EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Orthologs

Description

Ensembl ID: ENSXETG00000025091 (Gene tree)
Gene ID: -
Gene Symbol: trnt1
Alias: -
Full Name: Xenopus tropicalis tRNA nucleotidyl transferase%2C CCA-adding%2C 1 (trnt1)%2C mRNA.
Gene Type: protein_coding
Species: Xenopus_tropicalis
Status: putative
Strand: Plus strand
Length: 7272 bases
Position: chrGL172996.1:868585-875856
Accession: NM_203675
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSXETP00000053801	PolyA_pol	PF01743.20	1.3e-33	1	1
ENSXETP00000060102	PolyA_pol	PF01743.20	1.9e-33	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSXETT00000066167	-	1493	XM_012960722	ENSXETP00000060102	403 (aa)	XP_012816176	F7DM70
ENSXETT00000053801	-	1595	XM_012960722	ENSXETP00000053801	437 (aa)	XP_012816176	F6V8Z1

Gene Model

Click here to download ENSXETG00000025091's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSXETG00000025091's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSXETG00000025091	trnt1	99	65.423	ENSG00000072756	TRNT1	96	63.962	Homo_sapiens
ENSXETG00000025091	trnt1	99	62.687	ENSAPOG00000013687	trnt1	98	61.190	Acanthochromis_polyacanthus
ENSXETG00000025091	trnt1	99	65.099	ENSAMEG00000014520	TRNT1	98	62.877	Ailuropoda_melanoleuca
ENSXETG00000025091	trnt1	99	61.692	ENSACIG00000021706	trnt1	99	60.235	Amphilophus_citrinellus
ENSXETG00000025091	trnt1	99	61.443	ENSAOCG00000024612	trnt1	98	60.476	Amphiprion_ocellaris
ENSXETG00000025091	trnt1	98	55.190	ENSAPEG00000022627	trnt1	95	54.237	Amphiprion_percula
ENSXETG00000025091	trnt1	99	62.687	ENSATEG00000008928	trnt1	99	62.687	Anabas_testudineus
ENSXETG00000025091	trnt1	94	68.158	ENSAPLG00000004258	TRNT1	95	67.708	Anas_platyrhynchos
ENSXETG00000025091	trnt1	99	64.851	ENSACAG00000005657	TRNT1	94	63.133	Anolis_carolinensis
ENSXETG00000025091	trnt1	99	65.423	ENSANAG00000024802	TRNT1	95	64.423	Aotus_nancymaae
ENSXETG00000025091	trnt1	99	61.443	ENSACLG00000022227	trnt1	98	60.476	Astatotilapia_calliptera
ENSXETG00000025091	trnt1	99	64.179	ENSAMXG00000003960	trnt1	97	62.648	Astyanax_mexicanus
ENSXETG00000025091	trnt1	99	65.672	ENSBTAG00000019534	TRNT1	98	63.403	Bos_taurus
ENSXETG00000025091	trnt1	99	42.476	WBGene00010089	hpo-31	94	42.373	Caenorhabditis_elegans
ENSXETG00000025091	trnt1	99	65.423	ENSCJAG00000015466	TRNT1	95	64.423	Callithrix_jacchus
ENSXETG00000025091	trnt1	99	65.672	ENSCAFG00000005985	TRNT1	97	63.170	Canis_familiaris
ENSXETG00000025091	trnt1	99	65.672	ENSCAFG00020014746	TRNT1	97	63.170	Canis_lupus_dingo
ENSXETG00000025091	trnt1	99	65.920	ENSCHIG00000007030	TRNT1	97	63.636	Capra_hircus
ENSXETG00000025091	trnt1	99	65.920	ENSTSYG00000013390	TRNT1	98	63.636	Carlito_syrichta
ENSXETG00000025091	trnt1	93	54.400	ENSCAPG00000006891	TRNT1	99	54.400	Cavia_aperea
