EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Orthologs

Description

Ensembl ID: ENSXETG00000024898 (Gene tree)
Gene ID: -
Gene Symbol: polr3f
Alias: -
Full Name: Xenopus tropicalis polymerase (RNA) III (DNA directed) polypeptide F%2C 39 kDa (polr3f)%2C mRNA.
Gene Type: protein_coding
Species: Xenopus_tropicalis
Status: putative
Strand: Minus strand
Length: 9144 bases
Position: chrGL173250.1:468804-477947
Accession: NM_203988
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSXETP00000053524	RNA_pol_Rpc34	PF05158.12	1.7e-100	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSXETT00000053524	-	1349	-	ENSXETP00000053524	314 (aa)	-	Q6P325

Gene Model

Click here to download ENSXETG00000024898's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSXETG00000024898's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSXETG00000024898	polr3f	100	89.241	ENSG00000132664	POLR3F	100	89.241	Homo_sapiens
ENSXETG00000024898	polr3f	100	85.127	ENSAPOG00000008271	polr3f	100	85.127	Acanthochromis_polyacanthus
ENSXETG00000024898	polr3f	100	89.557	ENSAMEG00000005222	POLR3F	100	89.557	Ailuropoda_melanoleuca
ENSXETG00000024898	polr3f	100	80.573	ENSACIG00000006705	polr3f	100	80.573	Amphilophus_citrinellus
ENSXETG00000024898	polr3f	100	85.127	ENSAOCG00000000687	polr3f	100	85.127	Amphiprion_ocellaris
ENSXETG00000024898	polr3f	100	84.810	ENSAPEG00000015263	polr3f	100	84.810	Amphiprion_percula
ENSXETG00000024898	polr3f	88	89.818	ENSATEG00000015539	polr3f	100	89.818	Anabas_testudineus
ENSXETG00000024898	polr3f	88	92.000	ENSAPLG00000005533	POLR3F	100	92.000	Anas_platyrhynchos
ENSXETG00000024898	polr3f	98	88.961	ENSACAG00000014293	POLR3F	99	88.961	Anolis_carolinensis
ENSXETG00000024898	polr3f	100	89.557	ENSANAG00000026726	POLR3F	100	89.557	Aotus_nancymaae
ENSXETG00000024898	polr3f	100	86.076	ENSACLG00000003615	polr3f	100	86.076	Astatotilapia_calliptera
ENSXETG00000024898	polr3f	100	87.261	ENSAMXG00000036020	polr3f	100	87.261	Astyanax_mexicanus
ENSXETG00000024898	polr3f	100	89.241	ENSBTAG00000008825	POLR3F	100	89.241	Bos_taurus
ENSXETG00000024898	polr3f	98	34.194	WBGene00021112	W09C3.4	99	34.194	Caenorhabditis_elegans
ENSXETG00000024898	polr3f	100	89.557	ENSCJAG00000005159	POLR3F	100	89.557	Callithrix_jacchus
ENSXETG00000024898	polr3f	100	89.241	ENSCAFG00000005420	POLR3F	100	89.241	Canis_familiaris
ENSXETG00000024898	polr3f	100	89.241	ENSCAFG00020027500	POLR3F	100	89.241	Canis_lupus_dingo
ENSXETG00000024898	polr3f	100	89.241	ENSCHIG00000014743	POLR3F	100	89.241	Capra_hircus
ENSXETG00000024898	polr3f	100	89.241	ENSTSYG00000004207	POLR3F	100	89.241	Carlito_syrichta
ENSXETG00000024898	polr3f	94	52.365	ENSCAPG00000008423	POLR3F	100	52.365	Cavia_aperea
ENSXETG00000024898	polr3f	100	89.241	ENSCPOG00000002400	POLR3F	100	89.241	Cavia_porcellus
