EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSXETG00000024918 (Gene tree)
Gene ID: -
Gene Symbol: snrpd3
Alias: -
Full Name: small nuclear ribonucleoprotein D3 polypeptide
Gene Type: protein_coding
Species: Xenopus_tropicalis
Status: putative
Strand: Minus strand
Length: 3595 bases
Position: chrGL172648.1:4944813-4948407
Accession: XB-GENE-1014502
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSXETP00000053564	LSM	PF01423.22	8e-16	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSXETT00000053564	-	387	-	ENSXETP00000053564	128 (aa)	-	F7AYT9

Gene Model

Click here to download ENSXETG00000024918's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSXETG00000024918's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSXETG00000024918	snrpd3	55	34.722	ENSXETG00000024933	lsm4	52	34.722
ENSXETG00000024918	snrpd3	55	33.803	ENSXETG00000027354	snrpd1	56	33.803

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSXETG00000024918	snrpd3	100	83.594	ENSG00000100028	SNRPD3	98	100.000	Homo_sapiens
ENSXETG00000024918	snrpd3	100	79.070	ENSAPOG00000007512	snrpd3l	100	78.295	Acanthochromis_polyacanthus
ENSXETG00000024918	snrpd3	100	83.594	ENSAMEG00000013935	SNRPD3	100	83.594	Ailuropoda_melanoleuca
ENSXETG00000024918	snrpd3	100	79.070	ENSACIG00000008871	snrpd3l	100	78.295	Amphilophus_citrinellus
ENSXETG00000024918	snrpd3	100	79.070	ENSAOCG00000022442	-	100	78.295	Amphiprion_ocellaris
ENSXETG00000024918	snrpd3	100	79.070	ENSAOCG00000008497	SNRPD3	100	78.295	Amphiprion_ocellaris
ENSXETG00000024918	snrpd3	100	79.070	ENSAOCG00000016743	snrpd3l	100	78.295	Amphiprion_ocellaris
ENSXETG00000024918	snrpd3	65	98.795	ENSAOCG00000016759	-	77	98.795	Amphiprion_ocellaris
ENSXETG00000024918	snrpd3	100	79.070	ENSAPEG00000006273	snrpd3l	100	78.295	Amphiprion_percula
ENSXETG00000024918	snrpd3	65	98.795	ENSAPEG00000006260	-	77	98.795	Amphiprion_percula
ENSXETG00000024918	snrpd3	100	79.070	ENSATEG00000020556	snrpd3l	91	78.295	Anabas_testudineus
ENSXETG00000024918	snrpd3	100	83.594	ENSAPLG00000008670	SNRPD3	100	83.594	Anas_platyrhynchos
ENSXETG00000024918	snrpd3	100	83.594	ENSANAG00000026106	SNRPD3	100	83.594	Aotus_nancymaae
ENSXETG00000024918	snrpd3	100	79.070	ENSACLG00000021295	snrpd3l	100	78.295	Astatotilapia_calliptera
ENSXETG00000024918	snrpd3	65	97.590	ENSAMXG00000038984	snrpd3l	100	80.000	Astyanax_mexicanus
ENSXETG00000024918	snrpd3	100	83.594	ENSBTAG00000021262	SNRPD3	100	83.594	Bos_taurus
ENSXETG00000024918	snrpd3	94	58.140	WBGene00004914	snr-1	76	62.500	Caenorhabditis_elegans
ENSXETG00000024918	snrpd3	100	83.594	ENSCJAG00000009630	SNRPD3	100	83.594	Callithrix_jacchus
ENSXETG00000024918	snrpd3	100	82.812	ENSCAFG00000017258	-	100	82.812	Canis_familiaris
ENSXETG00000024918	snrpd3	100	83.594	ENSCAFG00000013864	-	100	83.594	Canis_familiaris
ENSXETG00000024918	snrpd3	100	83.594	ENSCAFG00020007165	-	100	83.594	Canis_lupus_dingo
ENSXETG00000024918	snrpd3	100	83.594	ENSCHIG00000000057	SNRPD3	100	83.594	Capra_hircus
