EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Orthologs

Description

Ensembl ID: ENSXETG00000024439 (Gene tree)
Gene ID: -
Gene Symbol: rnps1
Alias: -
Full Name: RNA binding protein S1%2C serine-rich domain
Gene Type: protein_coding
Species: Xenopus_tropicalis
Status: putative
Strand: Minus strand
Length: 6513 bases
Position: chrGL172663.1:678175-684687
Accession: XB-GENE-941526
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSXETP00000052845	RRM_1	PF00076.22	2.8e-18	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSXETT00000052845	-	1462	-	ENSXETP00000052845	309 (aa)	-	Q28E41

Gene Model

Click here to download ENSXETG00000024439's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSXETG00000024439's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSXETG00000024439	rnps1	73	72.124	ENSG00000205937	RNPS1	92	64.744	Homo_sapiens
ENSXETG00000024439	rnps1	69	71.495	ENSAPOG00000017310	RNPS1	74	63.248	Acanthochromis_polyacanthus
ENSXETG00000024439	rnps1	73	72.124	ENSAMEG00000017861	RNPS1	78	69.874	Ailuropoda_melanoleuca
ENSXETG00000024439	rnps1	70	66.204	ENSACIG00000014367	-	80	67.532	Amphilophus_citrinellus
ENSXETG00000024439	rnps1	70	55.760	ENSAPLG00000006231	RNPS1	56	88.000	Anas_platyrhynchos
ENSXETG00000024439	rnps1	73	68.889	ENSACAG00000004088	RNPS1	91	68.000	Anolis_carolinensis
ENSXETG00000024439	rnps1	76	70.085	ENSANAG00000029802	-	92	67.500	Aotus_nancymaae
ENSXETG00000024439	rnps1	73	71.681	ENSANAG00000028802	RNPS1	81	71.739	Aotus_nancymaae
ENSXETG00000024439	rnps1	71	62.557	ENSACLG00000021537	-	84	68.261	Astatotilapia_calliptera
ENSXETG00000024439	rnps1	70	76.389	ENSBTAG00000009969	RNPS1	81	72.174	Bos_taurus
ENSXETG00000024439	rnps1	73	72.124	ENSCJAG00000014969	RNPS1	94	67.111	Callithrix_jacchus
ENSXETG00000024439	rnps1	73	72.124	ENSCAFG00000019397	RNPS1	78	69.874	Canis_familiaris
ENSXETG00000024439	rnps1	73	72.124	ENSCAFG00020026159	RNPS1	91	68.396	Canis_lupus_dingo
ENSXETG00000024439	rnps1	66	75.122	ENSCHIG00000014621	-	69	70.732	Capra_hircus
ENSXETG00000024439	rnps1	74	77.729	ENSTSYG00000031848	-	93	67.249	Carlito_syrichta
ENSXETG00000024439	rnps1	73	72.124	ENSTSYG00000001629	RNPS1	81	72.174	Carlito_syrichta
ENSXETG00000024439	rnps1	73	72.124	ENSCAPG00000007731	RNPS1	78	69.874	Cavia_aperea
ENSXETG00000024439	rnps1	73	72.124	ENSCPOG00000002066	RNPS1	81	72.174	Cavia_porcellus
ENSXETG00000024439	rnps1	73	75.221	ENSCCAG00000034480	RNPS1	81	74.783	Cebus_capucinus
ENSXETG00000024439	rnps1	88	71.062	ENSCATG00000042361	-	78	67.797	Cercocebus_atys
ENSXETG00000024439	rnps1	73	72.124	ENSCATG00000013756	RNPS1	93	65.652	Cercocebus_atys
ENSXETG00000024439	rnps1	73	72.124	ENSCLAG00000015546	RNPS1	81	72.174	Chinchilla_lanigera
ENSXETG00000024439	rnps1	71	75.229	ENSCSAG00000005219	-	77	71.552	Chlorocebus_sabaeus
ENSXETG00000024439	rnps1	73	72.566	ENSCHOG00000004866	RNPS1	78	70.293	Choloepus_hoffmanni
