EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Orthologs

Description

Ensembl ID: ENSXETG00000025027 (Gene tree)
Gene ID: -
Gene Symbol: rnpc3
Alias: -
Full Name: RNA binding region (RNP1%2C RRM) containing 3
Gene Type: protein_coding
Species: Xenopus_tropicalis
Status: putative
Strand: Plus strand
Length: 11326 bases
Position: chrGL173051.1:370070-381395
Accession: XB-GENE-920577
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSXETP00000053720	RRM_1	PF00076.22	3.6e-13	1	1
ENSXETP00000063574	RRM_1	PF00076.22	3.7e-13	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSXETT00000053720	-	1587	-	ENSXETP00000053720	528 (aa)	-	F7AX68
ENSXETT00000064052	-	1548	-	ENSXETP00000063574	515 (aa)	-	F7E8Q4

Gene Model

Click here to download ENSXETG00000025027's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSXETG00000025027's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSXETG00000025027	rnpc3	96	52.104	ENSG00000185946	RNPC3	98	53.631	Homo_sapiens
ENSXETG00000025027	rnpc3	98	43.750	ENSAPOG00000017371	rnpc3	98	44.597	Acanthochromis_polyacanthus
ENSXETG00000025027	rnpc3	96	52.400	ENSAMEG00000001694	RNPC3	94	52.400	Ailuropoda_melanoleuca
ENSXETG00000025027	rnpc3	96	42.285	ENSACIG00000021043	rnpc3	97	43.738	Amphilophus_citrinellus
ENSXETG00000025027	rnpc3	96	44.841	ENSAOCG00000014052	rnpc3	95	45.365	Amphiprion_ocellaris
ENSXETG00000025027	rnpc3	98	44.639	ENSAPEG00000008739	rnpc3	96	45.155	Amphiprion_percula
ENSXETG00000025027	rnpc3	96	44.204	ENSATEG00000021263	rnpc3	97	44.902	Anabas_testudineus
ENSXETG00000025027	rnpc3	89	50.104	ENSAPLG00000015605	RNPC3	100	52.442	Anas_platyrhynchos
ENSXETG00000025027	rnpc3	95	49.901	ENSACAG00000002029	RNPC3	95	51.837	Anolis_carolinensis
ENSXETG00000025027	rnpc3	96	51.503	ENSANAG00000019950	RNPC3	95	51.503	Aotus_nancymaae
ENSXETG00000025027	rnpc3	96	44.088	ENSACLG00000014702	rnpc3	96	44.821	Astatotilapia_calliptera
ENSXETG00000025027	rnpc3	97	43.301	ENSAMXG00000033372	rnpc3	97	44.922	Astyanax_mexicanus
ENSXETG00000025027	rnpc3	97	52.200	ENSBTAG00000019091	RNPC3	95	52.200	Bos_taurus
ENSXETG00000025027	rnpc3	96	51.406	ENSCJAG00000035686	RNPC3	95	51.904	Callithrix_jacchus
ENSXETG00000025027	rnpc3	97	52.600	ENSCAFG00000019972	RNPC3	95	52.600	Canis_familiaris
ENSXETG00000025027	rnpc3	97	52.600	ENSCAFG00020011300	RNPC3	95	52.600	Canis_lupus_dingo
ENSXETG00000025027	rnpc3	97	50.881	ENSCHIG00000020361	RNPC3	95	51.772	Capra_hircus
ENSXETG00000025027	rnpc3	97	52.096	ENSTSYG00000030256	RNPC3	95	51.703	Carlito_syrichta
ENSXETG00000025027	rnpc3	84	48.853	ENSCAPG00000013600	RNPC3	97	48.853	Cavia_aperea
ENSXETG00000025027	rnpc3	99	50.977	ENSCPOG00000031638	RNPC3	97	50.977	Cavia_porcellus
