EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSXETG00000025484 (Gene tree)
Gene ID: -
Gene Symbol: rab11b.1
Alias: -
Full Name: Xenopus tropicalis RAB11B%2C member RAS oncogene family%2C gene 1 (rab11b.1)%2C mRNA.
Gene Type: protein_coding
Species: Xenopus_tropicalis
Status: putative
Strand: Plus strand
Length: 10695 bases
Position: chrGL173022.1:306309-317003
Accession: NM_001011048
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSXETP00000054294	MMR_HSR1	PF01926.23	3.5e-07	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSXETT00000054294	-	2146	-	ENSXETP00000054294	221 (aa)	-	F7CB58

Gene Model

Click here to download ENSXETG00000025484's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSXETG00000025484's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSXETG00000025484	rab11b.1	71	36.709	ENSXETG00000015712	rabl2b	68	36.709
ENSXETG00000025484	rab11b.1	90	32.020	ENSXETG00000005944	rab7b	94	32.020
ENSXETG00000025484	rab11b.1	84	39.683	ENSXETG00000020622	rab39a	89	39.683
ENSXETG00000025484	rab11b.1	92	41.667	ENSXETG00000002305	rab5a	89	41.667
ENSXETG00000025484	rab11b.1	70	35.484	ENSXETG00000030938	rab41	73	35.484
ENSXETG00000025484	rab11b.1	69	36.538	ENSXETG00000014257	mgc75872	78	36.538
ENSXETG00000025484	rab11b.1	57	31.008	ENSXETG00000010915	arl4c	65	31.008
ENSXETG00000025484	rab11b.1	67	36.667	ENSXETG00000003398	kras	85	37.500
ENSXETG00000025484	rab11b.1	73	34.756	ENSXETG00000005505	MRAS	81	36.207
ENSXETG00000025484	rab11b.1	78	47.429	ENSXETG00000032443	RAB39B	82	47.429
ENSXETG00000025484	rab11b.1	72	47.500	ENSXETG00000004556	rab18	77	47.500
ENSXETG00000025484	rab11b.1	90	34.826	ENSXETG00000008055	rab3b	96	34.359
ENSXETG00000025484	rab11b.1	83	38.624	ENSXETG00000018183	rab33a	86	38.624
ENSXETG00000025484	rab11b.1	73	43.210	ENSXETG00000004289	rab12	64	38.916
ENSXETG00000025484	rab11b.1	78	54.070	ENSXETG00000017184	rab2b	80	54.070
ENSXETG00000025484	rab11b.1	80	43.750	ENSXETG00000002201	rab15	82	43.750
ENSXETG00000025484	rab11b.1	67	30.519	ENSXETG00000007760	rap2b	87	32.317
ENSXETG00000025484	rab11b.1	88	36.548	ENSXETG00000016920	rab33b	83	36.548
ENSXETG00000025484	rab11b.1	73	32.927	ENSXETG00000022517	rerg	81	32.927
ENSXETG00000025484	rab11b.1	81	33.520	ENSXETG00000021449	nras	94	34.392
ENSXETG00000025484	rab11b.1	67	35.333	ENSXETG00000006040	hras	84	36.250
ENSXETG00000025484	rab11b.1	63	30.000	ENSXETG00000000910	arl8a	69	30.000
ENSXETG00000025484	rab11b.1	77	48.538	ENSXETG00000026943	rab35	99	42.523
ENSXETG00000025484	rab11b.1	73	38.922	ENSXETG00000013345	rab9a	83	38.922
ENSXETG00000025484	rab11b.1	65	35.417	ENSXETG00000004449	rab23	64	36.364
ENSXETG00000025484	rab11b.1	71	33.750	ENSXETG00000019257	rab34	62	33.750
ENSXETG00000025484	rab11b.1	63	30.000	ENSXETG00000005212	arl8b	70	30.000
ENSXETG00000025484	rab11b.1	67	34.000	ENSXETG00000014935	ralb	84	35.000
ENSXETG00000025484	rab11b.1	76	53.293	ENSXETG00000014011	rab1a	83	53.293
ENSXETG00000025484	rab11b.1	70	40.000	ENSXETG00000016176	rab7a	77	40.000
ENSXETG00000025484	rab11b.1	76	37.931	ENSXETG00000018133	rab9b	86	37.931