ENSXETG00000024898	polr3f	100	78.797	ENSCCAG00000021800	POLR3F	100	78.797	Cebus_capucinus
ENSXETG00000024898	polr3f	100	88.924	ENSCATG00000019507	POLR3F	100	88.924	Cercocebus_atys
ENSXETG00000024898	polr3f	100	88.924	ENSCLAG00000016296	POLR3F	100	88.924	Chinchilla_lanigera
ENSXETG00000024898	polr3f	100	88.924	ENSCSAG00000011513	POLR3F	100	88.924	Chlorocebus_sabaeus
ENSXETG00000024898	polr3f	73	91.011	ENSCHOG00000013268	POLR3F	73	91.011	Choloepus_hoffmanni
ENSXETG00000024898	polr3f	88	91.636	ENSCPBG00000023473	POLR3F	100	91.636	Chrysemys_picta_bellii
ENSXETG00000024898	polr3f	99	58.917	ENSCING00000001212	-	99	58.917	Ciona_intestinalis
ENSXETG00000024898	polr3f	70	58.559	ENSCSAVG00000003340	-	96	64.497	Ciona_savignyi
ENSXETG00000024898	polr3f	92	88.660	ENSCANG00000037390	POLR3F	100	88.660	Colobus_angolensis_palliatus
ENSXETG00000024898	polr3f	100	89.241	ENSCGRG00001002032	Polr3f	100	89.241	Cricetulus_griseus_chok1gshd
ENSXETG00000024898	polr3f	100	89.241	ENSCGRG00000010852	Polr3f	100	89.241	Cricetulus_griseus_crigri
ENSXETG00000024898	polr3f	100	84.810	ENSCSEG00000001247	polr3f	100	84.810	Cynoglossus_semilaevis
ENSXETG00000024898	polr3f	100	84.810	ENSCVAG00000007611	polr3f	100	84.810	Cyprinodon_variegatus
ENSXETG00000024898	polr3f	100	87.580	ENSDARG00000012572	polr3f	100	87.580	Danio_rerio
ENSXETG00000024898	polr3f	100	87.025	ENSDNOG00000010719	POLR3F	100	87.025	Dasypus_novemcinctus
ENSXETG00000024898	polr3f	100	89.241	ENSDORG00000016352	Polr3f	100	89.241	Dipodomys_ordii
ENSXETG00000024898	polr3f	96	49.669	FBgn0038951	CG5380	99	49.669	Drosophila_melanogaster
ENSXETG00000024898	polr3f	89	53.405	ENSETEG00000015485	-	99	53.405	Echinops_telfairi
ENSXETG00000024898	polr3f	100	74.522	ENSEBUG00000006783	polr3f	100	74.522	Eptatretus_burgeri
ENSXETG00000024898	polr3f	100	89.241	ENSEASG00005002022	POLR3F	100	89.241	Equus_asinus_asinus
ENSXETG00000024898	polr3f	100	89.241	ENSECAG00000009920	POLR3F	100	89.241	Equus_caballus
ENSXETG00000024898	polr3f	80	84.000	ENSEEUG00000000184	POLR3F	80	84.000	Erinaceus_europaeus
ENSXETG00000024898	polr3f	100	87.898	ENSELUG00000001558	polr3f	100	87.898	Esox_lucius
ENSXETG00000024898	polr3f	100	89.557	ENSFCAG00000013828	POLR3F	100	89.557	Felis_catus
ENSXETG00000024898	polr3f	88	92.364	ENSFALG00000007623	POLR3F	100	92.364	Ficedula_albicollis
ENSXETG00000024898	polr3f	100	88.608	ENSFDAG00000002528	POLR3F	100	88.608	Fukomys_damarensis
ENSXETG00000024898	polr3f	100	83.861	ENSFHEG00000006450	polr3f	100	83.861	Fundulus_heteroclitus
ENSXETG00000024898	polr3f	100	89.172	ENSGALG00000008749	POLR3F	100	89.172	Gallus_gallus
ENSXETG00000024898	polr3f	100	85.443	ENSGAFG00000003698	polr3f	100	85.443	Gambusia_affinis
ENSXETG00000024898	polr3f	100	89.490	ENSGAGG00000006151	POLR3F	100	89.490	Gopherus_agassizii
ENSXETG00000024898	polr3f	100	89.241	ENSGGOG00000011543	POLR3F	100	89.241	Gorilla_gorilla
