EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Orthologs

Description

Ensembl ID: ENSXETG00000024532 (Gene tree)
Gene ID: -
Gene Symbol: pus3
Alias: -
Full Name: Xenopus tropicalis pseudouridylate synthase 3 (pus3)%2C mRNA.
Gene Type: protein_coding
Species: Xenopus_tropicalis
Status: putative
Strand: Plus strand
Length: 3680 bases
Position: chrGL173281.1:374715-378394
Accession: NM_203638
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSXETP00000052966	PseudoU_synth_1	PF01416.20	2.6e-34	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSXETT00000052966	-	2095	XM_012970245	ENSXETP00000052966	508 (aa)	XP_012825699	F6ZXE9

Gene Model

Click here to download ENSXETG00000024532's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSXETG00000024532's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSXETG00000024532	pus3	82	57.208	ENSG00000110060	PUS3	95	56.886	Homo_sapiens
ENSXETG00000024532	pus3	80	52.471	ENSAPOG00000019483	pus3	99	50.109	Acanthochromis_polyacanthus
ENSXETG00000024532	pus3	80	56.977	ENSAMEG00000000144	PUS3	89	56.977	Ailuropoda_melanoleuca
ENSXETG00000024532	pus3	60	51.652	ENSACIG00000024479	pus3	96	54.221	Amphilophus_citrinellus
ENSXETG00000024532	pus3	80	50.112	ENSAOCG00000006589	pus3	90	50.112	Amphiprion_ocellaris
ENSXETG00000024532	pus3	80	50.339	ENSAPEG00000014617	pus3	90	50.339	Amphiprion_percula
ENSXETG00000024532	pus3	50	31.399	ENSATEG00000020688	pus1	68	31.399	Anabas_testudineus
ENSXETG00000024532	pus3	80	51.039	ENSATEG00000022731	pus3	89	51.039	Anabas_testudineus
ENSXETG00000024532	pus3	50	31.206	ENSAPLG00000004946	PUSL1	93	31.206	Anas_platyrhynchos
ENSXETG00000024532	pus3	80	56.410	ENSAPLG00000013285	PUS3	98	56.410	Anas_platyrhynchos
ENSXETG00000024532	pus3	81	55.452	ENSACAG00000000186	PUS3	95	55.452	Anolis_carolinensis
ENSXETG00000024532	pus3	81	58.065	ENSANAG00000035614	PUS3	90	58.065	Aotus_nancymaae
ENSXETG00000024532	pus3	80	49.550	ENSACLG00000007356	pus3	91	49.550	Astatotilapia_calliptera
ENSXETG00000024532	pus3	81	50.346	ENSAMXG00000019534	pus3	87	50.346	Astyanax_mexicanus
ENSXETG00000024532	pus3	80	58.372	ENSBTAG00000014339	PUS3	89	58.372	Bos_taurus
ENSXETG00000024532	pus3	70	35.156	WBGene00006473	tag-124	94	34.343	Caenorhabditis_elegans
ENSXETG00000024532	pus3	81	57.373	ENSCJAG00000046645	PUS3	90	57.373	Callithrix_jacchus
ENSXETG00000024532	pus3	81	57.044	ENSCAFG00000010534	PUS3	89	57.044	Canis_familiaris
ENSXETG00000024532	pus3	81	57.044	ENSCAFG00020010659	PUS3	89	57.044	Canis_lupus_dingo
ENSXETG00000024532	pus3	80	57.763	ENSCHIG00000012260	PUS3	89	57.763	Capra_hircus