ENSXETG00000025027	rnpc3	96	51.303	ENSCCAG00000024301	RNPC3	95	51.303	Cebus_capucinus
ENSXETG00000025027	rnpc3	95	52.857	ENSCATG00000002086	RNPC3	93	52.857	Cercocebus_atys
ENSXETG00000025027	rnpc3	83	42.263	ENSCATG00000035930	-	88	43.602	Cercocebus_atys
ENSXETG00000025027	rnpc3	99	49.515	ENSCLAG00000005169	RNPC3	98	49.231	Chinchilla_lanigera
ENSXETG00000025027	rnpc3	95	52.857	ENSCSAG00000001519	RNPC3	93	52.857	Chlorocebus_sabaeus
ENSXETG00000025027	rnpc3	97	49.225	ENSCPBG00000028311	RNPC3	95	50.988	Chrysemys_picta_bellii
ENSXETG00000025027	rnpc3	96	32.755	ENSCING00000021276	-	100	33.988	Ciona_intestinalis
ENSXETG00000025027	rnpc3	94	34.343	ENSCSAVG00000002800	-	73	60.331	Ciona_savignyi
ENSXETG00000025027	rnpc3	95	52.449	ENSCANG00000031444	RNPC3	93	52.449	Colobus_angolensis_palliatus
ENSXETG00000025027	rnpc3	99	50.870	ENSCGRG00001019276	Rnpc3	98	50.291	Cricetulus_griseus_chok1gshd
ENSXETG00000025027	rnpc3	89	51.522	ENSCGRG00000000053	Rnpc3	99	50.873	Cricetulus_griseus_crigri
ENSXETG00000025027	rnpc3	96	43.976	ENSCSEG00000013475	rnpc3	96	44.556	Cynoglossus_semilaevis
ENSXETG00000025027	rnpc3	96	44.024	ENSCVAG00000002645	rnpc3	96	44.752	Cyprinodon_variegatus
ENSXETG00000025027	rnpc3	97	44.487	ENSDARG00000011247	rnpc3	92	62.791	Danio_rerio
ENSXETG00000025027	rnpc3	97	53.106	ENSDNOG00000044555	-	95	53.106	Dasypus_novemcinctus
ENSXETG00000025027	rnpc3	96	52.811	ENSDNOG00000047498	-	95	53.307	Dasypus_novemcinctus
ENSXETG00000025027	rnpc3	99	50.781	ENSDORG00000027343	Rnpc3	97	50.781	Dipodomys_ordii
ENSXETG00000025027	rnpc3	97	41.098	ENSEBUG00000002068	rnpc3	98	41.905	Eptatretus_burgeri
ENSXETG00000025027	rnpc3	97	51.800	ENSEASG00005015957	RNPC3	95	51.800	Equus_asinus_asinus
ENSXETG00000025027	rnpc3	97	52.000	ENSECAG00000021148	RNPC3	95	52.000	Equus_caballus
ENSXETG00000025027	rnpc3	95	44.334	ENSELUG00000002264	rnpc3	95	45.455	Esox_lucius
ENSXETG00000025027	rnpc3	98	51.581	ENSFCAG00000024312	RNPC3	96	51.581	Felis_catus
ENSXETG00000025027	rnpc3	89	50.947	ENSFALG00000002580	RNPC3	100	59.330	Ficedula_albicollis
ENSXETG00000025027	rnpc3	99	50.781	ENSFDAG00000019948	RNPC3	97	50.781	Fukomys_damarensis
ENSXETG00000025027	rnpc3	95	38.600	ENSFHEG00000020647	rnpc3	95	41.962	Fundulus_heteroclitus
ENSXETG00000025027	rnpc3	95	45.473	ENSGMOG00000019213	rnpc3	94	47.107	Gadus_morhua
ENSXETG00000025027	rnpc3	97	52.485	ENSGALG00000005162	RNPC3	89	52.475	Gallus_gallus
ENSXETG00000025027	rnpc3	97	44.158	ENSGAFG00000017236	rnpc3	98	44.291	Gambusia_affinis
ENSXETG00000025027	rnpc3	96	43.200	ENSGACG00000002048	rnpc3	96	44.246	Gasterosteus_aculeatus
ENSXETG00000025027	rnpc3	97	48.948	ENSGAGG00000008438	RNPC3	95	50.298	Gopherus_agassizii