ENSXETG00000024918	snrpd3	100	83.594	ENSTSYG00000007649	SNRPD3	100	83.594	Carlito_syrichta
ENSXETG00000024918	snrpd3	100	83.594	ENSCAPG00000016432	-	100	83.594	Cavia_aperea
ENSXETG00000024918	snrpd3	100	83.594	ENSCPOG00000033102	-	100	83.594	Cavia_porcellus
ENSXETG00000024918	snrpd3	100	83.594	ENSCCAG00000035006	SNRPD3	100	83.594	Cebus_capucinus
ENSXETG00000024918	snrpd3	100	83.594	ENSCATG00000038878	SNRPD3	100	83.594	Cercocebus_atys
ENSXETG00000024918	snrpd3	100	83.594	ENSCLAG00000011403	SNRPD3	100	83.594	Chinchilla_lanigera
ENSXETG00000024918	snrpd3	100	83.594	ENSCSAG00000010694	SNRPD3	100	83.594	Chlorocebus_sabaeus
ENSXETG00000024918	snrpd3	100	83.594	ENSCPBG00000002065	SNRPD3	100	83.594	Chrysemys_picta_bellii
ENSXETG00000024918	snrpd3	68	80.460	ENSCSAVG00000004708	-	67	80.460	Ciona_savignyi
ENSXETG00000024918	snrpd3	100	83.594	ENSCANG00000032106	SNRPD3	100	83.594	Colobus_angolensis_palliatus
ENSXETG00000024918	snrpd3	100	83.594	ENSCGRG00001021990	Snrpd3	100	83.594	Cricetulus_griseus_chok1gshd
ENSXETG00000024918	snrpd3	100	83.594	ENSCGRG00000004280	Snrpd3	100	83.594	Cricetulus_griseus_crigri
ENSXETG00000024918	snrpd3	100	77.519	ENSCVAG00000001276	snrpd3l	100	81.395	Cyprinodon_variegatus
ENSXETG00000024918	snrpd3	100	79.231	ENSDARG00000076283	snrpd3l	100	80.769	Danio_rerio
ENSXETG00000024918	snrpd3	65	97.590	ENSDARG00000013800	snrpd3	100	80.620	Danio_rerio
ENSXETG00000024918	snrpd3	100	75.758	ENSDNOG00000018004	-	100	75.758	Dasypus_novemcinctus
ENSXETG00000024918	snrpd3	100	83.594	ENSDNOG00000047424	-	100	83.594	Dasypus_novemcinctus
ENSXETG00000024918	snrpd3	97	65.323	ENSDNOG00000042638	-	100	65.323	Dasypus_novemcinctus
ENSXETG00000024918	snrpd3	100	70.543	ENSDORG00000027706	-	100	70.312	Dipodomys_ordii
ENSXETG00000024918	snrpd3	88	75.000	ENSDORG00000002800	-	100	75.000	Dipodomys_ordii
ENSXETG00000024918	snrpd3	100	64.844	ENSDORG00000027169	-	100	64.844	Dipodomys_ordii
ENSXETG00000024918	snrpd3	65	89.157	FBgn0023167	SmD3	55	89.157	Drosophila_melanogaster
ENSXETG00000024918	snrpd3	100	83.594	ENSEASG00005000273	SNRPD3	100	83.594	Equus_asinus_asinus
ENSXETG00000024918	snrpd3	100	83.594	ENSECAG00000023316	SNRPD3	100	83.594	Equus_caballus
ENSXETG00000024918	snrpd3	100	80.469	ENSEEUG00000015518	SNRPD3	100	82.031	Erinaceus_europaeus
ENSXETG00000024918	snrpd3	100	77.519	ENSELUG00000001854	snrpd3	100	76.744	Esox_lucius
ENSXETG00000024918	snrpd3	100	78.295	ENSELUG00000010092	snrpd3l	100	82.171	Esox_lucius
ENSXETG00000024918	snrpd3	100	83.594	ENSFCAG00000001512	SNRPD3	100	83.594	Felis_catus
ENSXETG00000024918	snrpd3	100	83.594	ENSFALG00000007303	SNRPD3	100	83.594	Ficedula_albicollis
ENSXETG00000024918	snrpd3	100	83.594	ENSFDAG00000010772	SNRPD3	100	83.594	Fukomys_damarensis
ENSXETG00000024918	snrpd3	100	78.295	ENSFHEG00000010754	snrpd3l	100	82.171	Fundulus_heteroclitus
ENSXETG00000024918	snrpd3	100	78.462	ENSGMOG00000008469	snrpd3l	100	77.692	Gadus_morhua
