EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSXETG00000025903 (Gene tree)
Gene ID: -
Gene Symbol: ddx52
Alias: -
Full Name: DEAD-box helicase 52
Gene Type: protein_coding
Species: Xenopus_tropicalis
Status: putative
Strand: Minus strand
Length: 18080 bases
Position: chrGL173148.1:436331-454410
Accession: XB-GENE-993518
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSXETP00000017496	ResIII	PF04851.15	3.6e-06	1	1
ENSXETP00000061719	ResIII	PF04851.15	4.3e-06	1	1
ENSXETP00000017496	DEAD	PF00270.29	3.1e-39	1	1
ENSXETP00000061719	DEAD	PF00270.29	3.9e-39	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSXETT00000017496	-	1771	-	ENSXETP00000017496	587 (aa)	-	F7BCP5
ENSXETT00000066238	-	2059	-	ENSXETP00000061719	683 (aa)	-	F6PQG0

Gene Model

Click here to download ENSXETG00000025903's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSXETG00000025903's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSXETG00000025903	ddx52	67	31.235	ENSXETG00000009807	ddx23	52	31.235
ENSXETG00000025903	ddx52	51	44.643	ENSXETG00000017825	ddx1	55	44.643
ENSXETG00000025903	ddx52	64	30.400	ENSXETG00000010061	ddx6	76	30.585
ENSXETG00000025903	ddx52	54	37.500	ENSXETG00000006900	ddx17	58	37.500
ENSXETG00000025903	ddx52	74	32.653	ENSXETG00000000311	ddx59	71	32.653
ENSXETG00000025903	ddx52	70	30.465	ENSXETG00000011767	ddx43	61	30.465
ENSXETG00000025903	ddx52	60	31.073	ENSXETG00000020123	eif4a1	81	37.415
ENSXETG00000025903	ddx52	66	31.695	ENSXETG00000017231	ddx27	52	33.333
ENSXETG00000025903	ddx52	59	31.638	ENSXETG00000014458	ddx10	51	31.638
ENSXETG00000025903	ddx52	67	32.843	ENSXETG00000030832	DDX4	63	35.976
ENSXETG00000025903	ddx52	70	30.474	ENSXETG00000005435	ddx28	85	30.474
ENSXETG00000025903	ddx52	68	30.958	ENSXETG00000012580	ddx5	58	40.000
ENSXETG00000025903	ddx52	68	31.429	ENSXETG00000015477	ddx3x	58	34.254
ENSXETG00000025903	ddx52	60	31.373	ENSXETG00000019390	eif4a2	81	37.838

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSXETG00000025903	ddx52	100	71.817	ENSG00000278053	DDX52	97	71.912	Homo_sapiens
ENSXETG00000025903	ddx52	99	61.730	ENSAPOG00000008759	ddx52	85	75.879	Acanthochromis_polyacanthus
ENSXETG00000025903	ddx52	100	72.466	ENSAMEG00000013159	DDX52	97	72.466	Ailuropoda_melanoleuca
ENSXETG00000025903	ddx52	81	78.488	ENSACIG00000002843	ddx52	99	78.488	Amphilophus_citrinellus
ENSXETG00000025903	ddx52	99	60.797	ENSAOCG00000000356	-	86	62.454	Amphiprion_ocellaris
ENSXETG00000025903	ddx52	99	60.797	ENSAOCG00000007983	ddx52	89	74.146	Amphiprion_ocellaris
ENSXETG00000025903	ddx52	99	60.631	ENSAPEG00000023456	ddx52	86	74.146	Amphiprion_percula
ENSXETG00000025903	ddx52	99	61.513	ENSATEG00000021525	ddx52	86	64.639	Anabas_testudineus
ENSXETG00000025903	ddx52	82	75.519	ENSACAG00000006395	DDX52	93	80.788	Anolis_carolinensis