ENSXETG00000025027	rnpc3	96	43.574	ENSGGOG00000026201	-	94	43.802	Gorilla_gorilla
ENSXETG00000025027	rnpc3	72	40.584	ENSHBUG00000015966	rnpc3	74	43.370	Haplochromis_burtoni
ENSXETG00000025027	rnpc3	99	51.367	ENSHGLG00000001708	RNPC3	97	51.367	Heterocephalus_glaber_female
ENSXETG00000025027	rnpc3	99	51.367	ENSHGLG00100003005	RNPC3	97	51.367	Heterocephalus_glaber_male
ENSXETG00000025027	rnpc3	96	43.713	ENSHCOG00000017135	rnpc3	97	45.168	Hippocampus_comes
ENSXETG00000025027	rnpc3	97	43.678	ENSIPUG00000002916	rnpc3	97	46.245	Ictalurus_punctatus
ENSXETG00000025027	rnpc3	99	52.250	ENSSTOG00000025020	RNPC3	97	52.250	Ictidomys_tridecemlineatus
ENSXETG00000025027	rnpc3	96	51.400	ENSJJAG00000010203	Rnpc3	98	51.267	Jaculus_jaculus
ENSXETG00000025027	rnpc3	96	43.359	ENSKMAG00000017358	rnpc3	97	45.309	Kryptolebias_marmoratus
ENSXETG00000025027	rnpc3	96	44.158	ENSLBEG00000024901	rnpc3	95	44.576	Labrus_bergylta
ENSXETG00000025027	rnpc3	97	47.500	ENSLACG00000005720	RNPC3	91	50.391	Latimeria_chalumnae
ENSXETG00000025027	rnpc3	97	48.814	ENSLOCG00000007986	rnpc3	96	49.602	Lepisosteus_oculatus
ENSXETG00000025027	rnpc3	97	52.000	ENSLAFG00000032342	RNPC3	95	52.000	Loxodonta_africana
ENSXETG00000025027	rnpc3	83	43.224	ENSMFAG00000002917	-	88	44.203	Macaca_fascicularis
ENSXETG00000025027	rnpc3	95	52.653	ENSMFAG00000002004	RNPC3	93	52.653	Macaca_fascicularis
ENSXETG00000025027	rnpc3	95	52.449	ENSMMUG00000018039	RNPC3	93	52.449	Macaca_mulatta
ENSXETG00000025027	rnpc3	74	51.131	ENSMMUG00000002098	-	86	54.726	Macaca_mulatta
ENSXETG00000025027	rnpc3	95	48.776	ENSMNEG00000033950	RNPC3	92	48.776	Macaca_nemestrina
ENSXETG00000025027	rnpc3	80	42.788	ENSMNEG00000029209	-	88	44.665	Macaca_nemestrina
ENSXETG00000025027	rnpc3	83	45.287	ENSMLEG00000034644	-	88	45.972	Mandrillus_leucophaeus
ENSXETG00000025027	rnpc3	95	52.857	ENSMLEG00000033628	RNPC3	93	52.857	Mandrillus_leucophaeus
ENSXETG00000025027	rnpc3	96	42.400	ENSMAMG00000007496	rnpc3	96	42.914	Mastacembelus_armatus
ENSXETG00000025027	rnpc3	96	43.849	ENSMZEG00005020233	rnpc3	97	44.576	Maylandia_zebra
ENSXETG00000025027	rnpc3	89	51.374	ENSMGAG00000006381	RNPC3	99	53.132	Meleagris_gallopavo
ENSXETG00000025027	rnpc3	97	51.205	ENSMAUG00000001358	Rnpc3	98	50.389	Mesocricetus_auratus
ENSXETG00000025027	rnpc3	99	51.367	ENSMICG00000029591	RNPC3	97	51.257	Microcebus_murinus
ENSXETG00000025027	rnpc3	96	51.004	ENSMOCG00000013423	Rnpc3	98	50.389	Microtus_ochrogaster
ENSXETG00000025027	rnpc3	96	40.600	ENSMMOG00000005309	rnpc3	99	41.715	Mola_mola
ENSXETG00000025027	rnpc3	97	51.992	ENSMODG00000002946	RNPC3	95	51.400	Monodelphis_domestica