ENSXETG00000025091	trnt1	99	65.920	ENSCPOG00000007849	TRNT1	98	63.869	Cavia_porcellus
ENSXETG00000025091	trnt1	99	65.578	ENSCCAG00000002919	TRNT1	96	67.448	Cebus_capucinus
ENSXETG00000025091	trnt1	99	65.920	ENSCATG00000031985	TRNT1	94	64.663	Cercocebus_atys
ENSXETG00000025091	trnt1	99	66.418	ENSCLAG00000005186	TRNT1	98	64.569	Chinchilla_lanigera
ENSXETG00000025091	trnt1	99	66.169	ENSCSAG00000011052	TRNT1	95	64.904	Chlorocebus_sabaeus
ENSXETG00000025091	trnt1	83	73.410	ENSCHOG00000005712	TRNT1	80	70.588	Choloepus_hoffmanni
ENSXETG00000025091	trnt1	99	66.914	ENSCPBG00000017636	TRNT1	96	65.083	Chrysemys_picta_bellii
ENSXETG00000025091	trnt1	95	44.909	ENSCING00000007069	-	99	43.596	Ciona_intestinalis
ENSXETG00000025091	trnt1	98	43.176	ENSCSAVG00000007494	-	94	43.176	Ciona_savignyi
ENSXETG00000025091	trnt1	99	66.169	ENSCANG00000039030	TRNT1	95	64.904	Colobus_angolensis_palliatus
ENSXETG00000025091	trnt1	99	66.667	ENSCGRG00001009998	Trnt1	98	64.651	Cricetulus_griseus_chok1gshd
ENSXETG00000025091	trnt1	99	66.667	ENSCGRG00000013410	Trnt1	96	66.667	Cricetulus_griseus_crigri
ENSXETG00000025091	trnt1	99	62.935	ENSCSEG00000008157	trnt1	96	64.103	Cynoglossus_semilaevis
ENSXETG00000025091	trnt1	99	61.940	ENSCVAG00000019770	trnt1	96	61.858	Cyprinodon_variegatus
ENSXETG00000025091	trnt1	99	64.500	ENSDARG00000075297	trnt1	97	62.857	Danio_rerio
ENSXETG00000025091	trnt1	99	65.920	ENSDNOG00000008837	TRNT1	95	64.904	Dasypus_novemcinctus
ENSXETG00000025091	trnt1	99	66.169	ENSDORG00000014035	Trnt1	98	64.103	Dipodomys_ordii
ENSXETG00000025091	trnt1	95	47.044	FBgn0037369	CG2100	83	45.499	Drosophila_melanogaster
ENSXETG00000025091	trnt1	59	68.487	ENSETEG00000018177	TRNT1	100	66.135	Echinops_telfairi
ENSXETG00000025091	trnt1	99	60.448	ENSEBUG00000012779	-	96	59.854	Eptatretus_burgeri
ENSXETG00000025091	trnt1	99	65.423	ENSEASG00005003577	TRNT1	98	63.636	Equus_asinus_asinus
ENSXETG00000025091	trnt1	99	65.672	ENSECAG00000014420	TRNT1	98	63.869	Equus_caballus
ENSXETG00000025091	trnt1	99	66.418	ENSEEUG00000009567	TRNT1	98	65.268	Erinaceus_europaeus
ENSXETG00000025091	trnt1	99	63.184	ENSELUG00000003802	trnt1	96	62.651	Esox_lucius
ENSXETG00000025091	trnt1	99	65.423	ENSFCAG00000026805	TRNT1	97	63.170	Felis_catus
ENSXETG00000025091	trnt1	94	69.474	ENSFALG00000013539	TRNT1	99	69.474	Ficedula_albicollis
ENSXETG00000025091	trnt1	99	65.672	ENSFDAG00000018412	TRNT1	95	64.663	Fukomys_damarensis
ENSXETG00000025091	trnt1	99	61.443	ENSFHEG00000019294	trnt1	96	61.125	Fundulus_heteroclitus
ENSXETG00000025091	trnt1	99	62.189	ENSGMOG00000007460	trnt1	96	61.650	Gadus_morhua
ENSXETG00000025091	trnt1	99	67.742	ENSGALG00000017368	TRNT1	97	64.953	Gallus_gallus
ENSXETG00000025091	trnt1	99	62.438	ENSGAFG00000008647	trnt1	96	62.347	Gambusia_affinis