ENSXETG00000024898	polr3f	100	86.392	ENSHBUG00000013806	polr3f	100	86.392	Haplochromis_burtoni
ENSXETG00000024898	polr3f	100	88.608	ENSHGLG00000011867	POLR3F	100	88.608	Heterocephalus_glaber_female
ENSXETG00000024898	polr3f	100	88.608	ENSHGLG00100012577	POLR3F	100	88.608	Heterocephalus_glaber_male
ENSXETG00000024898	polr3f	100	77.215	ENSHCOG00000011751	polr3f	100	77.215	Hippocampus_comes
ENSXETG00000024898	polr3f	100	87.261	ENSIPUG00000013347	polr3f	100	87.261	Ictalurus_punctatus
ENSXETG00000024898	polr3f	100	89.557	ENSSTOG00000013588	POLR3F	100	89.557	Ictidomys_tridecemlineatus
ENSXETG00000024898	polr3f	100	89.873	ENSJJAG00000017513	Polr3f	100	89.873	Jaculus_jaculus
ENSXETG00000024898	polr3f	88	81.818	ENSKMAG00000016495	polr3f	100	81.818	Kryptolebias_marmoratus
ENSXETG00000024898	polr3f	74	93.534	ENSLBEG00000011998	polr3f	100	93.534	Labrus_bergylta
ENSXETG00000024898	polr3f	100	88.535	ENSLACG00000009371	POLR3F	100	88.535	Latimeria_chalumnae
ENSXETG00000024898	polr3f	100	88.854	ENSLOCG00000015701	polr3f	100	88.854	Lepisosteus_oculatus
ENSXETG00000024898	polr3f	100	89.241	ENSLAFG00000004929	POLR3F	100	89.241	Loxodonta_africana
ENSXETG00000024898	polr3f	100	88.924	ENSMFAG00000002227	POLR3F	100	88.924	Macaca_fascicularis
ENSXETG00000024898	polr3f	88	91.636	ENSMMUG00000004143	POLR3F	100	91.636	Macaca_mulatta
ENSXETG00000024898	polr3f	100	88.924	ENSMNEG00000033404	POLR3F	100	88.924	Macaca_nemestrina
ENSXETG00000024898	polr3f	100	88.924	ENSMLEG00000021905	POLR3F	100	88.924	Mandrillus_leucophaeus
ENSXETG00000024898	polr3f	100	85.443	ENSMAMG00000017975	polr3f	100	85.443	Mastacembelus_armatus
ENSXETG00000024898	polr3f	100	85.759	ENSMZEG00005015134	polr3f	100	85.759	Maylandia_zebra
ENSXETG00000024898	polr3f	100	88.854	ENSMGAG00000006691	POLR3F	100	88.854	Meleagris_gallopavo
ENSXETG00000024898	polr3f	100	89.241	ENSMAUG00000020176	Polr3f	100	89.241	Mesocricetus_auratus
ENSXETG00000024898	polr3f	100	88.924	ENSMICG00000044519	POLR3F	100	88.924	Microcebus_murinus
ENSXETG00000024898	polr3f	100	89.557	ENSMOCG00000018352	Polr3f	100	89.557	Microtus_ochrogaster
ENSXETG00000024898	polr3f	93	89.116	ENSMMOG00000018477	polr3f	99	89.116	Mola_mola
ENSXETG00000024898	polr3f	100	88.924	ENSMODG00000005624	POLR3F	100	88.924	Monodelphis_domestica
ENSXETG00000024898	polr3f	100	86.392	ENSMALG00000006685	polr3f	100	86.392	Monopterus_albus
ENSXETG00000024898	polr3f	100	88.291	MGP_CAROLIEiJ_G0024385	Polr3f	100	88.291	Mus_caroli
ENSXETG00000024898	polr3f	100	88.291	ENSMUSG00000027427	Polr3f	100	88.291	Mus_musculus
ENSXETG00000024898	polr3f	100	88.291	MGP_PahariEiJ_G0025829	Polr3f	100	88.291	Mus_pahari
ENSXETG00000024898	polr3f	100	88.291	MGP_SPRETEiJ_G0025304	Polr3f	100	88.291	Mus_spretus
ENSXETG00000024898	polr3f	100	67.692	ENSMPUG00000001252	-	100	67.692	Mustela_putorius_furo
