EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Orthologs

Description

Ensembl ID: ENSXETG00000024943 (Gene tree)
Gene ID: -
Gene Symbol: sf3a2
Alias: -
Full Name: splicing factor 3a subunit 2
Gene Type: protein_coding
Species: Xenopus_tropicalis
Status: putative
Strand: Minus strand
Length: 7916 bases
Position: chrGL172963.1:283533-291448
Accession: XB-GENE-492856
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSXETP00000053596	zf-met	PF12874.7	5.9e-07	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSXETT00000053596	-	1666	XM_012958846	ENSXETP00000053596	413 (aa)	XP_012814300	F7AY00

Gene Model

Click here to download ENSXETG00000024943's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSXETG00000024943's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSXETG00000024943	sf3a2	54	96.429	ENSG00000104897	SF3A2	100	97.037	Homo_sapiens
ENSXETG00000024943	sf3a2	58	90.041	ENSAPOG00000003916	sf3a2	82	89.344	Acanthochromis_polyacanthus
ENSXETG00000024943	sf3a2	54	96.429	ENSAMEG00000005469	SF3A2	53	93.443	Ailuropoda_melanoleuca
ENSXETG00000024943	sf3a2	58	90.496	ENSACIG00000018153	sf3a2	81	90.456	Amphilophus_citrinellus
ENSXETG00000024943	sf3a2	58	90.041	ENSAOCG00000015960	sf3a2	82	89.344	Amphiprion_ocellaris
ENSXETG00000024943	sf3a2	58	90.041	ENSAPEG00000012336	sf3a2	82	89.344	Amphiprion_percula
ENSXETG00000024943	sf3a2	58	90.456	ENSATEG00000015449	sf3a2	82	89.754	Anabas_testudineus
ENSXETG00000024943	sf3a2	63	86.207	ENSACLG00000002356	sf3a2	81	90.417	Astatotilapia_calliptera
ENSXETG00000024943	sf3a2	74	79.085	ENSAMXG00000032428	sf3a2	80	90.574	Astyanax_mexicanus
ENSXETG00000024943	sf3a2	54	96.429	ENSBTAG00000025452	SF3A2	51	93.443	Bos_taurus
ENSXETG00000024943	sf3a2	54	78.281	WBGene00008683	repo-1	99	78.281	Caenorhabditis_elegans
ENSXETG00000024943	sf3a2	54	96.429	ENSCJAG00000013206	-	53	93.443	Callithrix_jacchus
ENSXETG00000024943	sf3a2	54	96.429	ENSCAFG00000019414	SF3A2	51	93.443	Canis_familiaris
ENSXETG00000024943	sf3a2	54	96.429	ENSCAFG00020018153	SF3A2	51	93.443	Canis_lupus_dingo
ENSXETG00000024943	sf3a2	54	96.429	ENSCHIG00000018323	SF3A2	51	93.443	Capra_hircus
ENSXETG00000024943	sf3a2	54	96.429	ENSCPOG00000032868	SF3A2	54	93.443	Cavia_porcellus
ENSXETG00000024943	sf3a2	54	96.429	ENSCCAG00000009812	SF3A2	87	97.297	Cebus_capucinus
ENSXETG00000024943	sf3a2	54	96.429	ENSCATG00000038453	SF3A2	53	93.443	Cercocebus_atys
ENSXETG00000024943	sf3a2	54	96.429	ENSCLAG00000008987	SF3A2	54	93.443	Chinchilla_lanigera
ENSXETG00000024943	sf3a2	55	95.133	ENSCPBG00000018569	SF3A2	78	92.245	Chrysemys_picta_bellii