ENSXETG00000025091	trnt1	99	61.692	ENSGACG00000011903	trnt1	99	62.217	Gasterosteus_aculeatus
ENSXETG00000025091	trnt1	99	66.420	ENSGAGG00000020942	TRNT1	94	65.542	Gopherus_agassizii
ENSXETG00000025091	trnt1	99	65.920	ENSGGOG00000015286	TRNT1	96	64.678	Gorilla_gorilla
ENSXETG00000025091	trnt1	99	61.194	ENSHBUG00000002797	trnt1	98	60.238	Haplochromis_burtoni
ENSXETG00000025091	trnt1	99	65.920	ENSHGLG00000003649	TRNT1	95	65.144	Heterocephalus_glaber_female
ENSXETG00000025091	trnt1	98	61.307	ENSHGLG00000000221	-	97	58.920	Heterocephalus_glaber_female
ENSXETG00000025091	trnt1	99	65.423	ENSHGLG00100016421	TRNT1	95	64.663	Heterocephalus_glaber_male
ENSXETG00000025091	trnt1	99	61.194	ENSHCOG00000010618	trnt1	95	60.880	Hippocampus_comes
ENSXETG00000025091	trnt1	99	63.184	ENSIPUG00000000971	trnt1	94	62.592	Ictalurus_punctatus
ENSXETG00000025091	trnt1	99	66.005	ENSSTOG00000000150	TRNT1	90	71.277	Ictidomys_tridecemlineatus
ENSXETG00000025091	trnt1	99	65.920	ENSJJAG00000018561	Trnt1	96	64.623	Jaculus_jaculus
ENSXETG00000025091	trnt1	99	62.250	ENSKMAG00000011307	trnt1	99	60.757	Kryptolebias_marmoratus
ENSXETG00000025091	trnt1	98	55.949	ENSLBEG00000019457	trnt1	95	55.419	Labrus_bergylta
ENSXETG00000025091	trnt1	99	64.516	ENSLACG00000013227	TRNT1	94	64.146	Latimeria_chalumnae
ENSXETG00000025091	trnt1	99	65.423	ENSLOCG00000011105	trnt1	93	65.281	Lepisosteus_oculatus
ENSXETG00000025091	trnt1	99	65.672	ENSLAFG00000023191	TRNT1	98	63.636	Loxodonta_africana
ENSXETG00000025091	trnt1	99	66.169	ENSMFAG00000045113	TRNT1	94	64.904	Macaca_fascicularis
ENSXETG00000025091	trnt1	99	66.169	ENSMMUG00000017983	TRNT1	94	64.904	Macaca_mulatta
ENSXETG00000025091	trnt1	99	66.169	ENSMNEG00000037805	TRNT1	94	64.904	Macaca_nemestrina
ENSXETG00000025091	trnt1	95	67.717	ENSMLEG00000033671	TRNT1	99	67.717	Mandrillus_leucophaeus
ENSXETG00000025091	trnt1	99	62.438	ENSMAMG00000023401	trnt1	99	60.706	Mastacembelus_armatus
ENSXETG00000025091	trnt1	99	61.443	ENSMZEG00005009141	trnt1	98	60.476	Maylandia_zebra
ENSXETG00000025091	trnt1	78	67.405	ENSMGAG00000009971	TRNT1	98	67.405	Meleagris_gallopavo
ENSXETG00000025091	trnt1	99	66.667	ENSMAUG00000020707	Trnt1	98	64.802	Mesocricetus_auratus
ENSXETG00000025091	trnt1	99	66.169	ENSMICG00000016615	TRNT1	95	65.385	Microcebus_murinus
ENSXETG00000025091	trnt1	99	66.667	ENSMOCG00000004539	Trnt1	99	64.352	Microtus_ochrogaster
ENSXETG00000025091	trnt1	99	61.443	ENSMMOG00000010742	trnt1	98	60.238	Mola_mola
ENSXETG00000025091	trnt1	99	66.418	ENSMODG00000004368	TRNT1	95	65.385	Monodelphis_domestica
ENSXETG00000025091	trnt1	99	59.950	ENSMALG00000008376	trnt1	95	59.658	Monopterus_albus
ENSXETG00000025091	trnt1	99	67.164	MGP_CAROLIEiJ_G0028698	Trnt1	96	68.797	Mus_caroli
ENSXETG00000025091	trnt1	99	66.915	ENSMUSG00000013736	Trnt1	98	64.802	Mus_musculus