ENSXETG00000025903	ddx52	100	71.891	ENSANAG00000028587	DDX52	97	71.647	Aotus_nancymaae
ENSXETG00000025903	ddx52	99	60.544	ENSACLG00000021447	ddx52	93	74.747	Astatotilapia_calliptera
ENSXETG00000025903	ddx52	92	79.167	ENSAMXG00000024377	ddx52	96	74.178	Astyanax_mexicanus
ENSXETG00000025903	ddx52	100	71.429	ENSBTAG00000010313	DDX52	97	86.207	Bos_taurus
ENSXETG00000025903	ddx52	76	39.440	WBGene00011032	R05D11.4	79	38.866	Caenorhabditis_elegans
ENSXETG00000025903	ddx52	100	71.817	ENSCJAG00000015190	DDX52	97	71.525	Callithrix_jacchus
ENSXETG00000025903	ddx52	100	72.973	ENSCAFG00000018145	-	97	73.480	Canis_familiaris
ENSXETG00000025903	ddx52	100	72.804	ENSCAFG00000013554	-	97	86.207	Canis_familiaris
ENSXETG00000025903	ddx52	99	73.254	ENSCAFG00020003753	DDX52	97	72.743	Canis_lupus_dingo
ENSXETG00000025903	ddx52	100	72.156	ENSCHIG00000006275	DDX52	100	72.156	Capra_hircus
ENSXETG00000025903	ddx52	100	71.864	ENSTSYG00000002996	DDX52	97	71.864	Carlito_syrichta
ENSXETG00000025903	ddx52	92	59.594	ENSCAPG00000010436	DDX52	87	67.873	Cavia_aperea
ENSXETG00000025903	ddx52	100	72.373	ENSCPOG00000001232	DDX52	97	72.156	Cavia_porcellus
ENSXETG00000025903	ddx52	100	72.326	ENSCCAG00000023213	DDX52	97	72.034	Cebus_capucinus
ENSXETG00000025903	ddx52	100	71.284	ENSCATG00000041437	DDX52	97	71.525	Cercocebus_atys
ENSXETG00000025903	ddx52	100	72.203	ENSCLAG00000016292	DDX52	97	71.477	Chinchilla_lanigera
ENSXETG00000025903	ddx52	100	71.622	ENSCSAG00000006122	DDX52	97	71.525	Chlorocebus_sabaeus
ENSXETG00000025903	ddx52	72	83.721	ENSCHOG00000007413	DDX52	70	83.721	Choloepus_hoffmanni
ENSXETG00000025903	ddx52	99	70.813	ENSCPBG00000009806	DDX52	96	75.697	Chrysemys_picta_bellii
ENSXETG00000025903	ddx52	75	51.747	ENSCING00000016218	-	96	51.747	Ciona_intestinalis
ENSXETG00000025903	ddx52	66	53.093	ENSCSAVG00000003835	-	98	53.202	Ciona_savignyi
ENSXETG00000025903	ddx52	100	71.817	ENSCANG00000035140	DDX52	97	71.138	Colobus_angolensis_palliatus
ENSXETG00000025903	ddx52	100	71.864	ENSCGRG00001020695	Ddx52	97	71.695	Cricetulus_griseus_chok1gshd
ENSXETG00000025903	ddx52	100	71.695	ENSCGRG00000008830	Ddx52	97	71.525	Cricetulus_griseus_crigri
ENSXETG00000025903	ddx52	99	59.504	ENSCSEG00000010008	ddx52	91	66.087	Cynoglossus_semilaevis
ENSXETG00000025903	ddx52	85	78.173	ENSCVAG00000005302	ddx52	98	77.889	Cyprinodon_variegatus
ENSXETG00000025903	ddx52	99	65.180	ENSDARG00000100505	ddx52	97	64.924	Danio_rerio
ENSXETG00000025903	ddx52	100	71.864	ENSDNOG00000047454	DDX52	97	71.356	Dasypus_novemcinctus
ENSXETG00000025903	ddx52	100	72.402	ENSDORG00000004276	Ddx52	97	85.714	Dipodomys_ordii
ENSXETG00000025903	ddx52	73	52.204	FBgn0036754	CG5589	73	52.204	Drosophila_melanogaster
ENSXETG00000025903	ddx52	92	70.992	ENSETEG00000016042	DDX52	97	71.269	Echinops_telfairi
