EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Orthologs

Description

Ensembl ID: ENSXETG00000024721 (Gene tree)
Gene ID: -
Gene Symbol: snrpc
Alias: -
Full Name: small nuclear ribonucleoprotein polypeptide C
Gene Type: protein_coding
Species: Xenopus_tropicalis
Status: putative
Strand: Minus strand
Length: 19670 bases
Position: chrGL173065.1:673001-692670
Accession: XB-GENE-495092
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSXETP00000053216	zf-U1	PF06220.12	8.6e-23	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSXETT00000053216	-	1616	-	ENSXETP00000053216	159 (aa)	-	B0JYS7

Gene Model

Click here to download ENSXETG00000024721's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSXETG00000024721's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSXETG00000024721	snrpc	100	89.937	ENSG00000124562	SNRPC	100	89.937	Homo_sapiens
ENSXETG00000024721	snrpc	100	88.050	ENSAMEG00000000963	SNRPC	87	89.172	Ailuropoda_melanoleuca
ENSXETG00000024721	snrpc	100	88.679	ENSACAG00000015721	SNRPC	87	89.809	Anolis_carolinensis
ENSXETG00000024721	snrpc	100	77.358	ENSANAG00000021026	-	92	77.358	Aotus_nancymaae
ENSXETG00000024721	snrpc	100	89.937	ENSANAG00000019696	-	100	89.937	Aotus_nancymaae
ENSXETG00000024721	snrpc	100	87.421	ENSANAG00000019157	-	100	87.421	Aotus_nancymaae
ENSXETG00000024721	snrpc	99	82.278	ENSANAG00000020588	-	92	82.278	Aotus_nancymaae
ENSXETG00000024721	snrpc	100	89.308	ENSANAG00000007843	-	100	89.308	Aotus_nancymaae
ENSXETG00000024721	snrpc	100	82.390	ENSANAG00000019726	-	92	74.843	Aotus_nancymaae
ENSXETG00000024721	snrpc	100	83.648	ENSAMXG00000032641	snrpc	100	72.327	Astyanax_mexicanus
ENSXETG00000024721	snrpc	100	89.937	ENSBTAG00000024549	SNRPC	100	89.937	Bos_taurus
ENSXETG00000024721	snrpc	100	89.937	ENSCJAG00000015321	-	100	89.937	Callithrix_jacchus
ENSXETG00000024721	snrpc	100	88.679	ENSCJAG00000043055	-	100	88.679	Callithrix_jacchus
ENSXETG00000024721	snrpc	100	87.421	ENSCJAG00000041822	-	100	87.421	Callithrix_jacchus
ENSXETG00000024721	snrpc	100	71.698	ENSCAFG00000025525	-	100	71.698	Canis_familiaris
ENSXETG00000024721	snrpc	100	86.792	ENSCAFG00000031775	-	100	86.792	Canis_familiaris
ENSXETG00000024721	snrpc	99	78.981	ENSCAFG00020009944	-	90	78.981	Canis_lupus_dingo
ENSXETG00000024721	snrpc	100	86.792	ENSCAFG00020005758	-	99	87.261	Canis_lupus_dingo
ENSXETG00000024721	snrpc	100	86.792	ENSCAFG00020017383	-	100	86.792	Canis_lupus_dingo
ENSXETG00000024721	snrpc	100	89.937	ENSCAFG00020005945	-	100	89.937	Canis_lupus_dingo
ENSXETG00000024721	snrpc	100	66.667	ENSCHIG00000005039	-	100	67.296	Capra_hircus
ENSXETG00000024721	snrpc	100	89.308	ENSCHIG00000012087	-	100	89.308	Capra_hircus
ENSXETG00000024721	snrpc	100	89.937	ENSTSYG00000011216	-	100	89.937	Carlito_syrichta