ENSXETG00000025027	rnpc3	96	42.574	ENSMALG00000015471	rnpc3	97	43.110	Monopterus_albus
ENSXETG00000025027	rnpc3	99	48.633	MGP_CAROLIEiJ_G0025555	Rnpc3	100	48.479	Mus_caroli
ENSXETG00000025027	rnpc3	100	49.143	ENSMUSG00000027981	Rnpc3	100	49.146	Mus_musculus
ENSXETG00000025027	rnpc3	99	49.216	MGP_PahariEiJ_G0027001	Rnpc3	99	49.216	Mus_pahari
ENSXETG00000025027	rnpc3	99	48.824	MGP_SPRETEiJ_G0026505	Rnpc3	100	48.664	Mus_spretus
ENSXETG00000025027	rnpc3	97	51.503	ENSMPUG00000007349	RNPC3	95	51.503	Mustela_putorius_furo
ENSXETG00000025027	rnpc3	99	51.257	ENSMLUG00000028743	RNPC3	98	51.257	Myotis_lucifugus
ENSXETG00000025027	rnpc3	99	51.357	ENSNGAG00000010939	Rnpc3	98	51.357	Nannospalax_galili
ENSXETG00000025027	rnpc3	96	43.888	ENSNBRG00000012196	rnpc3	93	44.622	Neolamprologus_brichardi
ENSXETG00000025027	rnpc3	96	51.606	ENSNLEG00000012013	RNPC3	95	51.606	Nomascus_leucogenys
ENSXETG00000025027	rnpc3	99	49.706	ENSODEG00000007612	RNPC3	97	49.706	Octodon_degus
ENSXETG00000025027	rnpc3	96	44.711	ENSONIG00000004770	rnpc3	99	45.817	Oreochromis_niloticus
ENSXETG00000025027	rnpc3	92	53.249	ENSOANG00000008220	RNPC3	100	53.263	Ornithorhynchus_anatinus
ENSXETG00000025027	rnpc3	97	52.000	ENSOCUG00000004016	RNPC3	95	52.000	Oryctolagus_cuniculus
ENSXETG00000025027	rnpc3	96	45.090	ENSORLG00000005694	rnpc3	99	45.455	Oryzias_latipes
ENSXETG00000025027	rnpc3	96	45.090	ENSORLG00020005513	rnpc3	96	45.833	Oryzias_latipes_hni
ENSXETG00000025027	rnpc3	97	44.727	ENSORLG00015002179	rnpc3	99	45.455	Oryzias_latipes_hsok
ENSXETG00000025027	rnpc3	96	44.779	ENSOMEG00000017737	rnpc3	96	45.726	Oryzias_melastigma
ENSXETG00000025027	rnpc3	99	51.758	ENSOGAG00000026182	RNPC3	97	51.644	Otolemur_garnettii
ENSXETG00000025027	rnpc3	97	50.881	ENSOARG00000018719	RNPC3	95	51.772	Ovis_aries
ENSXETG00000025027	rnpc3	96	43.487	ENSPPAG00000030278	-	99	43.898	Pan_paniscus
ENSXETG00000025027	rnpc3	96	52.000	ENSPPAG00000037459	RNPC3	95	52.000	Pan_paniscus
ENSXETG00000025027	rnpc3	98	51.779	ENSPPRG00000020246	RNPC3	96	51.779	Panthera_pardus
ENSXETG00000025027	rnpc3	98	51.779	ENSPTIG00000009887	RNPC3	98	51.779	Panthera_tigris_altaica
ENSXETG00000025027	rnpc3	96	42.914	ENSPTRG00000044227	-	95	44.583	Pan_troglodytes
ENSXETG00000025027	rnpc3	96	52.104	ENSPTRG00000033902	RNPC3	95	52.104	Pan_troglodytes
ENSXETG00000025027	rnpc3	96	41.000	ENSPANG00000029957	-	96	41.889	Papio_anubis
ENSXETG00000025027	rnpc3	95	52.556	ENSPANG00000012137	RNPC3	93	52.556	Papio_anubis
ENSXETG00000025027	rnpc3	97	44.554	ENSPKIG00000008828	rnpc3	97	45.489	Paramormyrops_kingsleyae
ENSXETG00000025027	rnpc3	52	53.846	ENSPSIG00000007396	RNPC3	84	51.736	Pelodiscus_sinensis
ENSXETG00000025027	rnpc3	97	43.849	ENSPMGG00000011742	rnpc3	99	42.992	Periophthalmus_magnuspinnatus