ENSXETG00000024943	sf3a2	53	84.862	ENSCING00000003319	zf(matrin)-2	62	85.581	Ciona_intestinalis
ENSXETG00000024943	sf3a2	53	84.404	ENSCSAVG00000007862	-	64	81.172	Ciona_savignyi
ENSXETG00000024943	sf3a2	54	96.429	ENSCANG00000024451	SF3A2	53	93.443	Colobus_angolensis_palliatus
ENSXETG00000024943	sf3a2	54	96.429	ENSCGRG00001001802	Sf3a2	50	93.443	Cricetulus_griseus_chok1gshd
ENSXETG00000024943	sf3a2	54	96.429	ENSCGRG00000011089	Sf3a2	94	97.802	Cricetulus_griseus_crigri
ENSXETG00000024943	sf3a2	64	85.606	ENSCSEG00000014308	sf3a2	84	90.417	Cynoglossus_semilaevis
ENSXETG00000024943	sf3a2	56	91.342	ENSCVAG00000021349	sf3a2	79	91.342	Cyprinodon_variegatus
ENSXETG00000024943	sf3a2	70	79.931	ENSDARG00000021107	sf3a2	87	90.164	Danio_rerio
ENSXETG00000024943	sf3a2	54	95.982	ENSDORG00000014445	Sf3a2	53	93.033	Dipodomys_ordii
ENSXETG00000024943	sf3a2	52	84.722	FBgn0036314	Sf3a2	88	80.169	Drosophila_melanogaster
ENSXETG00000024943	sf3a2	54	96.429	ENSEASG00005021972	SF3A2	53	93.443	Equus_asinus_asinus
ENSXETG00000024943	sf3a2	58	90.041	ENSELUG00000008471	sf3a2	79	89.344	Esox_lucius
ENSXETG00000024943	sf3a2	54	95.982	ENSFCAG00000030476	SF3A2	56	93.033	Felis_catus
ENSXETG00000024943	sf3a2	58	90.417	ENSFHEG00000002392	sf3a2	82	89.344	Fundulus_heteroclitus
ENSXETG00000024943	sf3a2	58	89.627	ENSGMOG00000012186	sf3a2	81	88.934	Gadus_morhua
ENSXETG00000024943	sf3a2	52	97.685	ENSGALG00000021679	SF3A2	78	93.061	Gallus_gallus
ENSXETG00000024943	sf3a2	53	95.392	ENSGAFG00000008478	sf3a2	82	88.934	Gambusia_affinis
ENSXETG00000024943	sf3a2	59	89.796	ENSGACG00000015255	sf3a2	83	89.754	Gasterosteus_aculeatus
ENSXETG00000024943	sf3a2	54	96.429	ENSGGOG00000006613	SF3A2	53	93.443	Gorilla_gorilla
ENSXETG00000024943	sf3a2	63	86.207	ENSHBUG00000021796	sf3a2	81	90.417	Haplochromis_burtoni
ENSXETG00000024943	sf3a2	54	96.429	ENSHGLG00000015102	SF3A2	88	97.814	Heterocephalus_glaber_female
ENSXETG00000024943	sf3a2	58	94.191	ENSHGLG00100000418	SF3A2	88	97.814	Heterocephalus_glaber_male
ENSXETG00000024943	sf3a2	65	85.502	ENSHCOG00000001223	sf3a2	81	91.489	Hippocampus_comes
ENSXETG00000024943	sf3a2	59	89.754	ENSIPUG00000019071	sf3a2	81	89.754	Ictalurus_punctatus
ENSXETG00000024943	sf3a2	54	96.429	ENSSTOG00000007495	SF3A2	90	90.164	Ictidomys_tridecemlineatus
ENSXETG00000024943	sf3a2	54	96.875	ENSJJAG00000010635	Sf3a2	96	96.757	Jaculus_jaculus
ENSXETG00000024943	sf3a2	57	91.064	ENSKMAG00000006295	sf3a2	79	91.064	Kryptolebias_marmoratus