ENSXETG00000024721	snrpc	100	74.843	ENSTSYG00000025721	-	100	68.553	Carlito_syrichta
ENSXETG00000024721	snrpc	81	86.822	ENSTSYG00000029745	-	65	86.822	Carlito_syrichta
ENSXETG00000024721	snrpc	89	88.732	ENSCAPG00000005161	SNRPC	100	88.732	Cavia_aperea
ENSXETG00000024721	snrpc	100	89.937	ENSCPOG00000008563	SNRPC	100	89.937	Cavia_porcellus
ENSXETG00000024721	snrpc	98	69.872	ENSCCAG00000022209	-	95	69.872	Cebus_capucinus
ENSXETG00000024721	snrpc	100	64.780	ENSCCAG00000028293	-	59	88.312	Cebus_capucinus
ENSXETG00000024721	snrpc	98	82.051	ENSCCAG00000022751	-	95	82.051	Cebus_capucinus
ENSXETG00000024721	snrpc	99	71.975	ENSCCAG00000026624	-	66	67.516	Cebus_capucinus
ENSXETG00000024721	snrpc	100	84.277	ENSCCAG00000036059	-	89	84.277	Cebus_capucinus
ENSXETG00000024721	snrpc	100	89.937	ENSCATG00000035787	SNRPC	100	89.937	Cercocebus_atys
ENSXETG00000024721	snrpc	99	73.248	ENSCLAG00000010242	-	96	73.248	Chinchilla_lanigera
ENSXETG00000024721	snrpc	100	89.937	ENSCLAG00000016920	SNRPC	100	89.937	Chinchilla_lanigera
ENSXETG00000024721	snrpc	100	74.843	ENSCHOG00000011439	SNRPC	88	75.796	Choloepus_hoffmanni
ENSXETG00000024721	snrpc	100	89.308	ENSCPBG00000027142	SNRPC	100	89.308	Chrysemys_picta_bellii
ENSXETG00000024721	snrpc	100	89.937	ENSCANG00000028035	SNRPC	100	89.937	Colobus_angolensis_palliatus
ENSXETG00000024721	snrpc	100	89.308	ENSCGRG00001009011	-	100	89.308	Cricetulus_griseus_chok1gshd
ENSXETG00000024721	snrpc	100	77.358	ENSCGRG00001021483	-	100	74.843	Cricetulus_griseus_chok1gshd
ENSXETG00000024721	snrpc	100	87.421	ENSCGRG00000005005	Snrpc	99	88.535	Cricetulus_griseus_crigri
ENSXETG00000024721	snrpc	100	83.019	ENSDARG00000009871	snrpc	100	83.019	Danio_rerio
ENSXETG00000024721	snrpc	52	93.976	ENSDNOG00000042403	-	72	93.976	Dasypus_novemcinctus
ENSXETG00000024721	snrpc	100	89.308	ENSDNOG00000034699	-	99	89.308	Dasypus_novemcinctus
ENSXETG00000024721	snrpc	52	90.361	ENSDORG00000005955	Snrpc	66	72.152	Dipodomys_ordii
ENSXETG00000024721	snrpc	98	82.051	ENSETEG00000011265	-	100	82.051	Echinops_telfairi
ENSXETG00000024721	snrpc	52	89.157	ENSETEG00000008756	-	75	89.610	Echinops_telfairi
ENSXETG00000024721	snrpc	100	89.937	ENSEASG00005021007	SNRPC	100	89.937	Equus_asinus_asinus
ENSXETG00000024721	snrpc	100	89.937	ENSECAG00000026848	SNRPC	100	89.937	Equus_caballus
ENSXETG00000024721	snrpc	99	73.418	ENSEEUG00000014633	SNRPC	90	73.418	Erinaceus_europaeus
ENSXETG00000024721	snrpc	100	76.730	ENSELUG00000000815	SNRPC	100	65.000	Esox_lucius
ENSXETG00000024721	snrpc	100	89.937	ENSFCAG00000044077	-	100	89.937	Felis_catus
ENSXETG00000024721	snrpc	100	89.937	ENSFALG00000003756	SNRPC	100	89.937	Ficedula_albicollis
ENSXETG00000024721	snrpc	100	89.937	ENSFDAG00000018111	SNRPC	100	89.937	Fukomys_damarensis