ENSXETG00000025484	rab11b.1	95	40.758	ENSXETG00000013633	rab30	97	40.758
ENSXETG00000025484	rab11b.1	100	94.118	ENSXETG00000021890	rab11b.2	100	94.118
ENSXETG00000025484	rab11b.1	99	58.296	ENSXETG00000020404	rab25	100	58.296
ENSXETG00000025484	rab11b.1	99	88.584	ENSXETG00000006639	rab11a	100	88.584
ENSXETG00000025484	rab11b.1	61	42.963	ENSXETG00000020729	rab13	84	42.963
ENSXETG00000025484	rab11b.1	82	45.304	ENSXETG00000011370	rab35	88	45.304
ENSXETG00000025484	rab11b.1	70	35.484	ENSXETG00000023200	rab6a	82	35.484
ENSXETG00000025484	rab11b.1	52	36.522	ENSXETG00000031363	-	54	36.522

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSXETG00000025484	rab11b.1	99	97.260	ENSAPOG00000023455	rab11bb	100	97.260	Acanthochromis_polyacanthus
ENSXETG00000025484	rab11b.1	99	84.475	ENSACIG00000019631	rab11bb	100	84.475	Amphilophus_citrinellus
ENSXETG00000025484	rab11b.1	99	96.804	ENSACIG00000024376	-	100	96.804	Amphilophus_citrinellus
ENSXETG00000025484	rab11b.1	99	97.260	ENSAOCG00000018239	rab11bb	100	97.260	Amphiprion_ocellaris
ENSXETG00000025484	rab11b.1	99	96.804	ENSAOCG00000018849	-	100	96.804	Amphiprion_ocellaris
ENSXETG00000025484	rab11b.1	99	97.260	ENSAPEG00000016590	rab11bb	100	97.260	Amphiprion_percula
ENSXETG00000025484	rab11b.1	99	96.347	ENSATEG00000023725	-	100	96.347	Anabas_testudineus
ENSXETG00000025484	rab11b.1	99	97.260	ENSATEG00000017696	rab11bb	100	97.260	Anabas_testudineus
ENSXETG00000025484	rab11b.1	93	99.512	ENSAPLG00000011046	-	94	99.512	Anas_platyrhynchos
ENSXETG00000025484	rab11b.1	99	97.260	ENSACLG00000007076	rab11bb	100	97.260	Astatotilapia_calliptera
ENSXETG00000025484	rab11b.1	99	96.804	ENSACLG00000005446	-	100	96.804	Astatotilapia_calliptera
ENSXETG00000025484	rab11b.1	99	97.260	ENSAMXG00000037623	-	100	97.260	Astyanax_mexicanus
ENSXETG00000025484	rab11b.1	99	97.717	ENSAMXG00000042655	rab11bb	100	97.717	Astyanax_mexicanus
ENSXETG00000025484	rab11b.1	99	97.260	ENSBTAG00000002475	RAB11B	100	97.260	Bos_taurus
ENSXETG00000025484	rab11b.1	95	95.735	ENSCHIG00000022426	-	94	95.735	Capra_hircus
ENSXETG00000025484	rab11b.1	99	97.260	ENSCATG00000029188	-	100	97.260	Cercocebus_atys
ENSXETG00000025484	rab11b.1	99	98.630	ENSCPBG00000017056	-	100	98.630	Chrysemys_picta_bellii
ENSXETG00000025484	rab11b.1	99	97.260	ENSCSEG00000012149	rab11bb	100	97.260	Cynoglossus_semilaevis
ENSXETG00000025484	rab11b.1	99	96.347	ENSCSEG00000007239	-	100	96.347	Cynoglossus_semilaevis
ENSXETG00000025484	rab11b.1	99	97.260	ENSCVAG00000017021	-	100	97.260	Cyprinodon_variegatus
ENSXETG00000025484	rab11b.1	99	95.890	ENSCVAG00000019718	-	100	95.890	Cyprinodon_variegatus
ENSXETG00000025484	rab11b.1	99	94.064	ENSCVAG00000019751	-	100	94.064	Cyprinodon_variegatus
ENSXETG00000025484	rab11b.1	99	97.260	ENSDARG00000090086	rab11bb	100	97.260	Danio_rerio
ENSXETG00000025484	rab11b.1	99	95.872	ENSETEG00000000905	-	99	95.872	Echinops_telfairi
ENSXETG00000025484	rab11b.1	98	94.907	ENSEASG00005003708	-	99	94.907	Equus_asinus_asinus
ENSXETG00000025484	rab11b.1	98	94.907	ENSECAG00000000716	RAB11B	99	94.907	Equus_caballus