ENSXETG00000024532	pus3	81	56.912	ENSTSYG00000014744	PUS3	89	56.912	Carlito_syrichta
ENSXETG00000024532	pus3	87	53.361	ENSCAPG00000012231	PUS3	98	53.361	Cavia_aperea
ENSXETG00000024532	pus3	87	53.361	ENSCPOG00000032587	PUS3	98	53.361	Cavia_porcellus
ENSXETG00000024532	pus3	81	57.834	ENSCCAG00000035999	PUS3	90	57.834	Cebus_capucinus
ENSXETG00000024532	pus3	81	57.895	ENSCATG00000043123	PUS3	90	57.895	Cercocebus_atys
ENSXETG00000024532	pus3	81	56.751	ENSCLAG00000014947	PUS3	90	56.751	Chinchilla_lanigera
ENSXETG00000024532	pus3	81	58.581	ENSCSAG00000002281	PUS3	90	58.352	Chlorocebus_sabaeus
ENSXETG00000024532	pus3	68	60.606	ENSCHOG00000008442	PUS3	96	60.606	Choloepus_hoffmanni
ENSXETG00000024532	pus3	51	30.847	ENSCPBG00000022621	PUSL1	98	30.847	Chrysemys_picta_bellii
ENSXETG00000024532	pus3	51	51.880	ENSCPBG00000011173	PUS3	92	51.880	Chrysemys_picta_bellii
ENSXETG00000024532	pus3	54	33.851	ENSCING00000009062	-	63	33.851	Ciona_intestinalis
ENSXETG00000024532	pus3	72	32.500	ENSCSAVG00000002211	-	90	32.587	Ciona_savignyi
ENSXETG00000024532	pus3	81	57.437	ENSCANG00000038729	PUS3	90	57.437	Colobus_angolensis_palliatus
ENSXETG00000024532	pus3	81	56.452	ENSCGRG00001019842	Pus3	90	56.452	Cricetulus_griseus_chok1gshd
ENSXETG00000024532	pus3	81	56.221	ENSCGRG00000010155	Pus3	90	56.221	Cricetulus_griseus_crigri
ENSXETG00000024532	pus3	80	50.588	ENSCSEG00000007948	pus3	89	50.588	Cynoglossus_semilaevis
ENSXETG00000024532	pus3	52	32.000	ENSCVAG00000001265	pus1	66	32.000	Cyprinodon_variegatus
ENSXETG00000024532	pus3	80	50.227	ENSCVAG00000022150	pus3	90	50.227	Cyprinodon_variegatus
ENSXETG00000024532	pus3	86	50.435	ENSDARG00000028976	pus3	96	50.655	Danio_rerio
ENSXETG00000024532	pus3	81	55.936	ENSDNOG00000040719	PUS3	90	55.936	Dasypus_novemcinctus
ENSXETG00000024532	pus3	84	55.824	ENSDORG00000001819	Pus3	93	55.824	Dipodomys_ordii
ENSXETG00000024532	pus3	76	39.954	FBgn0034703	CG3045	85	39.954	Drosophila_melanogaster
ENSXETG00000024532	pus3	80	52.693	ENSETEG00000013067	PUS3	88	52.693	Echinops_telfairi
ENSXETG00000024532	pus3	79	50.199	ENSEBUG00000002154	pus3	73	50.199	Eptatretus_burgeri
ENSXETG00000024532	pus3	84	56.696	ENSEASG00005023003	PUS3	92	56.696	Equus_asinus_asinus
ENSXETG00000024532	pus3	84	56.473	ENSECAG00000007581	PUS3	92	56.473	Equus_caballus
ENSXETG00000024532	pus3	82	57.273	ENSEEUG00000010543	PUS3	91	57.273	Erinaceus_europaeus
ENSXETG00000024532	pus3	80	53.256	ENSELUG00000004425	pus3	91	53.256	Esox_lucius
ENSXETG00000024532	pus3	84	56.125	ENSFCAG00000005340	PUS3	92	56.125	Felis_catus
ENSXETG00000024532	pus3	82	60.274	ENSFALG00000005159	PUS3	92	60.274	Ficedula_albicollis