ENSXETG00000024721	snrpc	100	89.375	ENSGALG00000002773	SNRPC	100	89.375	Gallus_gallus
ENSXETG00000024721	snrpc	100	89.308	ENSGAGG00000003063	SNRPC	100	89.308	Gopherus_agassizii
ENSXETG00000024721	snrpc	100	89.937	ENSGGOG00000012499	SNRPC	100	89.937	Gorilla_gorilla
ENSXETG00000024721	snrpc	100	74.843	ENSHGLG00000017741	-	100	67.296	Heterocephalus_glaber_female
ENSXETG00000024721	snrpc	100	89.937	ENSHGLG00000013981	SNRPC	100	89.937	Heterocephalus_glaber_female
ENSXETG00000024721	snrpc	81	67.442	ENSHGLG00000005871	-	100	62.264	Heterocephalus_glaber_female
ENSXETG00000024721	snrpc	100	74.843	ENSHGLG00100010786	-	100	67.296	Heterocephalus_glaber_male
ENSXETG00000024721	snrpc	100	89.937	ENSHGLG00100009478	SNRPC	100	89.937	Heterocephalus_glaber_male
ENSXETG00000024721	snrpc	100	85.535	ENSHGLG00100017764	-	100	85.535	Heterocephalus_glaber_male
ENSXETG00000024721	snrpc	100	85.093	ENSIPUG00000024851	snrpc	100	83.648	Ictalurus_punctatus
ENSXETG00000024721	snrpc	100	89.937	ENSSTOG00000013786	SNRPC	100	89.937	Ictidomys_tridecemlineatus
ENSXETG00000024721	snrpc	100	89.308	ENSJJAG00000021741	Snrpc	100	89.308	Jaculus_jaculus
ENSXETG00000024721	snrpc	100	84.375	ENSLACG00000013753	SNRPC	88	86.709	Latimeria_chalumnae
ENSXETG00000024721	snrpc	100	89.937	ENSLAFG00000013534	SNRPC	100	89.937	Loxodonta_africana
ENSXETG00000024721	snrpc	100	89.937	ENSMFAG00000031764	-	100	89.937	Macaca_fascicularis
ENSXETG00000024721	snrpc	100	89.308	ENSMFAG00000030525	-	100	89.308	Macaca_fascicularis
ENSXETG00000024721	snrpc	100	80.503	ENSMMUG00000045425	-	100	80.503	Macaca_mulatta
ENSXETG00000024721	snrpc	100	89.308	ENSMMUG00000039415	-	100	89.308	Macaca_mulatta
ENSXETG00000024721	snrpc	100	88.679	ENSMMUG00000000869	-	95	89.744	Macaca_mulatta
ENSXETG00000024721	snrpc	100	89.937	ENSMNEG00000032731	SNRPC	100	89.937	Macaca_nemestrina
ENSXETG00000024721	snrpc	97	63.636	ENSMLEG00000039724	-	81	56.494	Mandrillus_leucophaeus
ENSXETG00000024721	snrpc	100	89.937	ENSMLEG00000033916	-	100	89.937	Mandrillus_leucophaeus
ENSXETG00000024721	snrpc	97	82.581	ENSMLEG00000040224	-	89	82.581	Mandrillus_leucophaeus
ENSXETG00000024721	snrpc	100	86.792	ENSMGAG00000006054	SNRPC	100	89.308	Meleagris_gallopavo
ENSXETG00000024721	snrpc	100	73.585	ENSMICG00000036552	-	87	71.154	Microcebus_murinus
ENSXETG00000024721	snrpc	100	87.421	ENSMICG00000007339	-	100	89.308	Microcebus_murinus
ENSXETG00000024721	snrpc	100	89.308	ENSMICG00000032183	-	100	89.308	Microcebus_murinus
ENSXETG00000024721	snrpc	100	89.308	ENSMOCG00000017609	Snrpc	100	89.308	Microtus_ochrogaster
ENSXETG00000024721	snrpc	100	89.937	ENSMODG00000013904	-	100	89.937	Monodelphis_domestica
ENSXETG00000024721	snrpc	100	65.625	ENSMALG00000001197	snrpc	100	64.151	Monopterus_albus