ENSXETG00000025484	rab11b.1	99	95.890	ENSELUG00000000916	-	100	95.890	Esox_lucius
ENSXETG00000025484	rab11b.1	99	95.455	ENSELUG00000020948	-	98	97.674	Esox_lucius
ENSXETG00000025484	rab11b.1	99	96.347	ENSELUG00000021148	rab11bb	100	96.347	Esox_lucius
ENSXETG00000025484	rab11b.1	99	98.630	ENSFALG00000011828	-	100	98.630	Ficedula_albicollis
ENSXETG00000025484	rab11b.1	99	97.260	ENSFHEG00000018353	rab11bb	100	97.260	Fundulus_heteroclitus
ENSXETG00000025484	rab11b.1	99	96.347	ENSFHEG00000022676	-	100	96.347	Fundulus_heteroclitus
ENSXETG00000025484	rab11b.1	99	96.804	ENSGMOG00000009211	rab11bb	100	96.804	Gadus_morhua
ENSXETG00000025484	rab11b.1	98	92.627	ENSGMOG00000009668	-	99	92.627	Gadus_morhua
ENSXETG00000025484	rab11b.1	99	98.630	ENSGALG00000000613	RAB11B	100	98.630	Gallus_gallus
ENSXETG00000025484	rab11b.1	99	97.260	ENSGAFG00000007102	rab11bb	100	97.260	Gambusia_affinis
ENSXETG00000025484	rab11b.1	99	96.804	ENSGACG00000015479	rab11bb	100	96.804	Gasterosteus_aculeatus
ENSXETG00000025484	rab11b.1	99	94.091	ENSGACG00000013297	-	99	94.091	Gasterosteus_aculeatus
ENSXETG00000025484	rab11b.1	99	97.260	ENSGGOG00000014516	RAB11B	100	97.260	Gorilla_gorilla
ENSXETG00000025484	rab11b.1	99	96.804	ENSHBUG00000009947	-	100	96.804	Haplochromis_burtoni
ENSXETG00000025484	rab11b.1	99	97.260	ENSHBUG00000014777	rab11bb	100	97.260	Haplochromis_burtoni
ENSXETG00000025484	rab11b.1	99	91.781	ENSHCOG00000000985	-	100	91.781	Hippocampus_comes
ENSXETG00000025484	rab11b.1	99	94.521	ENSHCOG00000000954	-	100	94.521	Hippocampus_comes
ENSXETG00000025484	rab11b.1	99	97.717	ENSHCOG00000002423	rab11bb	100	97.717	Hippocampus_comes
ENSXETG00000025484	rab11b.1	99	98.174	ENSIPUG00000019927	rab11bb	100	98.174	Ictalurus_punctatus
ENSXETG00000025484	rab11b.1	99	97.717	ENSIPUG00000025100	rab11b	100	97.717	Ictalurus_punctatus
ENSXETG00000025484	rab11b.1	99	96.804	ENSKMAG00000006170	-	100	96.804	Kryptolebias_marmoratus
ENSXETG00000025484	rab11b.1	99	97.260	ENSKMAG00000009033	rab11bb	100	97.260	Kryptolebias_marmoratus
ENSXETG00000025484	rab11b.1	99	96.804	ENSLBEG00000015248	rab11bb	100	96.804	Labrus_bergylta
ENSXETG00000025484	rab11b.1	99	96.347	ENSLBEG00000004172	-	100	96.347	Labrus_bergylta
ENSXETG00000025484	rab11b.1	99	89.041	ENSLBEG00000005981	-	100	89.041	Labrus_bergylta
ENSXETG00000025484	rab11b.1	99	98.630	ENSLACG00000016857	-	100	98.630	Latimeria_chalumnae
ENSXETG00000025484	rab11b.1	99	97.260	ENSMFAG00000003654	RAB11B	100	97.260	Macaca_fascicularis
ENSXETG00000025484	rab11b.1	99	97.260	ENSMLEG00000030601	-	100	97.260	Mandrillus_leucophaeus
ENSXETG00000025484	rab11b.1	99	95.890	ENSMAMG00000018533	-	100	95.890	Mastacembelus_armatus
ENSXETG00000025484	rab11b.1	99	96.804	ENSMAMG00000006378	rab11bb	100	96.804	Mastacembelus_armatus
ENSXETG00000025484	rab11b.1	99	97.260	ENSMZEG00005003352	rab11bb	100	97.260	Maylandia_zebra
ENSXETG00000025484	rab11b.1	99	96.804	ENSMZEG00005010975	-	100	96.804	Maylandia_zebra
ENSXETG00000025484	rab11b.1	99	97.260	ENSMICG00000034065	-	100	97.260	Microcebus_murinus