ENSXETG00000025903	ddx52	57	51.220	ENSEBUG00000010838	-	91	51.220	Eptatretus_burgeri
ENSXETG00000025903	ddx52	100	72.758	ENSEASG00005011275	DDX52	90	72.589	Equus_asinus_asinus
ENSXETG00000025903	ddx52	100	73.096	ENSECAG00000012286	DDX52	97	72.927	Equus_caballus
ENSXETG00000025903	ddx52	61	90.323	ENSEEUG00000001153	DDX52	68	67.386	Erinaceus_europaeus
ENSXETG00000025903	ddx52	84	74.500	ENSELUG00000018002	ddx52	99	74.500	Esox_lucius
ENSXETG00000025903	ddx52	100	73.083	ENSFCAG00000010573	DDX52	97	72.973	Felis_catus
ENSXETG00000025903	ddx52	99	70.017	ENSFALG00000005155	DDX52	95	72.874	Ficedula_albicollis
ENSXETG00000025903	ddx52	100	63.851	ENSFDAG00000011133	-	96	63.682	Fukomys_damarensis
ENSXETG00000025903	ddx52	100	71.721	ENSFDAG00000008340	-	97	71.721	Fukomys_damarensis
ENSXETG00000025903	ddx52	90	70.742	ENSFHEG00000017239	ddx52	90	76.238	Fundulus_heteroclitus
ENSXETG00000025903	ddx52	99	59.589	ENSGMOG00000014879	ddx52	99	62.602	Gadus_morhua
ENSXETG00000025903	ddx52	87	83.251	ENSGALG00000005489	DDX52	95	83.251	Gallus_gallus
ENSXETG00000025903	ddx52	99	61.421	ENSGAFG00000000702	ddx52	98	67.521	Gambusia_affinis
ENSXETG00000025903	ddx52	99	60.068	ENSGACG00000020624	ddx52	99	73.096	Gasterosteus_aculeatus
ENSXETG00000025903	ddx52	99	69.154	ENSGAGG00000007234	DDX52	96	74.597	Gopherus_agassizii
ENSXETG00000025903	ddx52	100	71.986	ENSGGOG00000028224	DDX52	97	72.081	Gorilla_gorilla
ENSXETG00000025903	ddx52	89	69.643	ENSHBUG00000015638	ddx52	87	63.320	Haplochromis_burtoni
ENSXETG00000025903	ddx52	87	60.583	ENSHGLG00000019205	-	93	72.393	Heterocephalus_glaber_female
ENSXETG00000025903	ddx52	99	71.550	ENSHGLG00000006235	-	99	70.079	Heterocephalus_glaber_female
ENSXETG00000025903	ddx52	75	81.591	ENSHGLG00100013765	-	84	81.068	Heterocephalus_glaber_male
ENSXETG00000025903	ddx52	75	72.393	ENSHGLG00100018699	-	94	72.393	Heterocephalus_glaber_male
ENSXETG00000025903	ddx52	86	72.772	ENSHCOG00000007966	ddx52	95	72.772	Hippocampus_comes
ENSXETG00000025903	ddx52	77	73.913	ENSIPUG00000008623	ddx52	98	62.132	Ictalurus_punctatus
ENSXETG00000025903	ddx52	57	80.812	ENSSTOG00000002550	DDX52	93	93.548	Ictidomys_tridecemlineatus
ENSXETG00000025903	ddx52	100	71.307	ENSJJAG00000021877	Ddx52	97	85.714	Jaculus_jaculus
ENSXETG00000025903	ddx52	99	61.785	ENSKMAG00000022270	ddx52	94	75.377	Kryptolebias_marmoratus
ENSXETG00000025903	ddx52	99	59.866	ENSLBEG00000015403	ddx52	89	62.738	Labrus_bergylta
ENSXETG00000025903	ddx52	99	72.213	ENSLACG00000012514	DDX52	94	82.353	Latimeria_chalumnae
ENSXETG00000025903	ddx52	78	78.161	ENSLOCG00000005928	ddx52	97	71.000	Lepisosteus_oculatus
ENSXETG00000025903	ddx52	86	85.714	ENSLAFG00000002635	DDX52	100	85.714	Loxodonta_africana
ENSXETG00000025903	ddx52	100	71.284	ENSMFAG00000000640	DDX52	97	71.525	Macaca_fascicularis
ENSXETG00000025903	ddx52	100	71.284	ENSMMUG00000002980	DDX52	97	71.525	Macaca_mulatta