ENSXETG00000024898	polr3f	100	89.557	ENSMLUG00000014844	POLR3F	100	89.557	Myotis_lucifugus
ENSXETG00000024898	polr3f	100	88.608	ENSNGAG00000010898	Polr3f	100	88.608	Nannospalax_galili
ENSXETG00000024898	polr3f	100	86.709	ENSNBRG00000020796	polr3f	100	86.709	Neolamprologus_brichardi
ENSXETG00000024898	polr3f	100	89.241	ENSNLEG00000009778	POLR3F	100	89.241	Nomascus_leucogenys
ENSXETG00000024898	polr3f	94	85.085	ENSMEUG00000010320	POLR3F	100	85.085	Notamacropus_eugenii
ENSXETG00000024898	polr3f	100	87.975	ENSOPRG00000003385	POLR3F	100	87.975	Ochotona_princeps
ENSXETG00000024898	polr3f	100	88.924	ENSODEG00000011521	POLR3F	100	88.924	Octodon_degus
ENSXETG00000024898	polr3f	100	86.076	ENSONIG00000006858	polr3f	100	86.076	Oreochromis_niloticus
ENSXETG00000024898	polr3f	100	88.608	ENSOANG00000001253	POLR3F	100	88.608	Ornithorhynchus_anatinus
ENSXETG00000024898	polr3f	100	89.241	ENSOCUG00000015067	POLR3F	100	89.241	Oryctolagus_cuniculus
ENSXETG00000024898	polr3f	100	84.177	ENSORLG00000022412	polr3f	100	84.177	Oryzias_latipes
ENSXETG00000024898	polr3f	100	84.177	ENSORLG00020021944	polr3f	100	84.177	Oryzias_latipes_hni
ENSXETG00000024898	polr3f	100	88.291	ENSOGAG00000002916	POLR3F	100	88.291	Otolemur_garnettii
ENSXETG00000024898	polr3f	100	89.241	ENSOARG00000000315	-	100	89.241	Ovis_aries
ENSXETG00000024898	polr3f	100	54.430	ENSOARG00000008647	-	100	54.430	Ovis_aries
ENSXETG00000024898	polr3f	100	89.241	ENSPPAG00000036681	POLR3F	100	89.241	Pan_paniscus
ENSXETG00000024898	polr3f	100	89.557	ENSPPRG00000024604	POLR3F	100	89.557	Panthera_pardus
ENSXETG00000024898	polr3f	100	89.557	ENSPTIG00000020292	POLR3F	100	89.557	Panthera_tigris_altaica
ENSXETG00000024898	polr3f	100	89.241	ENSPTRG00000013287	POLR3F	100	89.241	Pan_troglodytes
ENSXETG00000024898	polr3f	100	88.924	ENSPANG00000025015	POLR3F	100	88.924	Papio_anubis
ENSXETG00000024898	polr3f	100	88.217	ENSPKIG00000004427	polr3f	100	88.217	Paramormyrops_kingsleyae
ENSXETG00000024898	polr3f	88	92.364	ENSPSIG00000016613	POLR3F	100	92.364	Pelodiscus_sinensis
ENSXETG00000024898	polr3f	100	52.978	ENSPMGG00000018350	polr3f	100	56.013	Periophthalmus_magnuspinnatus
ENSXETG00000024898	polr3f	100	89.873	ENSPEMG00000006966	Polr3f	100	89.873	Peromyscus_maniculatus_bairdii
ENSXETG00000024898	polr3f	100	78.981	ENSPMAG00000005530	polr3f	100	78.981	Petromyzon_marinus
ENSXETG00000024898	polr3f	100	88.608	ENSPCIG00000000908	POLR3F	85	88.608	Phascolarctos_cinereus
ENSXETG00000024898	polr3f	100	85.443	ENSPFOG00000018334	polr3f	100	85.443	Poecilia_formosa
ENSXETG00000024898	polr3f	100	85.443	ENSPLAG00000021803	polr3f	100	85.443	Poecilia_latipinna
ENSXETG00000024898	polr3f	100	85.443	ENSPMEG00000013150	polr3f	100	85.443	Poecilia_mexicana
ENSXETG00000024898	polr3f	100	85.443	ENSPREG00000005278	polr3f	100	85.443	Poecilia_reticulata