ENSXETG00000024918	snrpd3	100	83.594	ENSGALG00000006596	SNRPD3	100	83.594	Gallus_gallus
ENSXETG00000024918	snrpd3	65	98.795	ENSGAFG00000006661	snrpd3l	64	98.795	Gambusia_affinis
ENSXETG00000024918	snrpd3	100	78.462	ENSGACG00000017533	snrpd3l	100	77.692	Gasterosteus_aculeatus
ENSXETG00000024918	snrpd3	100	83.594	ENSGAGG00000023325	SNRPD3	100	83.594	Gopherus_agassizii
ENSXETG00000024918	snrpd3	100	83.594	ENSGGOG00000015640	SNRPD3	100	83.594	Gorilla_gorilla
ENSXETG00000024918	snrpd3	100	79.070	ENSHBUG00000001332	snrpd3l	100	78.295	Haplochromis_burtoni
ENSXETG00000024918	snrpd3	99	80.315	ENSHGLG00000009844	-	99	80.315	Heterocephalus_glaber_female
ENSXETG00000024918	snrpd3	100	83.594	ENSHGLG00000016496	SNRPD3	100	83.594	Heterocephalus_glaber_female
ENSXETG00000024918	snrpd3	100	83.594	ENSHGLG00100019304	SNRPD3	100	83.594	Heterocephalus_glaber_male
ENSXETG00000024918	snrpd3	99	80.315	ENSHGLG00100011326	-	99	80.315	Heterocephalus_glaber_male
ENSXETG00000024918	snrpd3	100	78.295	ENSHCOG00000014396	snrpd3l	100	77.519	Hippocampus_comes
ENSXETG00000024918	snrpd3	100	80.451	ENSIPUG00000003083	snrpd3	100	81.955	Ictalurus_punctatus
ENSXETG00000024918	snrpd3	100	83.594	ENSSTOG00000025674	SNRPD3	100	83.594	Ictidomys_tridecemlineatus
ENSXETG00000024918	snrpd3	100	83.594	ENSJJAG00000013303	Snrpd3	100	83.594	Jaculus_jaculus
ENSXETG00000024918	snrpd3	100	78.295	ENSKMAG00000012493	snrpd3l	100	82.171	Kryptolebias_marmoratus
ENSXETG00000024918	snrpd3	100	79.070	ENSLBEG00000003202	snrpd3l	100	78.295	Labrus_bergylta
ENSXETG00000024918	snrpd3	100	82.812	ENSLACG00000015192	SNRPD3	100	82.812	Latimeria_chalumnae
ENSXETG00000024918	snrpd3	100	79.070	ENSLOCG00000006978	snrpd3	100	78.295	Lepisosteus_oculatus
ENSXETG00000024918	snrpd3	100	83.594	ENSLAFG00000028180	SNRPD3	100	83.594	Loxodonta_africana
ENSXETG00000024918	snrpd3	100	83.594	ENSMFAG00000033628	SNRPD3	100	83.594	Macaca_fascicularis
ENSXETG00000024918	snrpd3	100	83.594	ENSMMUG00000000264	SNRPD3	100	83.594	Macaca_mulatta
ENSXETG00000024918	snrpd3	100	83.594	ENSMNEG00000020857	SNRPD3	100	83.594	Macaca_nemestrina
ENSXETG00000024918	snrpd3	100	83.594	ENSMLEG00000037548	SNRPD3	100	83.594	Mandrillus_leucophaeus
ENSXETG00000024918	snrpd3	100	79.070	ENSMZEG00005017664	snrpd3l	100	78.295	Maylandia_zebra
ENSXETG00000024918	snrpd3	100	83.594	ENSMAUG00000021393	Snrpd3	100	83.594	Mesocricetus_auratus
ENSXETG00000024918	snrpd3	100	83.594	ENSMICG00000034782	SNRPD3	100	83.594	Microcebus_murinus
ENSXETG00000024918	snrpd3	100	83.594	ENSMOCG00000009361	Snrpd3	100	83.594	Microtus_ochrogaster
ENSXETG00000024918	snrpd3	65	98.795	ENSMMOG00000020985	snrpd3l	52	98.795	Mola_mola
ENSXETG00000024918	snrpd3	100	83.594	ENSMODG00000004024	SNRPD3	100	83.594	Monodelphis_domestica
ENSXETG00000024918	snrpd3	100	79.070	ENSMALG00000013334	snrpd3l	100	78.295	Monopterus_albus
ENSXETG00000024918	snrpd3	100	83.594	MGP_CAROLIEiJ_G0015441	Snrpd3	100	83.594	Mus_caroli
ENSXETG00000024918	snrpd3	100	83.594	ENSMUSG00000020180	Snrpd3	100	83.594	Mus_musculus