ENSXETG00000025091	trnt1	99	67.164	MGP_PahariEiJ_G0022449	Trnt1	97	67.662	Mus_pahari
ENSXETG00000025091	trnt1	99	66.915	MGP_SPRETEiJ_G0029726	Trnt1	98	64.802	Mus_spretus
ENSXETG00000025091	trnt1	99	65.920	ENSMPUG00000017017	TRNT1	97	63.636	Mustela_putorius_furo
ENSXETG00000025091	trnt1	95	67.801	ENSMLUG00000011864	TRNT1	99	67.801	Myotis_lucifugus
ENSXETG00000025091	trnt1	99	65.920	ENSNGAG00000000537	Trnt1	98	64.319	Nannospalax_galili
ENSXETG00000025091	trnt1	80	61.300	ENSNBRG00000023606	trnt1	98	60.117	Neolamprologus_brichardi
ENSXETG00000025091	trnt1	99	65.920	ENSNLEG00000003226	TRNT1	95	64.904	Nomascus_leucogenys
ENSXETG00000025091	trnt1	99	66.169	ENSMEUG00000004684	TRNT1	97	64.455	Notamacropus_eugenii
ENSXETG00000025091	trnt1	95	64.567	ENSOPRG00000015067	TRNT1	99	64.567	Ochotona_princeps
ENSXETG00000025091	trnt1	99	66.418	ENSODEG00000007597	TRNT1	98	64.336	Octodon_degus
ENSXETG00000025091	trnt1	99	61.194	ENSONIG00000020273	trnt1	97	60.238	Oreochromis_niloticus
ENSXETG00000025091	trnt1	99	65.664	ENSOANG00000007514	TRNT1	98	63.170	Ornithorhynchus_anatinus
ENSXETG00000025091	trnt1	99	65.174	ENSOCUG00000008580	TRNT1	96	64.593	Oryctolagus_cuniculus
ENSXETG00000025091	trnt1	99	59.950	ENSORLG00000003165	trnt1	97	59.466	Oryzias_latipes
ENSXETG00000025091	trnt1	99	60.199	ENSORLG00020022060	trnt1	97	59.709	Oryzias_latipes_hni
ENSXETG00000025091	trnt1	99	60.199	ENSORLG00015018915	trnt1	96	59.709	Oryzias_latipes_hsok
ENSXETG00000025091	trnt1	99	59.701	ENSOMEG00000003331	trnt1	99	58.019	Oryzias_melastigma
ENSXETG00000025091	trnt1	99	65.920	ENSOARG00000008631	TRNT1	97	63.636	Ovis_aries
ENSXETG00000025091	trnt1	99	65.672	ENSPPAG00000043566	TRNT1	96	64.439	Pan_paniscus
ENSXETG00000025091	trnt1	99	65.672	ENSPPRG00000001327	TRNT1	95	64.423	Panthera_pardus
ENSXETG00000025091	trnt1	99	65.672	ENSPTIG00000011448	TRNT1	97	63.403	Panthera_tigris_altaica
ENSXETG00000025091	trnt1	99	65.423	ENSPTRG00000014564	TRNT1	96	64.200	Pan_troglodytes
ENSXETG00000025091	trnt1	99	65.920	ENSPANG00000025944	TRNT1	94	64.663	Papio_anubis
ENSXETG00000025091	trnt1	99	67.164	ENSPKIG00000020015	trnt1	94	66.993	Paramormyrops_kingsleyae
ENSXETG00000025091	trnt1	95	68.063	ENSPSIG00000017356	TRNT1	99	67.877	Pelodiscus_sinensis
ENSXETG00000025091	trnt1	99	63.433	ENSPMGG00000008888	trnt1	96	61.962	Periophthalmus_magnuspinnatus
ENSXETG00000025091	trnt1	99	67.164	ENSPEMG00000019845	Trnt1	98	65.268	Peromyscus_maniculatus_bairdii
ENSXETG00000025091	trnt1	99	67.662	ENSPCIG00000030436	TRNT1	95	66.587	Phascolarctos_cinereus
ENSXETG00000025091	trnt1	99	62.935	ENSPFOG00000006194	trnt1	95	62.836	Poecilia_formosa
ENSXETG00000025091	trnt1	99	62.935	ENSPLAG00000015623	trnt1	99	62.935	Poecilia_latipinna