ENSXETG00000024943	sf3a2	58	90.000	ENSLBEG00000000677	sf3a2	81	90.000	Labrus_bergylta
ENSXETG00000024943	sf3a2	52	96.759	ENSLACG00000008744	SF3A2	78	92.653	Latimeria_chalumnae
ENSXETG00000024943	sf3a2	56	91.139	ENSLOCG00000005835	sf3a2	78	89.837	Lepisosteus_oculatus
ENSXETG00000024943	sf3a2	54	96.429	ENSMFAG00000002638	SF3A2	53	93.443	Macaca_fascicularis
ENSXETG00000024943	sf3a2	54	96.429	ENSMMUG00000010111	SF3A2	53	93.443	Macaca_mulatta
ENSXETG00000024943	sf3a2	58	90.041	ENSMAMG00000009881	sf3a2	82	89.344	Mastacembelus_armatus
ENSXETG00000024943	sf3a2	63	86.207	ENSMZEG00005025609	sf3a2	81	90.417	Maylandia_zebra
ENSXETG00000024943	sf3a2	52	97.685	ENSMGAG00000001950	SF3A2	78	93.061	Meleagris_gallopavo
ENSXETG00000024943	sf3a2	54	96.429	ENSMICG00000015443	SF3A2	53	93.443	Microcebus_murinus
ENSXETG00000024943	sf3a2	54	96.429	ENSMOCG00000007216	Sf3a2	53	93.443	Microtus_ochrogaster
ENSXETG00000024943	sf3a2	67	77.061	ENSMMOG00000010657	sf3a2	86	81.818	Mola_mola
ENSXETG00000024943	sf3a2	58	89.627	ENSMALG00000020442	sf3a2	82	88.934	Monopterus_albus
ENSXETG00000024943	sf3a2	54	96.429	MGP_CAROLIEiJ_G0015602	-	94	97.802	Mus_caroli
ENSXETG00000024943	sf3a2	54	96.429	ENSMUSG00000020211	Sf3a2	94	97.802	Mus_musculus
ENSXETG00000024943	sf3a2	54	96.429	MGP_PahariEiJ_G0031015	-	94	97.802	Mus_pahari
ENSXETG00000024943	sf3a2	54	96.429	MGP_SPRETEiJ_G0016420	-	94	97.802	Mus_spretus
ENSXETG00000024943	sf3a2	54	95.536	ENSMPUG00000006956	SF3A2	53	92.623	Mustela_putorius_furo
ENSXETG00000024943	sf3a2	58	90.417	ENSNBRG00000019872	sf3a2	81	90.417	Neolamprologus_brichardi
ENSXETG00000024943	sf3a2	58	90.000	ENSONIG00000010198	sf3a2	81	90.000	Oreochromis_niloticus
ENSXETG00000024943	sf3a2	50	96.585	ENSOANG00000013649	-	98	96.585	Ornithorhynchus_anatinus
ENSXETG00000024943	sf3a2	65	84.133	ENSORLG00000015301	sf3a2	82	89.212	Oryzias_latipes
ENSXETG00000024943	sf3a2	65	83.764	ENSORLG00020017235	sf3a2	82	88.797	Oryzias_latipes_hni
ENSXETG00000024943	sf3a2	58	88.797	ENSORLG00015017116	sf3a2	82	88.797	Oryzias_latipes_hsok
ENSXETG00000024943	sf3a2	58	89.627	ENSOMEG00000020860	sf3a2	82	89.627	Oryzias_melastigma
ENSXETG00000024943	sf3a2	54	96.429	ENSOGAG00000033389	SF3A2	53	93.443	Otolemur_garnettii
ENSXETG00000024943	sf3a2	54	96.429	ENSOARG00000014357	SF3A2	60	93.443	Ovis_aries
ENSXETG00000024943	sf3a2	54	80.804	ENSPPAG00000037864	-	51	79.098	Pan_paniscus
ENSXETG00000024943	sf3a2	54	95.982	ENSPPRG00000007798	SF3A2	52	93.033	Panthera_pardus
ENSXETG00000024943	sf3a2	54	96.429	ENSPTRG00000010227	SF3A2	53	93.443	Pan_troglodytes
