EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Orthologs

Description

Ensembl ID: ENSXETG00000024458 (Gene tree)
Gene ID: -
Gene Symbol: zic3
Alias: -
Full Name: Xenopus tropicalis Zic family member 3 (zic3)%2C mRNA.
Gene Type: protein_coding
Species: Xenopus_tropicalis
Status: putative
Strand: Plus strand
Length: 3800 bases
Position: chrGL172667.1:2123162-2126961
Accession: NM_001005691
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSXETP00000052876	zf-C2H2	PF00096.26	1.7e-22	1	3
ENSXETP00000052876	zf-C2H2	PF00096.26	1.7e-22	2	3
ENSXETP00000052876	zf-C2H2	PF00096.26	1.7e-22	3	3
ENSXETP00000052876	zf-met	PF12874.7	5.3e-05	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSXETT00000052876	-	2380	-	ENSXETP00000052876	441 (aa)	-	Q6DJQ6

Gene Model

Click here to download ENSXETG00000024458's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSXETG00000024458's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSXETG00000024458	zic3	100	76.383	ENSG00000156925	ZIC3	100	76.383	Homo_sapiens
ENSXETG00000024458	zic3	100	76.809	ENSANAG00000019614	ZIC3	100	76.809	Aotus_nancymaae
ENSXETG00000024458	zic3	100	76.809	ENSCJAG00000013792	ZIC3	100	76.809	Callithrix_jacchus
ENSXETG00000024458	zic3	100	77.186	ENSCAFG00000018979	ZIC3	100	77.186	Canis_familiaris
ENSXETG00000024458	zic3	100	74.468	ENSTSYG00000003356	ZIC3	100	75.106	Carlito_syrichta
ENSXETG00000024458	zic3	56	86.640	ENSCPOG00000002374	ZIC3	99	86.640	Cavia_porcellus
ENSXETG00000024458	zic3	100	77.021	ENSCCAG00000025983	ZIC3	100	77.021	Cebus_capucinus
ENSXETG00000024458	zic3	100	77.399	ENSCATG00000036569	ZIC3	100	77.399	Cercocebus_atys
ENSXETG00000024458	zic3	100	76.759	ENSCLAG00000001934	ZIC3	100	76.759	Chinchilla_lanigera
ENSXETG00000024458	zic3	93	80.374	ENSCPBG00000026115	ZIC3	100	80.607	Chrysemys_picta_bellii
ENSXETG00000024458	zic3	100	77.186	ENSCANG00000017505	ZIC3	100	77.186	Colobus_angolensis_palliatus
ENSXETG00000024458	zic3	100	77.186	ENSCGRG00001024527	Zic3	100	77.186	Cricetulus_griseus_chok1gshd
ENSXETG00000024458	zic3	100	76.759	ENSDORG00000025481	Zic3	100	76.759	Dipodomys_ordii
ENSXETG00000024458	zic3	100	77.186	ENSFCAG00000025684	ZIC3	100	77.186	Felis_catus
ENSXETG00000024458	zic3	82	79.412	ENSFDAG00000014929	ZIC3	99	86.640	Fukomys_damarensis
ENSXETG00000024458	zic3	92	77.030	ENSGAGG00000004149	ZIC3	92	77.262	Gopherus_agassizii
ENSXETG00000024458	zic3	100	76.759	ENSGGOG00000011914	ZIC3	100	76.759	Gorilla_gorilla
ENSXETG00000024458	zic3	100	76.546	ENSHGLG00000006298	ZIC3	100	76.546	Heterocephalus_glaber_female
ENSXETG00000024458	zic3	71	52.848	ENSHGLG00100002829	ZIC3	98	61.218	Heterocephalus_glaber_male
ENSXETG00000024458	zic3	100	76.759	ENSJJAG00000022714	Zic3	100	76.759	Jaculus_jaculus
ENSXETG00000024458	zic3	100	79.911	ENSLACG00000014597	ZIC3	100	79.911	Latimeria_chalumnae
