024395	casc3	88	59.289	ENSCAPG00000010514	CASC3	95	58.249	Cavia_aperea
ENSXETG00000024395	casc3	98	57.123	ENSCPOG00000015139	CASC3	90	59.119	Cavia_porcellus
ENSXETG00000024395	casc3	90	58.556	ENSCCAG00000033620	CASC3	89	59.306	Cebus_capucinus
ENSXETG00000024395	casc3	98	57.283	ENSCATG00000033593	CASC3	89	60.377	Cercocebus_atys
ENSXETG00000024395	casc3	98	56.224	ENSCLAG00000013730	CASC3	89	59.055	Chinchilla_lanigera
ENSXETG00000024395	casc3	98	57.283	ENSCSAG00000002777	CASC3	89	60.377	Chlorocebus_sabaeus
ENSXETG00000024395	casc3	98	58.626	ENSCPBG00000004750	CASC3	97	60.896	Chrysemys_picta_bellii
ENSXETG00000024395	casc3	98	56.443	ENSCANG00000008814	CASC3	89	60.220	Colobus_angolensis_palliatus
ENSXETG00000024395	casc3	90	59.528	ENSCGRG00001014706	Casc3	89	60.787	Cricetulus_griseus_chok1gshd
ENSXETG00000024395	casc3	98	57.558	ENSCGRG00000001952	Casc3	95	60.766	Cricetulus_griseus_crigri
ENSXETG00000024395	casc3	79	52.113	ENSCSEG00000010047	casc3	70	46.602	Cynoglossus_semilaevis
ENSXETG00000024395	casc3	81	54.317	ENSDARG00000029911	casc3	71	54.902	Danio_rerio
ENSXETG00000024395	casc3	98	58.462	ENSDNOG00000017249	CASC3	86	61.321	Dasypus_novemcinctus
ENSXETG00000024395	casc3	98	55.712	ENSETEG00000013720	CASC3	89	56.942	Echinops_telfairi
ENSXETG00000024395	casc3	98	56.966	ENSEASG00005002909	CASC3	89	58.978	Equus_asinus_asinus
ENSXETG00000024395	casc3	98	57.815	ENSECAG00000019947	CASC3	78	60.093	Equus_caballus
ENSXETG00000024395	casc3	71	51.233	ENSEEUG00000014253	CASC3	86	51.515	Erinaceus_europaeus
ENSXETG00000024395	casc3	98	57.322	ENSFCAG00000014998	CASC3	89	58.805	Felis_catus
ENSXETG00000024395	casc3	91	57.991	ENSFALG00000000412	CASC3	100	59.604	Ficedula_albicollis
ENSXETG00000024395	casc3	94	54.751	ENSFDAG00000020696	CASC3	96	56.132	Fukomys_damarensis
ENSXETG00000024395	casc3	92	61.994	ENSGALG00000031813	CASC3	96	62.364	Gallus_gallus
ENSXETG00000024395	casc3	89	59.341	ENSGAGG00000008432	CASC3	95	59.813	Gopherus_agassizii
ENSXETG00000024395	casc3	98	57.183	ENSGGOG00000005067	CASC3	89	59.213	Gorilla_gorilla
ENSXETG00000024395	casc3	98	55.634	ENSHGLG00000012117	CASC3	89	58.583	Heterocephalus_glaber_female
ENSXETG00000024395	casc3	89	59.113	ENSHGLG00100002268	CASC3	99	58.533	Heterocephalus_glaber_male
ENSXETG00000024395	casc3	98	58.298	ENSSTOG00000006374	CASC3	89	61.006	Ictidomys_tridecemlineatus
ENSXETG00000024395	casc3	98	57.483	ENSJJAG00000023525	Casc3	88	59.468	Jaculus_jaculus
ENSXETG00000024395	casc3	98	54.294	ENSLACG00000013200	CASC3	88	54.969	Latimeria_chalumnae
ENSXETG00000024395	casc3	84	58.462	ENSLOCG00000013518	casc3	64	64.352	Lepisosteus_oculatus
ENSXETG00000024395	casc3	98	57.947	ENSLAFG00000000606	CASC3	89	60.759	Loxodonta_africana
ENSXETG00000024395	casc3	98	57.283	ENSMFAG00000041496	CASC3	89	60.377	Macaca_fascicularis
ENSXETG00000024395	casc3	98	57.283	ENSMMUG00000045187	CASC3	89	60.377	Macaca_mulatta
ENSXETG00000024395	casc3	89	60.254	ENSMLEG00000029049	CASC3	98	60.510	Mandrillus_leucophaeus
ENSXETG00000024395	casc3	87	61.275	ENSMGAG00000013247	CASC3	99	62.237	Meleagris_gallopavo
ENSXETG00000024395	casc3	72	58.498	ENSMAUG00000006023	Casc3	79	57.341	Mesocricetus_auratus
ENSXETG00000024395	casc3	98	58.543	ENSMICG00000003321	CASC3	89	62.025	Microcebus_murinus
ENSXETG00000024395	casc3	90	61.792	ENSMOCG00000013644	Casc3	89	60.410	Microtus_ochrogaster
ENSXETG00000024395	casc3	98	57.550	ENSMODG00000013044	CASC3	82	60.348	Monodelphis_domestica
ENSXETG00000024395	casc3	89	61.760	MGP_CAROLIEiJ_G0017099	Casc3	89	61.356	Mus_caroli
ENSXETG00000024395	casc3	89	60.960	ENSMUSG00000078676	Casc3	89	60.568	Mus_musculus