ENSXETG00000024532	pus3	81	56.452	ENSFDAG00000020745	PUS3	89	56.452	Fukomys_damarensis
ENSXETG00000024532	pus3	90	48.065	ENSFHEG00000010984	pus3	93	48.065	Fundulus_heteroclitus
ENSXETG00000024532	pus3	50	31.164	ENSFHEG00000010504	pus1	64	31.164	Fundulus_heteroclitus
ENSXETG00000024532	pus3	80	49.065	ENSGMOG00000004534	pus3	94	49.065	Gadus_morhua
ENSXETG00000024532	pus3	50	30.496	ENSGMOG00000008143	pus1	68	30.496	Gadus_morhua
ENSXETG00000024532	pus3	80	57.907	ENSGALG00000000962	PUS3	93	57.907	Gallus_gallus
ENSXETG00000024532	pus3	50	31.136	ENSGAFG00000006578	pus1	64	30.479	Gambusia_affinis
ENSXETG00000024532	pus3	88	47.619	ENSGAFG00000005615	pus3	97	47.619	Gambusia_affinis
ENSXETG00000024532	pus3	80	50.824	ENSGACG00000002125	pus3	89	50.824	Gasterosteus_aculeatus
ENSXETG00000024532	pus3	87	55.414	ENSGAGG00000000160	PUS3	95	55.414	Gopherus_agassizii
ENSXETG00000024532	pus3	81	57.373	ENSGGOG00000015047	PUS3	90	57.373	Gorilla_gorilla
ENSXETG00000024532	pus3	80	49.324	ENSHBUG00000016532	pus3	91	49.324	Haplochromis_burtoni
ENSXETG00000024532	pus3	86	48.035	ENSHGLG00000018861	-	97	48.035	Heterocephalus_glaber_female
ENSXETG00000024532	pus3	81	56.064	ENSHGLG00000000565	PUS3	90	56.064	Heterocephalus_glaber_female
ENSXETG00000024532	pus3	81	49.657	ENSHGLG00000006599	-	86	49.657	Heterocephalus_glaber_female
ENSXETG00000024532	pus3	50	63.370	ENSHGLG00000015753	-	77	63.370	Heterocephalus_glaber_female
ENSXETG00000024532	pus3	52	53.472	ENSHGLG00100002435	-	97	53.472	Heterocephalus_glaber_male
ENSXETG00000024532	pus3	81	54.756	ENSHGLG00100014825	-	89	54.756	Heterocephalus_glaber_male
ENSXETG00000024532	pus3	57	59.935	ENSHGLG00100008656	-	97	59.935	Heterocephalus_glaber_male
ENSXETG00000024532	pus3	86	45.714	ENSHGLG00100011339	-	97	45.714	Heterocephalus_glaber_male
ENSXETG00000024532	pus3	81	44.292	ENSHGLG00100007519	-	85	44.165	Heterocephalus_glaber_male
ENSXETG00000024532	pus3	79	54.009	ENSHCOG00000015705	pus3	92	53.864	Hippocampus_comes
ENSXETG00000024532	pus3	50	30.450	ENSHCOG00000014288	pus1	61	30.450	Hippocampus_comes
ENSXETG00000024532	pus3	80	53.132	ENSIPUG00000000105	pus3	88	53.132	Ictalurus_punctatus
ENSXETG00000024532	pus3	81	56.522	ENSSTOG00000003721	PUS3	90	56.522	Ictidomys_tridecemlineatus
ENSXETG00000024532	pus3	77	59.242	ENSJJAG00000011306	Pus3	90	57.534	Jaculus_jaculus
ENSXETG00000024532	pus3	80	49.441	ENSKMAG00000016715	pus3	90	49.664	Kryptolebias_marmoratus
ENSXETG00000024532	pus3	80	50.122	ENSLBEG00000004143	pus3	90	50.122	Labrus_bergylta
ENSXETG00000024532	pus3	50	31.271	ENSLBEG00000002845	pus1	71	30.255	Labrus_bergylta