ENSXETG00000024943	sf3a2	54	96.429	ENSPANG00000007949	SF3A2	53	93.443	Papio_anubis
ENSXETG00000024943	sf3a2	58	91.286	ENSPKIG00000009487	sf3a2	77	90.574	Paramormyrops_kingsleyae
ENSXETG00000024943	sf3a2	55	94.298	ENSPSIG00000010839	SF3A2	78	91.093	Pelodiscus_sinensis
ENSXETG00000024943	sf3a2	52	95.370	ENSPMGG00000017249	sf3a2	90	86.266	Periophthalmus_magnuspinnatus
ENSXETG00000024943	sf3a2	54	96.429	ENSPEMG00000021288	Sf3a2	53	93.443	Peromyscus_maniculatus_bairdii
ENSXETG00000024943	sf3a2	53	95.392	ENSPFOG00000015945	sf3a2	83	89.344	Poecilia_formosa
ENSXETG00000024943	sf3a2	53	95.392	ENSPLAG00000010052	sf3a2	83	89.344	Poecilia_latipinna
ENSXETG00000024943	sf3a2	53	95.392	ENSPMEG00000000184	sf3a2	83	89.344	Poecilia_mexicana
ENSXETG00000024943	sf3a2	53	95.392	ENSPREG00000017808	sf3a2	83	89.344	Poecilia_reticulata
ENSXETG00000024943	sf3a2	54	96.429	ENSPCOG00000020295	SF3A2	67	82.060	Propithecus_coquereli
ENSXETG00000024943	sf3a2	63	86.207	ENSPNYG00000006928	sf3a2	81	90.417	Pundamilia_nyererei
ENSXETG00000024943	sf3a2	58	91.286	ENSPNAG00000027582	sf3a2	80	90.574	Pygocentrus_nattereri
ENSXETG00000024943	sf3a2	54	96.429	ENSRROG00000034440	SF3A2	52	93.443	Rhinopithecus_roxellana
ENSXETG00000024943	sf3a2	100	65.880	ENSSBOG00000026071	SF3A2	100	65.245	Saimiri_boliviensis_boliviensis
ENSXETG00000024943	sf3a2	60	92.713	ENSSHAG00000011677	-	99	93.033	Sarcophilus_harrisii
ENSXETG00000024943	sf3a2	62	88.417	ENSSFOG00015010920	sf3a2	69	90.574	Scleropages_formosus
ENSXETG00000024943	sf3a2	58	90.417	ENSSMAG00000002629	sf3a2	83	90.417	Scophthalmus_maximus
ENSXETG00000024943	sf3a2	58	90.456	ENSSDUG00000015810	sf3a2	83	89.754	Seriola_dumerili
ENSXETG00000024943	sf3a2	58	90.456	ENSSLDG00000010874	sf3a2	83	89.754	Seriola_lalandi_dorsalis
ENSXETG00000024943	sf3a2	58	88.618	ENSSPAG00000004960	sf3a2	82	89.796	Stegastes_partitus
ENSXETG00000024943	sf3a2	54	95.536	ENSSSCG00000039757	SF3A2	53	92.623	Sus_scrofa
ENSXETG00000024943	sf3a2	50	97.561	ENSTGUG00000000305	SF3A2	100	97.561	Taeniopygia_guttata
ENSXETG00000024943	sf3a2	58	88.843	ENSTRUG00000009045	sf3a2	84	88.477	Takifugu_rubripes
ENSXETG00000024943	sf3a2	58	88.843	ENSTNIG00000015318	sf3a2	81	91.139	Tetraodon_nigroviridis
ENSXETG00000024943	sf3a2	54	79.911	ENSTTRG00000010177	-	53	78.279	Tursiops_truncatus
ENSXETG00000024943	sf3a2	54	96.429	ENSVVUG00000002578	SF3A2	51	93.443	Vulpes_vulpes
ENSXETG00000024943	sf3a2	53	95.392	ENSXCOG00000008222	sf3a2	83	88.934	Xiphophorus_couchianus
ENSXETG00000024943	sf3a2	53	95.392	ENSXMAG00000029068	sf3a2	83	88.934	Xiphophorus_maculatus