ENSXETG00000024918	snrpd3	100	83.594	MGP_PahariEiJ_G0030857	Snrpd3	100	83.594	Mus_pahari
ENSXETG00000024918	snrpd3	100	83.594	MGP_SPRETEiJ_G0016254	Snrpd3	100	83.594	Mus_spretus
ENSXETG00000024918	snrpd3	100	83.594	ENSMPUG00000002889	SNRPD3	100	83.594	Mustela_putorius_furo
ENSXETG00000024918	snrpd3	100	83.594	ENSMLUG00000009838	SNRPD3	100	83.594	Myotis_lucifugus
ENSXETG00000024918	snrpd3	100	83.594	ENSNGAG00000010328	Snrpd3	100	83.594	Nannospalax_galili
ENSXETG00000024918	snrpd3	100	79.070	ENSNBRG00000020307	snrpd3l	100	78.295	Neolamprologus_brichardi
ENSXETG00000024918	snrpd3	100	83.594	ENSNLEG00000035757	SNRPD3	100	83.594	Nomascus_leucogenys
ENSXETG00000024918	snrpd3	100	83.594	ENSMEUG00000003772	SNRPD3	100	83.594	Notamacropus_eugenii
ENSXETG00000024918	snrpd3	100	83.594	ENSOPRG00000005763	SNRPD3	100	83.594	Ochotona_princeps
ENSXETG00000024918	snrpd3	100	83.594	ENSODEG00000008064	-	100	83.594	Octodon_degus
ENSXETG00000024918	snrpd3	100	82.812	ENSODEG00000019354	-	100	82.812	Octodon_degus
ENSXETG00000024918	snrpd3	100	80.469	ENSODEG00000020162	-	100	80.469	Octodon_degus
ENSXETG00000024918	snrpd3	100	79.070	ENSONIG00000003828	snrpd3l	100	78.295	Oreochromis_niloticus
ENSXETG00000024918	snrpd3	100	83.594	ENSOANG00000002463	SNRPD3	100	83.594	Ornithorhynchus_anatinus
ENSXETG00000024918	snrpd3	100	83.594	ENSOCUG00000004845	SNRPD3	100	83.594	Oryctolagus_cuniculus
ENSXETG00000024918	snrpd3	100	79.070	ENSORLG00000010586	snrpd3l	100	78.295	Oryzias_latipes
ENSXETG00000024918	snrpd3	100	79.070	ENSORLG00020011769	snrpd3l	100	78.295	Oryzias_latipes_hni
ENSXETG00000024918	snrpd3	100	79.070	ENSORLG00015022940	snrpd3l	100	78.295	Oryzias_latipes_hsok
ENSXETG00000024918	snrpd3	100	78.295	ENSOMEG00000022734	snrpd3l	100	82.171	Oryzias_melastigma
ENSXETG00000024918	snrpd3	100	83.594	ENSOGAG00000012708	SNRPD3	100	83.594	Otolemur_garnettii
ENSXETG00000024918	snrpd3	100	83.594	ENSOARG00000013984	SNRPD3	100	83.594	Ovis_aries
ENSXETG00000024918	snrpd3	100	83.594	ENSPPAG00000039191	SNRPD3	100	83.594	Pan_paniscus
ENSXETG00000024918	snrpd3	100	83.594	ENSPPRG00000001470	SNRPD3	100	83.594	Panthera_pardus
ENSXETG00000024918	snrpd3	100	83.594	ENSPTIG00000016610	SNRPD3	100	83.594	Panthera_tigris_altaica
ENSXETG00000024918	snrpd3	100	83.594	ENSPTRG00000014176	SNRPD3	100	83.594	Pan_troglodytes
ENSXETG00000024918	snrpd3	100	83.594	ENSPANG00000009279	SNRPD3	100	83.594	Papio_anubis
ENSXETG00000024918	snrpd3	100	76.744	ENSPKIG00000006412	snrpd3l	100	80.620	Paramormyrops_kingsleyae
ENSXETG00000024918	snrpd3	100	82.031	ENSPSIG00000010022	-	100	82.031	Pelodiscus_sinensis
ENSXETG00000024918	snrpd3	65	98.795	ENSPMGG00000004486	snrpd3l	67	98.795	Periophthalmus_magnuspinnatus
ENSXETG00000024918	snrpd3	100	83.594	ENSPCIG00000010910	SNRPD3	84	83.594	Phascolarctos_cinereus
ENSXETG00000024918	snrpd3	100	78.295	ENSPFOG00000019673	snrpd3l	100	82.171	Poecilia_formosa