ENSXETG00000024439	rnps1	73	72.124	ENSCANG00000041307	RNPS1	91	67.111	Colobus_angolensis_palliatus
ENSXETG00000024439	rnps1	66	64.423	ENSCANG00000030189	-	56	73.600	Colobus_angolensis_palliatus
ENSXETG00000024439	rnps1	73	72.124	ENSCGRG00001020431	Rnps1	81	72.174	Cricetulus_griseus_chok1gshd
ENSXETG00000024439	rnps1	71	76.364	ENSCGRG00000014021	Rnps1	78	72.398	Cricetulus_griseus_crigri
ENSXETG00000024439	rnps1	71	73.059	ENSCSEG00000000402	RNPS1	73	69.565	Cynoglossus_semilaevis
ENSXETG00000024439	rnps1	78	68.595	ENSCVAG00000010868	RNPS1	84	69.262	Cyprinodon_variegatus
ENSXETG00000024439	rnps1	70	67.281	ENSDARG00000100188	RNPS1	80	66.667	Danio_rerio
ENSXETG00000024439	rnps1	70	67.281	ENSDARG00000116743	rnps1	80	66.667	Danio_rerio
ENSXETG00000024439	rnps1	73	72.124	ENSDNOG00000016081	RNPS1	78	69.874	Dasypus_novemcinctus
ENSXETG00000024439	rnps1	73	72.124	ENSDORG00000001755	Rnps1	81	72.174	Dipodomys_ordii
ENSXETG00000024439	rnps1	73	72.124	ENSEASG00005004862	RNPS1	78	69.874	Equus_asinus_asinus
ENSXETG00000024439	rnps1	74	69.565	ENSECAG00000023288	RNPS1	82	65.652	Equus_caballus
ENSXETG00000024439	rnps1	70	76.037	ENSFCAG00000007690	RNPS1	81	71.739	Felis_catus
ENSXETG00000024439	rnps1	70	76.852	ENSFALG00000004868	RNPS1	80	75.109	Ficedula_albicollis
ENSXETG00000024439	rnps1	73	72.124	ENSFDAG00000003386	RNPS1	81	72.174	Fukomys_damarensis
ENSXETG00000024439	rnps1	70	76.959	ENSGALG00000009288	RNPS1	80	75.217	Gallus_gallus
ENSXETG00000024439	rnps1	78	66.116	ENSGAFG00000005457	RNPS1	84	68.443	Gambusia_affinis
ENSXETG00000024439	rnps1	71	73.853	ENSGACG00000011261	RNPS1	82	70.638	Gasterosteus_aculeatus
ENSXETG00000024439	rnps1	73	73.451	ENSGAGG00000010452	RNPS1	76	72.881	Gopherus_agassizii
ENSXETG00000024439	rnps1	67	74.038	ENSGGOG00000026421	-	79	69.712	Gorilla_gorilla
ENSXETG00000024439	rnps1	73	72.124	ENSGGOG00000014275	RNPS1	90	68.372	Gorilla_gorilla
ENSXETG00000024439	rnps1	71	62.557	ENSHBUG00000017337	-	79	68.261	Haplochromis_burtoni
ENSXETG00000024439	rnps1	70	76.037	ENSHGLG00000006292	-	92	67.949	Heterocephalus_glaber_female
ENSXETG00000024439	rnps1	73	72.124	ENSHGLG00000013957	RNPS1	81	72.174	Heterocephalus_glaber_female
ENSXETG00000024439	rnps1	71	63.514	ENSHGLG00100017879	-	75	59.389	Heterocephalus_glaber_male
ENSXETG00000024439	rnps1	85	73.282	ENSHGLG00100015267	-	82	68.696	Heterocephalus_glaber_male
ENSXETG00000024439	rnps1	73	72.124	ENSHGLG00100003539	RNPS1	81	72.174	Heterocephalus_glaber_male
ENSXETG00000024439	rnps1	71	68.349	ENSIPUG00000011746	rnps1	88	67.391	Ictalurus_punctatus
ENSXETG00000024439	rnps1	73	72.566	ENSJJAG00000015576	-	81	72.609	Jaculus_jaculus
ENSXETG00000024439	rnps1	71	68.807	ENSKMAG00000009135	RNPS1	80	68.831	Kryptolebias_marmoratus
ENSXETG00000024439	rnps1	70	75.115	ENSLACG00000007112	RNPS1	80	72.174	Latimeria_chalumnae
ENSXETG00000024439	rnps1	71	72.146	ENSLOCG00000001758	RNPS1	80	72.609	Lepisosteus_oculatus