ENSXETG00000024532	pus3	80	56.651	ENSLACG00000011161	PUS3	88	56.651	Latimeria_chalumnae
ENSXETG00000024532	pus3	51	31.930	ENSLACG00000016044	-	81	31.930	Latimeria_chalumnae
ENSXETG00000024532	pus3	80	51.236	ENSLOCG00000011922	pus3	94	51.236	Lepisosteus_oculatus
ENSXETG00000024532	pus3	81	55.991	ENSLAFG00000000535	PUS3	90	55.991	Loxodonta_africana
ENSXETG00000024532	pus3	81	57.895	ENSMFAG00000041002	PUS3	90	57.895	Macaca_fascicularis
ENSXETG00000024532	pus3	81	57.895	ENSMMUG00000041875	PUS3	90	57.895	Macaca_mulatta
ENSXETG00000024532	pus3	81	57.895	ENSMNEG00000045347	PUS3	90	57.895	Macaca_nemestrina
ENSXETG00000024532	pus3	83	57.271	ENSMLEG00000029053	PUS3	92	57.271	Mandrillus_leucophaeus
ENSXETG00000024532	pus3	79	49.433	ENSMAMG00000016741	pus3	91	50.000	Mastacembelus_armatus
ENSXETG00000024532	pus3	80	49.324	ENSMZEG00005015950	pus3	91	49.324	Maylandia_zebra
ENSXETG00000024532	pus3	72	61.413	ENSMGAG00000000851	PUS3	98	61.413	Meleagris_gallopavo
ENSXETG00000024532	pus3	85	55.531	ENSMAUG00000015873	Pus3	94	55.531	Mesocricetus_auratus
ENSXETG00000024532	pus3	81	55.991	ENSMICG00000032941	PUS3	90	55.991	Microcebus_murinus
ENSXETG00000024532	pus3	85	55.088	ENSMOCG00000004901	Pus3	94	55.088	Microtus_ochrogaster
ENSXETG00000024532	pus3	79	51.294	ENSMMOG00000013909	pus3	89	51.168	Mola_mola
ENSXETG00000024532	pus3	82	56.136	ENSMODG00000004222	PUS3	98	56.136	Monodelphis_domestica
ENSXETG00000024532	pus3	80	52.103	ENSMALG00000022420	pus3	89	52.103	Monopterus_albus
ENSXETG00000024532	pus3	85	55.088	MGP_CAROLIEiJ_G0031957	Pus3	97	59.871	Mus_caroli
ENSXETG00000024532	pus3	86	54.031	ENSMUSG00000032103	Pus3	97	59.547	Mus_musculus
ENSXETG00000024532	pus3	76	58.333	MGP_PahariEiJ_G0014822	Pus3	97	59.547	Mus_pahari
ENSXETG00000024532	pus3	86	54.466	MGP_SPRETEiJ_G0033081	Pus3	97	60.194	Mus_spretus
ENSXETG00000024532	pus3	80	57.907	ENSMPUG00000006568	PUS3	89	57.907	Mustela_putorius_furo
ENSXETG00000024532	pus3	83	55.079	ENSMLUG00000030636	PUS3	91	55.079	Myotis_lucifugus
ENSXETG00000024532	pus3	86	54.158	ENSNGAG00000013868	Pus3	97	54.158	Nannospalax_galili
ENSXETG00000024532	pus3	80	50.000	ENSNBRG00000015864	pus3	92	50.000	Neolamprologus_brichardi
ENSXETG00000024532	pus3	81	56.912	ENSNLEG00000007460	PUS3	90	56.912	Nomascus_leucogenys
ENSXETG00000024532	pus3	68	60.317	ENSMEUG00000014040	PUS3	76	60.317	Notamacropus_eugenii
ENSXETG00000024532	pus3	80	58.005	ENSOPRG00000007888	-	89	58.005	Ochotona_princeps
ENSXETG00000024532	pus3	81	58.199	ENSODEG00000004280	PUS3	89	58.199	Octodon_degus
ENSXETG00000024532	pus3	80	51.174	ENSONIG00000016224	pus3	97	50.805	Oreochromis_niloticus