ENSXETG00000024898	polr3f	100	89.241	ENSPPYG00000010737	POLR3F	100	89.241	Pongo_abelii
ENSXETG00000024898	polr3f	65	93.919	ENSPCAG00000004893	POLR3F	71	93.919	Procavia_capensis
ENSXETG00000024898	polr3f	100	88.924	ENSPCOG00000004543	POLR3F	100	88.924	Propithecus_coquereli
ENSXETG00000024898	polr3f	100	89.241	ENSPVAG00000000403	POLR3F	100	89.241	Pteropus_vampyrus
ENSXETG00000024898	polr3f	100	86.392	ENSPNYG00000016276	polr3f	100	86.392	Pundamilia_nyererei
ENSXETG00000024898	polr3f	100	87.898	ENSPNAG00000005164	polr3f	100	87.898	Pygocentrus_nattereri
ENSXETG00000024898	polr3f	100	88.608	ENSRNOG00000007548	Polr3f	85	88.608	Rattus_norvegicus
ENSXETG00000024898	polr3f	100	88.924	ENSRBIG00000021268	POLR3F	100	88.924	Rhinopithecus_bieti
ENSXETG00000024898	polr3f	100	88.924	ENSRROG00000039911	POLR3F	100	88.924	Rhinopithecus_roxellana
ENSXETG00000024898	polr3f	100	89.557	ENSSBOG00000018207	POLR3F	100	89.557	Saimiri_boliviensis_boliviensis
ENSXETG00000024898	polr3f	100	68.987	ENSSHAG00000018160	POLR3F	100	69.782	Sarcophilus_harrisii
ENSXETG00000024898	polr3f	100	90.127	ENSSFOG00015022433	polr3f	100	90.127	Scleropages_formosus
ENSXETG00000024898	polr3f	100	84.177	ENSSMAG00000021029	polr3f	100	84.177	Scophthalmus_maximus
ENSXETG00000024898	polr3f	100	77.532	ENSSDUG00000022435	polr3f	100	77.532	Seriola_dumerili
ENSXETG00000024898	polr3f	100	87.025	ENSSLDG00000012761	polr3f	100	87.025	Seriola_lalandi_dorsalis
ENSXETG00000024898	polr3f	100	80.696	ENSSARG00000006039	POLR3F	100	80.696	Sorex_araneus
ENSXETG00000024898	polr3f	100	90.446	ENSSPUG00000001873	POLR3F	100	90.446	Sphenodon_punctatus
ENSXETG00000024898	polr3f	100	77.848	ENSSPAG00000002092	polr3f	100	77.848	Stegastes_partitus
ENSXETG00000024898	polr3f	100	89.241	ENSSSCG00000007095	POLR3F	100	94.828	Sus_scrofa
ENSXETG00000024898	polr3f	100	89.172	ENSTGUG00000005839	POLR3F	100	89.172	Taeniopygia_guttata
ENSXETG00000024898	polr3f	100	84.494	ENSTRUG00000012101	polr3f	100	84.494	Takifugu_rubripes
ENSXETG00000024898	polr3f	100	83.228	ENSTNIG00000006456	polr3f	100	83.228	Tetraodon_nigroviridis
ENSXETG00000024898	polr3f	100	72.468	ENSTBEG00000007921	POLR3F	100	72.468	Tupaia_belangeri
ENSXETG00000024898	polr3f	100	89.241	ENSTTRG00000002580	POLR3F	100	89.241	Tursiops_truncatus
ENSXETG00000024898	polr3f	53	93.373	ENSUAMG00000024166	POLR3F	100	93.373	Ursus_americanus
ENSXETG00000024898	polr3f	100	89.241	ENSUMAG00000024944	POLR3F	100	89.241	Ursus_maritimus
ENSXETG00000024898	polr3f	100	88.608	ENSVPAG00000009063	POLR3F	100	88.608	Vicugna_pacos
ENSXETG00000024898	polr3f	100	89.241	ENSVVUG00000012925	POLR3F	100	89.241	Vulpes_vulpes
ENSXETG00000024898	polr3f	88	87.636	ENSXCOG00000010301	polr3f	100	87.636	Xiphophorus_couchianus
ENSXETG00000024898	polr3f	100	85.443	ENSXMAG00000004604	polr3f	100	85.443	Xiphophorus_maculatus