ENSXETG00000025484	rab11b.1	99	96.804	ENSMMOG00000001250	-	100	96.804	Mola_mola
ENSXETG00000025484	rab11b.1	99	95.413	ENSMMOG00000001238	-	99	95.413	Mola_mola
ENSXETG00000025484	rab11b.1	93	98.537	ENSMMOG00000007917	rab11bb	100	98.537	Mola_mola
ENSXETG00000025484	rab11b.1	99	98.630	ENSMODG00000003841	-	100	98.630	Monodelphis_domestica
ENSXETG00000025484	rab11b.1	99	97.260	ENSMALG00000022187	rab11bb	100	97.260	Monopterus_albus
ENSXETG00000025484	rab11b.1	93	88.889	ENSMLUG00000006677	-	100	88.889	Myotis_lucifugus
ENSXETG00000025484	rab11b.1	99	96.804	ENSNBRG00000023885	-	100	96.804	Neolamprologus_brichardi
ENSXETG00000025484	rab11b.1	99	97.260	ENSNBRG00000000372	rab11bb	100	97.260	Neolamprologus_brichardi
ENSXETG00000025484	rab11b.1	99	98.630	ENSMEUG00000003686	-	100	98.630	Notamacropus_eugenii
ENSXETG00000025484	rab11b.1	99	96.804	ENSONIG00000002544	-	100	96.804	Oreochromis_niloticus
ENSXETG00000025484	rab11b.1	99	97.260	ENSONIG00000010435	rab11bb	100	97.260	Oreochromis_niloticus
ENSXETG00000025484	rab11b.1	99	94.977	ENSORLG00000015284	-	72	94.977	Oryzias_latipes
ENSXETG00000025484	rab11b.1	99	96.804	ENSORLG00000013938	rab11bb	100	96.804	Oryzias_latipes
ENSXETG00000025484	rab11b.1	99	94.954	ENSORLG00020020844	RAB11B	99	94.954	Oryzias_latipes_hni
ENSXETG00000025484	rab11b.1	99	96.804	ENSORLG00020019393	rab11bb	100	96.804	Oryzias_latipes_hni
ENSXETG00000025484	rab11b.1	99	96.804	ENSORLG00015020173	rab11bb	100	96.804	Oryzias_latipes_hsok
ENSXETG00000025484	rab11b.1	99	94.954	ENSORLG00015016999	RAB11B	99	94.954	Oryzias_latipes_hsok
ENSXETG00000025484	rab11b.1	99	97.260	ENSOMEG00000017806	-	100	97.260	Oryzias_melastigma
ENSXETG00000025484	rab11b.1	99	95.890	ENSOMEG00000002562	-	100	95.890	Oryzias_melastigma
ENSXETG00000025484	rab11b.1	99	97.260	ENSPPAG00000028589	-	100	97.260	Pan_paniscus
ENSXETG00000025484	rab11b.1	99	97.260	ENSPTRG00000010422	RAB11B	100	97.260	Pan_troglodytes
ENSXETG00000025484	rab11b.1	99	97.260	ENSPANG00000007765	-	100	97.260	Papio_anubis
ENSXETG00000025484	rab11b.1	99	98.174	ENSPKIG00000011703	-	100	98.174	Paramormyrops_kingsleyae
ENSXETG00000025484	rab11b.1	97	96.744	ENSPKIG00000001389	-	69	96.744	Paramormyrops_kingsleyae
ENSXETG00000025484	rab11b.1	99	97.260	ENSPKIG00000011640	rab11bb	100	97.260	Paramormyrops_kingsleyae
ENSXETG00000025484	rab11b.1	95	94.907	ENSPSIG00000010242	-	84	94.907	Pelodiscus_sinensis
ENSXETG00000025484	rab11b.1	99	97.260	ENSPMGG00000009435	rab11bb	100	97.260	Periophthalmus_magnuspinnatus
ENSXETG00000025484	rab11b.1	99	93.119	ENSPMGG00000014336	-	99	93.119	Periophthalmus_magnuspinnatus
ENSXETG00000025484	rab11b.1	99	95.890	ENSPMGG00000014333	-	100	95.890	Periophthalmus_magnuspinnatus
ENSXETG00000025484	rab11b.1	96	96.714	ENSPCIG00000020371	-	99	96.714	Phascolarctos_cinereus
ENSXETG00000025484	rab11b.1	99	97.260	ENSPFOG00000024114	-	100	97.260	Poecilia_formosa
ENSXETG00000025484	rab11b.1	99	96.804	ENSPFOG00000006224	-	100	96.804	Poecilia_formosa
ENSXETG00000025484	rab11b.1	99	97.260	ENSPLAG00000001598	rab11bb	100	97.260	Poecilia_latipinna