ENSXETG00000024395	casc3	89	61.280	MGP_SPRETEiJ_G0017943	Casc3	89	60.883	Mus_spretus
ENSXETG00000024395	casc3	98	58.485	ENSMPUG00000014903	CASC3	89	61.417	Mustela_putorius_furo
ENSXETG00000024395	casc3	98	57.741	ENSMLUG00000010520	CASC3	89	59.875	Myotis_lucifugus
ENSXETG00000024395	casc3	98	56.879	ENSNGAG00000023121	Casc3	89	60.157	Nannospalax_galili
ENSXETG00000024395	casc3	98	57.725	ENSNLEG00000001598	CASC3	89	60.410	Nomascus_leucogenys
ENSXETG00000024395	casc3	62	53.778	ENSOPRG00000007240	-	65	56.152	Ochotona_princeps
ENSXETG00000024395	casc3	98	55.525	ENSODEG00000017858	CASC3	89	59.812	Octodon_degus
ENSXETG00000024395	casc3	80	40.204	ENSOANG00000003499	-	96	40.870	Ornithorhynchus_anatinus
ENSXETG00000024395	casc3	98	59.155	ENSOCUG00000002954	CASC3	89	61.709	Oryctolagus_cuniculus
ENSXETG00000024395	casc3	100	56.445	ENSOGAG00000034486	CASC3	90	59.939	Otolemur_garnettii
ENSXETG00000024395	casc3	98	59.135	ENSOARG00000013239	CASC3	89	61.478	Ovis_aries
ENSXETG00000024395	casc3	98	56.662	ENSPPAG00000035069	CASC3	89	59.213	Pan_paniscus
ENSXETG00000024395	casc3	98	57.322	ENSPPRG00000023670	CASC3	89	58.805	Panthera_pardus
ENSXETG00000024395	casc3	89	60.095	ENSPTIG00000010891	CASC3	89	58.805	Panthera_tigris_altaica
ENSXETG00000024395	casc3	98	56.346	ENSPANG00000021708	CASC3	89	60.535	Papio_anubis
ENSXETG00000024395	casc3	99	46.154	ENSPKIG00000023186	casc3	93	45.055	Paramormyrops_kingsleyae
ENSXETG00000024395	casc3	98	57.444	ENSPEMG00000009774	Casc3	89	59.937	Peromyscus_maniculatus_bairdii
ENSXETG00000024395	casc3	98	58.133	ENSPCIG00000025678	CASC3	90	61.599	Phascolarctos_cinereus
ENSXETG00000024395	casc3	90	46.032	ENSPFOG00000017632	casc3	91	45.242	Poecilia_formosa
ENSXETG00000024395	casc3	65	42.675	ENSPMEG00000010299	casc3	75	42.733	Poecilia_mexicana
ENSXETG00000024395	casc3	79	46.435	ENSPREG00000011856	casc3	81	45.307	Poecilia_reticulata
ENSXETG00000024395	casc3	98	57.525	ENSPPYG00000008467	CASC3	89	60.348	Pongo_abelii
ENSXETG00000024395	casc3	98	58.056	ENSPCOG00000008183	CASC3	89	61.406	Propithecus_coquereli
ENSXETG00000024395	casc3	98	57.083	ENSPVAG00000008556	CASC3	89	59.906	Pteropus_vampyrus
ENSXETG00000024395	casc3	98	47.781	ENSPNAG00000015928	casc3	99	46.809	Pygocentrus_nattereri
ENSXETG00000024395	casc3	89	58.862	ENSRNOG00000009716	Casc3	88	57.692	Rattus_norvegicus
ENSXETG00000024395	casc3	98	56.723	ENSRBIG00000033289	CASC3	89	58.962	Rhinopithecus_bieti
ENSXETG00000024395	casc3	98	56.723	ENSRROG00000022337	CASC3	89	60.377	Rhinopithecus_roxellana
ENSXETG00000024395	casc3	88	59.551	ENSSBOG00000031406	CASC3	93	58.754	Saimiri_boliviensis_boliviensis
ENSXETG00000024395	casc3	89	61.844	ENSSHAG00000013338	CASC3	99	60.127	Sarcophilus_harrisii
ENSXETG00000024395	casc3	64	70.677	ENSSMAG00000016096	casc3	50	78.261	Scophthalmus_maximus
ENSXETG00000024395	casc3	75	65.909	ENSSARG00000010378	CASC3	86	65.909	Sorex_araneus
ENSXETG00000024395	casc3	89	61.173	ENSSSCG00000017477	CASC3	98	60.191	Sus_scrofa
ENSXETG00000024395	casc3	75	59.429	ENSTGUG00000002300	CASC3	99	59.810	Taeniopygia_guttata
ENSXETG00000024395	casc3	90	45.356	ENSTNIG00000003208	casc3	90	45.227	Tetraodon_nigroviridis
ENSXETG00000024395	casc3	64	79.024	ENSTBEG00000017459	CASC3	55	79.024	Tupaia_belangeri
ENSXETG00000024395	casc3	77	63.725	ENSTTRG00000016896	CASC3	87	65.934	Tursiops_truncatus
ENSXETG00000024395	casc3	98	57.003	ENSUAMG00000015116	CASC3	89	59.184	Ursus_americanus
ENSXETG00000024395	casc3	89	60.191	ENSUMAG00000017697	CASC3	98	59.713	Ursus_maritimus
ENSXETG00000024395	casc3	62	76.106	ENSVPAG00000000799	CASC3	60	76.106	Vicugna_pacos
ENSXETG00000024395	casc3	98	58.123	ENSVVUG00000000997	CASC3	89	60.377	Vulpes_vulpes