ENSXETG00000024439	rnps1	73	72.124	ENSMFAG00000042142	RNPS1	81	72.174	Macaca_fascicularis
ENSXETG00000024439	rnps1	82	72.727	ENSMMUG00000041726	-	82	67.797	Macaca_mulatta
ENSXETG00000024439	rnps1	66	75.490	ENSMMUG00000019238	-	79	71.078	Macaca_mulatta
ENSXETG00000024439	rnps1	82	72.727	ENSMNEG00000024827	-	82	67.797	Macaca_nemestrina
ENSXETG00000024439	rnps1	67	72.115	ENSMLEG00000040232	-	81	68.750	Mandrillus_leucophaeus
ENSXETG00000024439	rnps1	73	72.124	ENSMLEG00000036928	RNPS1	81	72.174	Mandrillus_leucophaeus
ENSXETG00000024439	rnps1	71	74.429	ENSMAMG00000021148	-	79	68.996	Mastacembelus_armatus
ENSXETG00000024439	rnps1	71	62.727	ENSMZEG00005006256	-	80	68.398	Maylandia_zebra
ENSXETG00000024439	rnps1	71	76.364	ENSMGAG00000010042	RNPS1	90	75.455	Meleagris_gallopavo
ENSXETG00000024439	rnps1	73	72.124	ENSMICG00000031543	RNPS1	81	72.174	Microcebus_murinus
ENSXETG00000024439	rnps1	73	72.124	ENSMOCG00000003429	Rnps1	81	72.174	Microtus_ochrogaster
ENSXETG00000024439	rnps1	70	74.194	ENSMMOG00000010863	RNPS1	80	71.616	Mola_mola
ENSXETG00000024439	rnps1	73	82.301	ENSMODG00000015891	RNPS1	78	81.590	Monodelphis_domestica
ENSXETG00000024439	rnps1	73	72.124	ENSMUSG00000034681	Rnps1	81	72.174	Mus_musculus
ENSXETG00000024439	rnps1	72	73.094	MGP_PahariEiJ_G0023498	Rnps1	81	72.174	Mus_pahari
ENSXETG00000024439	rnps1	73	72.124	MGP_SPRETEiJ_G0022092	Rnps1	81	72.174	Mus_spretus
ENSXETG00000024439	rnps1	73	72.124	ENSMLUG00000016808	RNPS1	78	69.874	Myotis_lucifugus
ENSXETG00000024439	rnps1	70	74.654	ENSNGAG00000023702	Rnps1	81	72.174	Nannospalax_galili
ENSXETG00000024439	rnps1	70	71.296	ENSNBRG00000023437	RNPS1	80	68.996	Neolamprologus_brichardi
ENSXETG00000024439	rnps1	84	74.231	ENSNLEG00000009243	RNPS1	92	71.304	Nomascus_leucogenys
ENSXETG00000024439	rnps1	73	72.566	ENSMEUG00000008882	RNPS1	78	70.293	Notamacropus_eugenii
ENSXETG00000024439	rnps1	73	72.566	ENSOPRG00000016422	RNPS1	78	70.293	Ochotona_princeps
ENSXETG00000024439	rnps1	71	62.727	ENSONIG00000019627	-	80	68.398	Oreochromis_niloticus
ENSXETG00000024439	rnps1	71	64.017	ENSORLG00015011183	RNPS1	76	61.355	Oryzias_latipes_hsok
ENSXETG00000024439	rnps1	73	75.664	ENSOARG00000018056	-	66	69.874	Ovis_aries
ENSXETG00000024439	rnps1	75	68.398	ENSPPAG00000037836	-	90	68.372	Pan_paniscus
ENSXETG00000024439	rnps1	81	72.289	ENSPPAG00000011845	RNPS1	82	66.957	Pan_paniscus
ENSXETG00000024439	rnps1	70	76.037	ENSPPRG00000011255	RNPS1	81	71.739	Panthera_pardus
ENSXETG00000024439	rnps1	67	74.519	ENSPTRG00000046326	-	90	65.126	Pan_troglodytes
ENSXETG00000024439	rnps1	73	72.124	ENSPTRG00000031310	RNPS1	81	72.174	Pan_troglodytes
ENSXETG00000024439	rnps1	67	54.808	ENSPANG00000033576	-	75	51.980	Papio_anubis
ENSXETG00000024439	rnps1	73	72.124	ENSPANG00000015748	RNPS1	81	72.174	Papio_anubis
ENSXETG00000024439	rnps1	71	80.455	ENSPKIG00000023465	RNPS1	80	67.826	Paramormyrops_kingsleyae