ENSXETG00000025091	trnt1	99	62.935	ENSPMEG00000012216	trnt1	99	62.935	Poecilia_mexicana
ENSXETG00000025091	trnt1	99	62.935	ENSPREG00000021470	trnt1	98	61.667	Poecilia_reticulata
ENSXETG00000025091	trnt1	99	65.423	ENSPPYG00000013702	TRNT1	95	64.663	Pongo_abelii
ENSXETG00000025091	trnt1	95	67.717	ENSPCAG00000001951	TRNT1	99	67.717	Procavia_capensis
ENSXETG00000025091	trnt1	99	66.169	ENSPCOG00000022228	TRNT1	98	64.336	Propithecus_coquereli
ENSXETG00000025091	trnt1	95	68.241	ENSPVAG00000008784	TRNT1	99	68.241	Pteropus_vampyrus
ENSXETG00000025091	trnt1	99	60.945	ENSPNYG00000003120	trnt1	98	60.000	Pundamilia_nyererei
ENSXETG00000025091	trnt1	99	63.930	ENSPNAG00000000565	trnt1	97	62.559	Pygocentrus_nattereri
ENSXETG00000025091	trnt1	99	65.920	ENSRNOG00000006432	Trnt1	98	64.103	Rattus_norvegicus
ENSXETG00000025091	trnt1	99	65.174	ENSRBIG00000042632	TRNT1	95	63.942	Rhinopithecus_bieti
ENSXETG00000025091	trnt1	99	65.920	ENSRROG00000036866	TRNT1	95	64.663	Rhinopithecus_roxellana
ENSXETG00000025091	trnt1	99	66.169	ENSSBOG00000021208	TRNT1	95	65.144	Saimiri_boliviensis_boliviensis
ENSXETG00000025091	trnt1	99	66.169	ENSSHAG00000018861	TRNT1	95	64.904	Sarcophilus_harrisii
ENSXETG00000025091	trnt1	99	65.423	ENSSFOG00015020844	trnt1	94	65.281	Scleropages_formosus
ENSXETG00000025091	trnt1	99	62.687	ENSSMAG00000015432	trnt1	96	61.190	Scophthalmus_maximus
ENSXETG00000025091	trnt1	99	61.194	ENSSDUG00000012320	trnt1	98	60.238	Seriola_dumerili
ENSXETG00000025091	trnt1	99	60.945	ENSSLDG00000009325	trnt1	98	60.000	Seriola_lalandi_dorsalis
ENSXETG00000025091	trnt1	60	58.921	ENSSLDG00000016463	-	91	58.996	Seriola_lalandi_dorsalis
ENSXETG00000025091	trnt1	95	68.241	ENSSPUG00000014153	TRNT1	99	68.241	Sphenodon_punctatus
ENSXETG00000025091	trnt1	99	60.500	ENSSPAG00000021005	trnt1	97	59.091	Stegastes_partitus
ENSXETG00000025091	trnt1	99	66.169	ENSSSCG00000011529	TRNT1	98	63.915	Sus_scrofa
ENSXETG00000025091	trnt1	99	67.494	ENSTGUG00000010192	TRNT1	99	67.494	Taeniopygia_guttata
ENSXETG00000025091	trnt1	99	60.945	ENSTRUG00000001088	trnt1	97	60.096	Takifugu_rubripes
ENSXETG00000025091	trnt1	99	59.701	ENSTNIG00000007363	trnt1	97	58.118	Tetraodon_nigroviridis
ENSXETG00000025091	trnt1	59	57.563	ENSTBEG00000006367	TRNT1	83	56.349	Tupaia_belangeri
ENSXETG00000025091	trnt1	99	65.920	ENSTTRG00000007803	TRNT1	98	63.869	Tursiops_truncatus
ENSXETG00000025091	trnt1	99	65.920	ENSUAMG00000022574	TRNT1	96	63.981	Ursus_americanus
ENSXETG00000025091	trnt1	99	65.672	ENSUMAG00000024092	TRNT1	96	63.744	Ursus_maritimus
ENSXETG00000025091	trnt1	99	65.672	ENSVVUG00000012810	TRNT1	97	63.170	Vulpes_vulpes
ENSXETG00000025091	trnt1	99	61.940	ENSXCOG00000010150	trnt1	96	61.858	Xiphophorus_couchianus
ENSXETG00000025091	trnt1	99	61.940	ENSXMAG00000002227	trnt1	96	61.858	Xiphophorus_maculatus