ENSXETG00000024721	snrpc	100	89.308	MGP_CAROLIEiJ_G0021308	Snrpc	100	89.308	Mus_caroli
ENSXETG00000024721	snrpc	100	89.308	ENSMUSG00000024217	Snrpc	100	89.308	Mus_musculus
ENSXETG00000024721	snrpc	100	88.050	ENSMPUG00000003210	SNRPC	99	89.172	Mustela_putorius_furo
ENSXETG00000024721	snrpc	100	88.050	ENSMLUG00000002488	SNRPC	99	89.172	Myotis_lucifugus
ENSXETG00000024721	snrpc	100	89.308	ENSNGAG00000019686	Snrpc	100	89.308	Nannospalax_galili
ENSXETG00000024721	snrpc	100	89.937	ENSNLEG00000034810	SNRPC	100	89.937	Nomascus_leucogenys
ENSXETG00000024721	snrpc	89	89.437	ENSMEUG00000009300	SNRPC	100	89.437	Notamacropus_eugenii
ENSXETG00000024721	snrpc	100	89.937	ENSODEG00000017080	-	100	89.937	Octodon_degus
ENSXETG00000024721	snrpc	100	89.308	ENSODEG00000020201	-	100	89.308	Octodon_degus
ENSXETG00000024721	snrpc	100	88.679	ENSODEG00000019633	-	100	88.679	Octodon_degus
ENSXETG00000024721	snrpc	77	86.179	ENSODEG00000006008	-	93	86.047	Octodon_degus
ENSXETG00000024721	snrpc	100	89.937	ENSODEG00000018985	-	100	89.937	Octodon_degus
ENSXETG00000024721	snrpc	100	89.937	ENSODEG00000020370	-	100	89.937	Octodon_degus
ENSXETG00000024721	snrpc	89	86.986	ENSOANG00000003405	SNRPC	99	86.986	Ornithorhynchus_anatinus
ENSXETG00000024721	snrpc	100	88.679	ENSOCUG00000026430	-	99	88.679	Oryctolagus_cuniculus
ENSXETG00000024721	snrpc	60	92.632	ENSOCUG00000023292	-	100	88.679	Oryctolagus_cuniculus
ENSXETG00000024721	snrpc	100	89.937	ENSOCUG00000026668	-	100	89.937	Oryctolagus_cuniculus
ENSXETG00000024721	snrpc	97	89.677	ENSOGAG00000008755	-	88	89.172	Otolemur_garnettii
ENSXETG00000024721	snrpc	100	88.050	ENSOGAG00000026269	-	100	88.050	Otolemur_garnettii
ENSXETG00000024721	snrpc	100	89.937	ENSOARG00000010823	SNRPC	100	89.937	Ovis_aries
ENSXETG00000024721	snrpc	100	89.937	ENSPPAG00000043871	SNRPC	100	89.937	Pan_paniscus
ENSXETG00000024721	snrpc	100	89.937	ENSPPRG00000008647	-	100	89.937	Panthera_pardus
ENSXETG00000024721	snrpc	100	59.119	ENSPPRG00000010967	-	52	74.026	Panthera_pardus
ENSXETG00000024721	snrpc	100	89.937	ENSPTIG00000021867	-	100	89.937	Panthera_tigris_altaica
ENSXETG00000024721	snrpc	96	59.211	ENSPTIG00000013329	-	59	76.667	Panthera_tigris_altaica
ENSXETG00000024721	snrpc	100	89.937	ENSPTRG00000018070	SNRPC	100	89.937	Pan_troglodytes
ENSXETG00000024721	snrpc	100	89.937	ENSPANG00000022802	-	100	89.937	Papio_anubis
ENSXETG00000024721	snrpc	100	79.245	ENSPANG00000018228	-	94	79.245	Papio_anubis
ENSXETG00000024721	snrpc	59	84.043	ENSPKIG00000003136	snrpc	83	71.318	Paramormyrops_kingsleyae
ENSXETG00000024721	snrpc	99	89.172	ENSPSIG00000004876	SNRPC	77	89.172	Pelodiscus_sinensis
ENSXETG00000024721	snrpc	99	67.516	ENSPMGG00000022162	snrpc	99	54.268	Periophthalmus_magnuspinnatus