ENSXETG00000024439	rnps1	73	73.451	ENSPSIG00000006048	RNPS1	76	72.881	Pelodiscus_sinensis
ENSXETG00000024439	rnps1	73	72.124	ENSPEMG00000012797	Rnps1	81	72.174	Peromyscus_maniculatus_bairdii
ENSXETG00000024439	rnps1	73	72.566	ENSPCIG00000025012	RNPS1	81	72.609	Phascolarctos_cinereus
ENSXETG00000024439	rnps1	78	66.942	ENSPFOG00000009978	RNPS1	84	69.262	Poecilia_formosa
ENSXETG00000024439	rnps1	78	66.942	ENSPLAG00000009343	RNPS1	84	69.262	Poecilia_latipinna
ENSXETG00000024439	rnps1	78	66.942	ENSPMEG00000008552	RNPS1	84	69.262	Poecilia_mexicana
ENSXETG00000024439	rnps1	78	66.942	ENSPREG00000001843	RNPS1	84	69.262	Poecilia_reticulata
ENSXETG00000024439	rnps1	73	69.912	ENSPCAG00000004514	RNPS1	78	67.782	Procavia_capensis
ENSXETG00000024439	rnps1	73	72.124	ENSPCOG00000005478	RNPS1	81	72.174	Propithecus_coquereli
ENSXETG00000024439	rnps1	73	72.124	ENSPVAG00000005105	RNPS1	78	69.874	Pteropus_vampyrus
ENSXETG00000024439	rnps1	71	66.063	ENSPNAG00000017784	-	80	71.983	Pygocentrus_nattereri
ENSXETG00000024439	rnps1	71	73.059	ENSPNAG00000025479	RNPS1	80	67.826	Pygocentrus_nattereri
ENSXETG00000024439	rnps1	73	72.124	ENSRNOG00000008703	Rnps1	78	69.874	Rattus_norvegicus
ENSXETG00000024439	rnps1	76	67.521	ENSRNOG00000027239	AABR07037800.1	75	67.521	Rattus_norvegicus
ENSXETG00000024439	rnps1	70	74.654	ENSRBIG00000038965	-	92	66.667	Rhinopithecus_bieti
ENSXETG00000024439	rnps1	73	72.124	ENSRROG00000041252	RNPS1	91	67.111	Rhinopithecus_roxellana
ENSXETG00000024439	rnps1	73	72.124	ENSSBOG00000027927	RNPS1	81	72.174	Saimiri_boliviensis_boliviensis
ENSXETG00000024439	rnps1	73	72.566	ENSSHAG00000016951	RNPS1	78	70.293	Sarcophilus_harrisii
ENSXETG00000024439	rnps1	70	75.463	ENSSFOG00015019341	-	73	68.932	Scleropages_formosus
ENSXETG00000024439	rnps1	71	76.364	ENSSFOG00015022746	RNPS1	82	71.053	Scleropages_formosus
ENSXETG00000024439	rnps1	71	67.580	ENSSDUG00000011453	RNPS1	82	62.288	Seriola_dumerili
ENSXETG00000024439	rnps1	73	73.894	ENSSPUG00000016588	RNPS1	76	72.881	Sphenodon_punctatus
ENSXETG00000024439	rnps1	73	72.566	ENSSSCG00000008048	RNPS1	78	70.293	Sus_scrofa
ENSXETG00000024439	rnps1	70	76.852	ENSTGUG00000003237	RNPS1	80	75.109	Taeniopygia_guttata
ENSXETG00000024439	rnps1	71	67.431	ENSTRUG00000008602	RNPS1	80	66.087	Takifugu_rubripes
ENSXETG00000024439	rnps1	70	68.664	ENSTNIG00000009753	RNPS1	78	67.249	Tetraodon_nigroviridis
ENSXETG00000024439	rnps1	84	75.000	ENSTBEG00000009098	RNPS1	87	69.874	Tupaia_belangeri
ENSXETG00000024439	rnps1	73	72.124	ENSTTRG00000008220	RNPS1	78	69.874	Tursiops_truncatus
ENSXETG00000024439	rnps1	73	72.124	ENSUAMG00000004462	RNPS1	87	69.874	Ursus_americanus
ENSXETG00000024439	rnps1	73	72.124	ENSUMAG00000022327	RNPS1	78	69.874	Ursus_maritimus
ENSXETG00000024439	rnps1	73	72.124	ENSVVUG00000009244	RNPS1	78	69.874	Vulpes_vulpes
ENSXETG00000024439	rnps1	71	68.349	ENSXMAG00000004827	RNPS1	80	68.831	Xiphophorus_maculatus