ENSXETG00000024918	snrpd3	100	78.295	ENSPLAG00000023249	snrpd3l	100	82.171	Poecilia_latipinna
ENSXETG00000024918	snrpd3	100	78.295	ENSPMEG00000008482	snrpd3l	100	82.171	Poecilia_mexicana
ENSXETG00000024918	snrpd3	65	98.795	ENSPREG00000007532	snrpd3l	68	98.795	Poecilia_reticulata
ENSXETG00000024918	snrpd3	100	83.594	ENSPPYG00000011648	SNRPD3	100	83.594	Pongo_abelii
ENSXETG00000024918	snrpd3	100	83.594	ENSPCAG00000002065	SNRPD3	100	83.594	Procavia_capensis
ENSXETG00000024918	snrpd3	100	83.594	ENSPCOG00000011842	SNRPD3	100	83.594	Propithecus_coquereli
ENSXETG00000024918	snrpd3	100	82.812	ENSPVAG00000011405	SNRPD3	100	82.812	Pteropus_vampyrus
ENSXETG00000024918	snrpd3	100	79.070	ENSPNYG00000013344	snrpd3l	100	78.295	Pundamilia_nyererei
ENSXETG00000024918	snrpd3	65	96.386	ENSPNAG00000008683	snrpd3l	100	79.231	Pygocentrus_nattereri
ENSXETG00000024918	snrpd3	100	76.744	ENSPNAG00000010547	snrpd3	100	80.620	Pygocentrus_nattereri
ENSXETG00000024918	snrpd3	100	83.594	ENSRNOG00000050410	Snrpd3	100	83.594	Rattus_norvegicus
ENSXETG00000024918	snrpd3	100	83.594	ENSRBIG00000029017	SNRPD3	100	83.594	Rhinopithecus_bieti
ENSXETG00000024918	snrpd3	100	83.594	ENSRROG00000031152	SNRPD3	100	83.594	Rhinopithecus_roxellana
ENSXETG00000024918	snrpd3	63	50.000	YLR147C	SMD3	79	50.000	Saccharomyces_cerevisiae
ENSXETG00000024918	snrpd3	100	78.030	ENSSFOG00015014180	snrpd3l	100	77.273	Scleropages_formosus
ENSXETG00000024918	snrpd3	100	78.788	ENSSFOG00015007002	snrpd3l	100	82.576	Scleropages_formosus
ENSXETG00000024918	snrpd3	100	79.070	ENSSMAG00000019307	snrpd3l	100	78.295	Scophthalmus_maximus
ENSXETG00000024918	snrpd3	100	79.070	ENSSDUG00000006870	snrpd3l	100	78.295	Seriola_dumerili
ENSXETG00000024918	snrpd3	100	79.070	ENSSLDG00000022664	snrpd3l	100	78.295	Seriola_lalandi_dorsalis
ENSXETG00000024918	snrpd3	100	83.594	ENSSARG00000002357	SNRPD3	100	83.594	Sorex_araneus
ENSXETG00000024918	snrpd3	100	82.812	ENSSPUG00000014285	SNRPD3	100	82.812	Sphenodon_punctatus
ENSXETG00000024918	snrpd3	100	83.594	ENSSSCG00000010058	SNRPD3	100	83.594	Sus_scrofa
ENSXETG00000024918	snrpd3	100	83.594	ENSTGUG00000010079	SNRPD3	100	83.594	Taeniopygia_guttata
ENSXETG00000024918	snrpd3	65	98.795	ENSTRUG00000023976	snrpd3l	70	98.795	Takifugu_rubripes
ENSXETG00000024918	snrpd3	100	78.295	ENSTNIG00000005323	snrpd3l	100	82.171	Tetraodon_nigroviridis
ENSXETG00000024918	snrpd3	100	83.594	ENSTBEG00000014334	SNRPD3	100	83.594	Tupaia_belangeri
ENSXETG00000024918	snrpd3	100	83.594	ENSTTRG00000006022	SNRPD3	100	83.594	Tursiops_truncatus
ENSXETG00000024918	snrpd3	100	83.594	ENSUAMG00000010767	SNRPD3	100	83.594	Ursus_americanus
ENSXETG00000024918	snrpd3	100	83.594	ENSUMAG00000001670	SNRPD3	100	83.594	Ursus_maritimus
ENSXETG00000024918	snrpd3	100	83.594	ENSVPAG00000000241	SNRPD3	100	83.594	Vicugna_pacos
ENSXETG00000024918	snrpd3	100	78.295	ENSXCOG00000004795	snrpd3l	100	82.171	Xiphophorus_couchianus
ENSXETG00000024918	snrpd3	100	78.295	ENSXMAG00000001133	snrpd3l	100	82.171	Xiphophorus_maculatus