ENSXETG00000024532	pus3	86	55.459	ENSOANG00000000406	PUS3	92	54.367	Ornithorhynchus_anatinus
ENSXETG00000024532	pus3	82	55.606	ENSOCUG00000004468	PUS3	85	55.606	Oryctolagus_cuniculus
ENSXETG00000024532	pus3	79	47.727	ENSORLG00000008445	pus3	90	47.727	Oryzias_latipes
ENSXETG00000024532	pus3	79	46.818	ENSORLG00020008847	pus3	90	46.818	Oryzias_latipes_hni
ENSXETG00000024532	pus3	79	47.045	ENSORLG00015007438	pus3	90	47.045	Oryzias_latipes_hsok
ENSXETG00000024532	pus3	50	30.986	ENSOMEG00000022655	pus1	62	30.986	Oryzias_melastigma
ENSXETG00000024532	pus3	80	49.192	ENSOMEG00000014321	pus3	90	49.192	Oryzias_melastigma
ENSXETG00000024532	pus3	81	55.760	ENSOGAG00000008913	PUS3	90	55.760	Otolemur_garnettii
ENSXETG00000024532	pus3	80	58.140	ENSOARG00000011870	PUS3	89	58.140	Ovis_aries
ENSXETG00000024532	pus3	81	57.373	ENSPPAG00000025809	PUS3	89	57.541	Pan_paniscus
ENSXETG00000024532	pus3	84	55.481	ENSPPRG00000005662	PUS3	92	55.481	Panthera_pardus
ENSXETG00000024532	pus3	84	55.928	ENSPTIG00000001192	PUS3	92	55.928	Panthera_tigris_altaica
ENSXETG00000024532	pus3	82	57.208	ENSPTRG00000004449	PUS3	90	57.373	Pan_troglodytes
ENSXETG00000024532	pus3	81	57.895	ENSPANG00000013782	PUS3	90	57.895	Papio_anubis
ENSXETG00000024532	pus3	86	49.471	ENSPKIG00000000646	pus3	97	49.064	Paramormyrops_kingsleyae
ENSXETG00000024532	pus3	85	57.802	ENSPSIG00000013961	PUS3	91	57.802	Pelodiscus_sinensis
ENSXETG00000024532	pus3	84	49.777	ENSPMGG00000000911	pus3	97	49.777	Periophthalmus_magnuspinnatus
ENSXETG00000024532	pus3	82	56.621	ENSPEMG00000009602	Pus3	90	56.621	Peromyscus_maniculatus_bairdii
ENSXETG00000024532	pus3	82	57.631	ENSPCIG00000010225	PUS3	96	57.631	Phascolarctos_cinereus
ENSXETG00000024532	pus3	80	52.706	ENSPFOG00000009447	pus3	94	52.706	Poecilia_formosa
ENSXETG00000024532	pus3	88	48.560	ENSPLAG00000023343	pus3	97	48.560	Poecilia_latipinna
ENSXETG00000024532	pus3	88	48.560	ENSPMEG00000009870	pus3	97	48.560	Poecilia_mexicana
ENSXETG00000024532	pus3	58	54.655	ENSPREG00000003179	pus3	64	54.655	Poecilia_reticulata
ENSXETG00000024532	pus3	81	56.682	ENSPPYG00000004039	PUS3	90	56.682	Pongo_abelii
ENSXETG00000024532	pus3	81	56.148	ENSPCAG00000000441	PUS3	89	56.148	Procavia_capensis
ENSXETG00000024532	pus3	81	56.682	ENSPCOG00000019330	PUS3	90	56.682	Propithecus_coquereli
ENSXETG00000024532	pus3	80	56.512	ENSPVAG00000002606	PUS3	89	56.512	Pteropus_vampyrus
ENSXETG00000024532	pus3	80	49.775	ENSPNYG00000019615	pus3	91	49.775	Pundamilia_nyererei
ENSXETG00000024532	pus3	81	51.852	ENSPNAG00000014541	pus3	87	51.852	Pygocentrus_nattereri