ENSXETG00000024721	snrpc	100	89.308	ENSPEMG00000010773	Snrpc	100	89.308	Peromyscus_maniculatus_bairdii
ENSXETG00000024721	snrpc	100	79.874	ENSPEMG00000002763	-	100	73.585	Peromyscus_maniculatus_bairdii
ENSXETG00000024721	snrpc	99	68.790	ENSPMAG00000000602	snrpc	98	63.057	Petromyzon_marinus
ENSXETG00000024721	snrpc	52	93.976	ENSPPYG00000029902	-	84	93.976	Pongo_abelii
ENSXETG00000024721	snrpc	100	88.050	ENSPCAG00000016885	SNRPC	90	89.172	Procavia_capensis
ENSXETG00000024721	snrpc	100	89.937	ENSPCOG00000004904	SNRPC	100	89.937	Propithecus_coquereli
ENSXETG00000024721	snrpc	100	87.421	ENSPVAG00000015597	SNRPC	87	88.535	Pteropus_vampyrus
ENSXETG00000024721	snrpc	100	82.390	ENSPNAG00000012799	snrpc	100	72.500	Pygocentrus_nattereri
ENSXETG00000024721	snrpc	100	89.308	ENSRNOG00000000493	Snrpc	100	89.308	Rattus_norvegicus
ENSXETG00000024721	snrpc	100	79.874	ENSRBIG00000036353	-	67	83.721	Rhinopithecus_bieti
ENSXETG00000024721	snrpc	100	89.308	ENSRBIG00000022998	-	100	89.308	Rhinopithecus_bieti
ENSXETG00000024721	snrpc	100	89.937	ENSRBIG00000014819	-	100	89.937	Rhinopithecus_bieti
ENSXETG00000024721	snrpc	100	89.937	ENSRBIG00000037567	-	100	89.937	Rhinopithecus_bieti
ENSXETG00000024721	snrpc	100	89.937	ENSRROG00000041300	SNRPC	100	89.937	Rhinopithecus_roxellana
ENSXETG00000024721	snrpc	98	70.513	ENSSBOG00000032882	-	93	72.436	Saimiri_boliviensis_boliviensis
ENSXETG00000024721	snrpc	95	73.510	ENSSBOG00000032361	-	80	75.969	Saimiri_boliviensis_boliviensis
ENSXETG00000024721	snrpc	100	89.937	ENSSBOG00000031528	-	100	89.937	Saimiri_boliviensis_boliviensis
ENSXETG00000024721	snrpc	98	75.000	ENSSBOG00000023189	-	91	75.000	Saimiri_boliviensis_boliviensis
ENSXETG00000024721	snrpc	99	89.809	ENSSHAG00000000945	-	87	89.809	Sarcophilus_harrisii
ENSXETG00000024721	snrpc	100	80.000	ENSSFOG00015019150	snrpc	100	77.358	Scleropages_formosus
ENSXETG00000024721	snrpc	52	91.566	ENSSARG00000008970	SNRPC	89	69.182	Sorex_araneus
ENSXETG00000024721	snrpc	100	90.566	ENSSPUG00000002502	SNRPC	100	90.566	Sphenodon_punctatus
ENSXETG00000024721	snrpc	100	89.937	ENSSSCG00000001531	SNRPC	100	89.937	Sus_scrofa
ENSXETG00000024721	snrpc	100	88.679	ENSTGUG00000001773	SNRPC	99	89.241	Taeniopygia_guttata
ENSXETG00000024721	snrpc	60	86.316	ENSTBEG00000015356	-	55	87.013	Tupaia_belangeri
ENSXETG00000024721	snrpc	89	66.197	ENSTBEG00000016759	-	79	66.197	Tupaia_belangeri
ENSXETG00000024721	snrpc	98	82.692	ENSTBEG00000013022	-	100	82.692	Tupaia_belangeri
ENSXETG00000024721	snrpc	100	88.050	ENSTTRG00000007827	SNRPC	86	89.172	Tursiops_truncatus
ENSXETG00000024721	snrpc	97	84.416	ENSVVUG00000010467	-	87	84.615	Vulpes_vulpes
ENSXETG00000024721	snrpc	100	88.679	ENSVVUG00000021947	-	100	88.679	Vulpes_vulpes