ENSXETG00000025027	rnpc3	90	50.324	ENSPEMG00000020112	Rnpc3	99	51.310	Peromyscus_maniculatus_bairdii
ENSXETG00000025027	rnpc3	98	39.434	ENSPMAG00000003778	rnpc3	98	40.678	Petromyzon_marinus
ENSXETG00000025027	rnpc3	97	52.789	ENSPCIG00000004415	-	95	52.590	Phascolarctos_cinereus
ENSXETG00000025027	rnpc3	97	42.970	ENSPFOG00000009895	rnpc3	97	43.110	Poecilia_formosa
ENSXETG00000025027	rnpc3	97	42.574	ENSPLAG00000012023	rnpc3	97	42.717	Poecilia_latipinna
ENSXETG00000025027	rnpc3	97	43.168	ENSPMEG00000003663	rnpc3	97	43.307	Poecilia_mexicana
ENSXETG00000025027	rnpc3	97	42.659	ENSPREG00000010206	rnpc3	98	42.913	Poecilia_reticulata
ENSXETG00000025027	rnpc3	80	46.523	ENSPPYG00000001102	RNPC3	93	46.523	Pongo_abelii
ENSXETG00000025027	rnpc3	96	43.888	ENSPNYG00000020603	rnpc3	96	44.622	Pundamilia_nyererei
ENSXETG00000025027	rnpc3	76	57.209	ENSPNAG00000000524	rnpc3	95	40.437	Pygocentrus_nattereri
ENSXETG00000025027	rnpc3	99	49.412	ENSRNOG00000017310	Rnpc3	97	49.412	Rattus_norvegicus
ENSXETG00000025027	rnpc3	95	48.880	ENSRBIG00000043897	RNPC3	93	48.880	Rhinopithecus_bieti
ENSXETG00000025027	rnpc3	95	52.857	ENSRROG00000032334	RNPC3	93	52.857	Rhinopithecus_roxellana
ENSXETG00000025027	rnpc3	96	51.205	ENSSBOG00000024473	RNPC3	95	51.205	Saimiri_boliviensis_boliviensis
ENSXETG00000025027	rnpc3	97	52.381	ENSSHAG00000011859	RNPC3	95	52.381	Sarcophilus_harrisii
ENSXETG00000025027	rnpc3	96	48.708	ENSSFOG00015013055	rnpc3	98	49.109	Scleropages_formosus
ENSXETG00000025027	rnpc3	52	46.863	ENSSMAG00000020346	rnpc3	97	45.455	Scophthalmus_maximus
ENSXETG00000025027	rnpc3	96	44.314	ENSSDUG00000006600	rnpc3	96	44.794	Seriola_dumerili
ENSXETG00000025027	rnpc3	96	44.314	ENSSLDG00000007979	rnpc3	96	44.794	Seriola_lalandi_dorsalis
ENSXETG00000025027	rnpc3	97	50.290	ENSSPUG00000008539	-	96	51.538	Sphenodon_punctatus
ENSXETG00000025027	rnpc3	97	45.873	ENSSPUG00000003872	-	93	49.290	Sphenodon_punctatus
ENSXETG00000025027	rnpc3	96	44.643	ENSSPAG00000005633	rnpc3	96	46.667	Stegastes_partitus
ENSXETG00000025027	rnpc3	97	52.400	ENSSSCG00000037254	RNPC3	95	53.200	Sus_scrofa
ENSXETG00000025027	rnpc3	89	52.814	ENSTGUG00000004795	-	100	52.814	Taeniopygia_guttata
ENSXETG00000025027	rnpc3	96	45.924	ENSTNIG00000018963	rnpc3	97	46.245	Tetraodon_nigroviridis
ENSXETG00000025027	rnpc3	97	52.600	ENSUMAG00000007775	RNPC3	96	52.600	Ursus_maritimus
ENSXETG00000025027	rnpc3	97	52.600	ENSVVUG00000000331	RNPC3	95	52.600	Vulpes_vulpes
ENSXETG00000025027	rnpc3	97	41.874	ENSXCOG00000005013	rnpc3	98	43.580	Xiphophorus_couchianus
ENSXETG00000025027	rnpc3	97	43.651	ENSXMAG00000006495	rnpc3	98	43.787	Xiphophorus_maculatus