ENSXETG00000024532	pus3	85	55.310	ENSRNOG00000012994	Pus3	94	55.310	Rattus_norvegicus
ENSXETG00000024532	pus3	80	58.372	ENSRBIG00000044456	PUS3	88	58.140	Rhinopithecus_bieti
ENSXETG00000024532	pus3	82	57.273	ENSRROG00000035245	PUS3	90	57.045	Rhinopithecus_roxellana
ENSXETG00000024532	pus3	54	44.483	YFL001W	DEG1	63	44.483	Saccharomyces_cerevisiae
ENSXETG00000024532	pus3	82	57.306	ENSSBOG00000022433	PUS3	90	57.306	Saimiri_boliviensis_boliviensis
ENSXETG00000024532	pus3	81	56.689	ENSSHAG00000001382	PUS3	90	56.689	Sarcophilus_harrisii
ENSXETG00000024532	pus3	81	52.083	ENSSFOG00015004850	pus3	93	52.083	Scleropages_formosus
ENSXETG00000024532	pus3	71	54.167	ENSSMAG00000020340	pus3	90	49.888	Scophthalmus_maximus
ENSXETG00000024532	pus3	50	30.104	ENSSMAG00000019075	pus1	63	30.104	Scophthalmus_maximus
ENSXETG00000024532	pus3	80	50.112	ENSSDUG00000020825	pus3	90	50.112	Seriola_dumerili
ENSXETG00000024532	pus3	80	50.112	ENSSLDG00000019932	pus3	90	50.112	Seriola_lalandi_dorsalis
ENSXETG00000024532	pus3	56	59.211	ENSSARG00000013826	PUS3	96	59.211	Sorex_araneus
ENSXETG00000024532	pus3	81	58.851	ENSSPUG00000001412	PUS3	89	58.851	Sphenodon_punctatus
ENSXETG00000024532	pus3	80	51.529	ENSSPAG00000019221	pus3	91	51.529	Stegastes_partitus
ENSXETG00000024532	pus3	53	30.263	ENSSPAG00000006272	pus1	71	30.263	Stegastes_partitus
ENSXETG00000024532	pus3	80	57.442	ENSSSCG00000015222	PUS3	89	57.442	Sus_scrofa
ENSXETG00000024532	pus3	82	59.681	ENSTGUG00000000778	-	100	59.681	Taeniopygia_guttata
ENSXETG00000024532	pus3	80	47.416	ENSTRUG00000013050	pus3	95	47.416	Takifugu_rubripes
ENSXETG00000024532	pus3	68	50.000	ENSTNIG00000010307	pus3	92	50.000	Tetraodon_nigroviridis
ENSXETG00000024532	pus3	80	48.956	ENSTNIG00000004929	PUS3	90	48.956	Tetraodon_nigroviridis
ENSXETG00000024532	pus3	81	59.397	ENSTBEG00000004382	PUS3	94	59.397	Tupaia_belangeri
ENSXETG00000024532	pus3	84	55.531	ENSTTRG00000012167	PUS3	95	55.531	Tursiops_truncatus
ENSXETG00000024532	pus3	80	57.209	ENSUAMG00000009297	PUS3	89	57.209	Ursus_americanus
ENSXETG00000024532	pus3	80	57.442	ENSUMAG00000001795	PUS3	89	57.442	Ursus_maritimus
ENSXETG00000024532	pus3	85	54.894	ENSVPAG00000001495	PUS3	97	54.894	Vicugna_pacos
ENSXETG00000024532	pus3	81	57.044	ENSVVUG00000020152	PUS3	89	57.044	Vulpes_vulpes
ENSXETG00000024532	pus3	58	56.962	ENSXMAG00000025077	pus3	73	56.962	Xiphophorus_maculatus
ENSXETG00000024532	pus3	58	56.782	ENSXMAG00000029934	pus3	74	56.782	Xiphophorus_maculatus
ENSXETG00000024532	pus3	86	50.766	ENSXMAG00000028016	pus3	96	50.766	Xiphophorus_maculatus
ENSXETG00000024532	pus3	63	54.094	ENSXMAG00000025659	PUS3	56	54.094	Xiphophorus_maculatus