ENSXETG00000024458	zic3	89	75.303	ENSLAFG00000007048	ZIC3	99	78.149	Loxodonta_africana
ENSXETG00000024458	zic3	100	77.399	ENSMFAG00000027018	ZIC3	100	77.399	Macaca_fascicularis
ENSXETG00000024458	zic3	86	78.186	ENSMMUG00000002023	ZIC3	89	78.186	Macaca_mulatta
ENSXETG00000024458	zic3	100	77.399	ENSMNEG00000040682	ZIC3	100	77.399	Macaca_nemestrina
ENSXETG00000024458	zic3	100	77.399	ENSMLEG00000004378	ZIC3	100	77.399	Mandrillus_leucophaeus
ENSXETG00000024458	zic3	100	77.186	ENSMAUG00000009402	Zic3	100	77.186	Mesocricetus_auratus
ENSXETG00000024458	zic3	100	77.234	ENSMICG00000042529	ZIC3	100	77.234	Microcebus_murinus
ENSXETG00000024458	zic3	100	77.350	ENSMOCG00000020544	Zic3	100	77.350	Microtus_ochrogaster
ENSXETG00000024458	zic3	100	76.972	MGP_CAROLIEiJ_G0033101	Zic3	99	87.045	Mus_caroli
ENSXETG00000024458	zic3	100	76.972	ENSMUSG00000067860	Zic3	99	87.045	Mus_musculus
ENSXETG00000024458	zic3	100	76.972	MGP_PahariEiJ_G0031644	Zic3	99	87.045	Mus_pahari
ENSXETG00000024458	zic3	100	76.972	MGP_SPRETEiJ_G0034256	Zic3	99	87.045	Mus_spretus
ENSXETG00000024458	zic3	100	76.972	ENSNGAG00000023346	Zic3	100	76.972	Nannospalax_galili
ENSXETG00000024458	zic3	81	84.507	ENSNLEG00000003005	-	100	84.507	Nomascus_leucogenys
ENSXETG00000024458	zic3	100	76.759	ENSODEG00000005556	ZIC3	100	76.759	Octodon_degus
ENSXETG00000024458	zic3	100	76.759	ENSPPAG00000030013	ZIC3	100	76.759	Pan_paniscus
ENSXETG00000024458	zic3	100	76.809	ENSPPRG00000010839	ZIC3	100	76.809	Panthera_pardus
ENSXETG00000024458	zic3	100	76.759	ENSPTRG00000043849	ZIC3	100	76.759	Pan_troglodytes
ENSXETG00000024458	zic3	100	77.399	ENSPANG00000011357	ZIC3	100	77.399	Papio_anubis
ENSXETG00000024458	zic3	100	77.111	ENSPKIG00000017705	zic3	100	77.111	Paramormyrops_kingsleyae
ENSXETG00000024458	zic3	66	85.666	ENSPSIG00000011896	ZIC3	99	85.666	Pelodiscus_sinensis
ENSXETG00000024458	zic3	100	77.186	ENSPEMG00000022168	Zic3	100	77.186	Peromyscus_maniculatus_bairdii
ENSXETG00000024458	zic3	100	76.546	ENSPCOG00000021557	ZIC3	100	76.546	Propithecus_coquereli
ENSXETG00000024458	zic3	100	76.546	ENSRNOG00000000861	Zic3	100	76.546	Rattus_norvegicus
ENSXETG00000024458	zic3	100	77.186	ENSRBIG00000030660	ZIC3	100	77.186	Rhinopithecus_bieti
ENSXETG00000024458	zic3	100	77.186	ENSRROG00000028410	ZIC3	100	77.186	Rhinopithecus_roxellana
ENSXETG00000024458	zic3	100	76.809	ENSSBOG00000024684	ZIC3	100	76.809	Saimiri_boliviensis_boliviensis
ENSXETG00000024458	zic3	99	70.917	ENSSFOG00015008079	zic3	100	70.917	Scleropages_formosus
ENSXETG00000024458	zic3	99	76.053	ENSSFOG00015011731	zic3	100	76.053	Scleropages_formosus
ENSXETG00000024458	zic3	84	78.608	ENSTGUG00000002155	ZIC3	100	79.795	Taeniopygia_guttata
ENSXETG00000024458	zic3	100	77.186	ENSVVUG00000021378	ZIC3	100	77.186	Vulpes_vulpes