ENSXETG00000025484	rab11b.1	99	96.804	ENSPLAG00000014207	-	100	96.804	Poecilia_latipinna
ENSXETG00000025484	rab11b.1	99	97.260	ENSPMEG00000012389	rab11bb	100	97.260	Poecilia_mexicana
ENSXETG00000025484	rab11b.1	99	96.804	ENSPMEG00000007842	-	100	96.804	Poecilia_mexicana
ENSXETG00000025484	rab11b.1	99	97.260	ENSPREG00000014269	rab11bb	100	97.260	Poecilia_reticulata
ENSXETG00000025484	rab11b.1	99	96.347	ENSPREG00000006336	-	100	96.347	Poecilia_reticulata
ENSXETG00000025484	rab11b.1	99	97.260	ENSPNYG00000004098	rab11bb	100	97.260	Pundamilia_nyererei
ENSXETG00000025484	rab11b.1	99	96.804	ENSPNYG00000019611	-	100	96.804	Pundamilia_nyererei
ENSXETG00000025484	rab11b.1	99	97.260	ENSRROG00000037812	-	100	97.260	Rhinopithecus_roxellana
ENSXETG00000025484	rab11b.1	96	97.183	ENSSHAG00000006816	-	97	97.183	Sarcophilus_harrisii
ENSXETG00000025484	rab11b.1	99	97.260	ENSSFOG00015009042	rab11bb	100	97.260	Scleropages_formosus
ENSXETG00000025484	rab11b.1	99	73.516	ENSSFOG00015006245	-	100	73.516	Scleropages_formosus
ENSXETG00000025484	rab11b.1	99	93.151	ENSSMAG00000018613	-	100	93.151	Scophthalmus_maximus
ENSXETG00000025484	rab11b.1	99	96.804	ENSSMAG00000004922	rab11bb	100	96.804	Scophthalmus_maximus
ENSXETG00000025484	rab11b.1	99	96.804	ENSSDUG00000002934	-	100	96.804	Seriola_dumerili
ENSXETG00000025484	rab11b.1	99	97.260	ENSSDUG00000013558	rab11bb	100	97.260	Seriola_dumerili
ENSXETG00000025484	rab11b.1	99	96.804	ENSSLDG00000005275	-	100	96.804	Seriola_lalandi_dorsalis
ENSXETG00000025484	rab11b.1	99	97.260	ENSSLDG00000020676	rab11bb	100	97.260	Seriola_lalandi_dorsalis
ENSXETG00000025484	rab11b.1	99	98.174	ENSSPUG00000002243	-	100	98.174	Sphenodon_punctatus
ENSXETG00000025484	rab11b.1	99	97.260	ENSSPAG00000011419	rab11bb	100	97.260	Stegastes_partitus
ENSXETG00000025484	rab11b.1	99	96.804	ENSSPAG00000014559	-	100	96.804	Stegastes_partitus
ENSXETG00000025484	rab11b.1	99	98.630	ENSTGUG00000000084	-	100	98.630	Taeniopygia_guttata
ENSXETG00000025484	rab11b.1	99	97.260	ENSTRUG00000022029	rab11bb	100	97.260	Takifugu_rubripes
ENSXETG00000025484	rab11b.1	98	96.774	ENSTRUG00000021619	-	100	96.774	Takifugu_rubripes
ENSXETG00000025484	rab11b.1	99	94.495	ENSTRUG00000021614	-	99	94.495	Takifugu_rubripes
ENSXETG00000025484	rab11b.1	98	96.774	ENSTNIG00000013182	-	100	96.774	Tetraodon_nigroviridis
ENSXETG00000025484	rab11b.1	99	94.037	ENSTNIG00000013184	-	99	94.037	Tetraodon_nigroviridis
ENSXETG00000025484	rab11b.1	92	96.059	ENSTNIG00000002003	-	100	96.059	Tetraodon_nigroviridis
ENSXETG00000025484	rab11b.1	99	95.890	ENSTNIG00000011081	rab11bb	100	95.890	Tetraodon_nigroviridis
ENSXETG00000025484	rab11b.1	93	98.049	ENSUAMG00000006639	-	99	98.049	Ursus_americanus
ENSXETG00000025484	rab11b.1	99	96.804	ENSXCOG00000009190	-	100	96.804	Xiphophorus_couchianus
ENSXETG00000025484	rab11b.1	99	97.260	ENSXCOG00000008042	-	100	97.260	Xiphophorus_couchianus
ENSXETG00000025484	rab11b.1	99	96.347	ENSXMAG00000024840	-	100	96.347	Xiphophorus_maculatus
ENSXETG00000025484	rab11b.1	99	97.260	ENSXMAG00000011926	rab11bb	100	97.260	Xiphophorus_maculatus