ENSXETG00000025903	ddx52	100	71.115	ENSMNEG00000043658	DDX52	97	71.356	Macaca_nemestrina
ENSXETG00000025903	ddx52	100	71.891	ENSMLEG00000017518	DDX52	97	71.356	Mandrillus_leucophaeus
ENSXETG00000025903	ddx52	99	62.248	ENSMAMG00000019719	ddx52	87	62.595	Mastacembelus_armatus
ENSXETG00000025903	ddx52	99	59.339	ENSMZEG00005019044	ddx52	87	63.320	Maylandia_zebra
ENSXETG00000025903	ddx52	82	83.251	ENSMGAG00000008091	DDX52	95	83.251	Meleagris_gallopavo
ENSXETG00000025903	ddx52	100	70.918	ENSMAUG00000021084	Ddx52	97	70.918	Mesocricetus_auratus
ENSXETG00000025903	ddx52	99	65.470	ENSMICG00000004290	-	99	64.555	Microcebus_murinus
ENSXETG00000025903	ddx52	100	72.203	ENSMOCG00000009654	Ddx52	97	72.075	Microtus_ochrogaster
ENSXETG00000025903	ddx52	86	75.000	ENSMMOG00000018825	ddx52	88	75.879	Mola_mola
ENSXETG00000025903	ddx52	100	71.332	ENSMODG00000002493	DDX52	97	83.495	Monodelphis_domestica
ENSXETG00000025903	ddx52	82	66.461	ENSMALG00000007621	ddx52	82	66.393	Monopterus_albus
ENSXETG00000025903	ddx52	100	72.279	MGP_CAROLIEiJ_G0016888	Ddx52	97	72.279	Mus_caroli
ENSXETG00000025903	ddx52	100	71.743	ENSMUSG00000020677	Ddx52	97	71.743	Mus_musculus
ENSXETG00000025903	ddx52	100	71.622	MGP_PahariEiJ_G0018018	Ddx52	97	71.477	Mus_pahari
ENSXETG00000025903	ddx52	100	71.912	MGP_SPRETEiJ_G0017733	Ddx52	97	71.912	Mus_spretus
ENSXETG00000025903	ddx52	100	73.311	ENSMPUG00000015007	DDX52	97	72.635	Mustela_putorius_furo
ENSXETG00000025903	ddx52	100	71.356	ENSMLUG00000007167	-	97	71.356	Myotis_lucifugus
ENSXETG00000025903	ddx52	81	80.503	ENSMLUG00000024480	-	97	80.503	Myotis_lucifugus
ENSXETG00000025903	ddx52	100	72.034	ENSNGAG00000020686	Ddx52	98	71.864	Nannospalax_galili
ENSXETG00000025903	ddx52	85	64.859	ENSNBRG00000007750	ddx52	84	74.747	Neolamprologus_brichardi
ENSXETG00000025903	ddx52	100	72.034	ENSNLEG00000002826	DDX52	97	71.647	Nomascus_leucogenys
ENSXETG00000025903	ddx52	64	84.492	ENSMEUG00000011234	DDX52	96	82.927	Notamacropus_eugenii
ENSXETG00000025903	ddx52	100	62.373	ENSOPRG00000003899	DDX52	97	64.062	Ochotona_princeps
ENSXETG00000025903	ddx52	99	69.707	ENSODEG00000002857	-	87	80.167	Octodon_degus
ENSXETG00000025903	ddx52	86	85.222	ENSODEG00000012814	-	100	85.222	Octodon_degus
ENSXETG00000025903	ddx52	99	61.383	ENSONIG00000004869	ddx52	94	74.747	Oreochromis_niloticus
ENSXETG00000025903	ddx52	82	82.326	ENSOANG00000007133	DDX52	78	94.262	Ornithorhynchus_anatinus
ENSXETG00000025903	ddx52	100	71.939	ENSOCUG00000014532	DDX52	97	71.259	Oryctolagus_cuniculus
ENSXETG00000025903	ddx52	85	78.680	ENSORLG00000005241	ddx52	91	76.077	Oryzias_latipes
ENSXETG00000025903	ddx52	85	78.680	ENSORLG00015015546	ddx52	88	76.077	Oryzias_latipes_hsok
ENSXETG00000025903	ddx52	99	61.158	ENSOMEG00000017602	ddx52	90	66.932	Oryzias_melastigma
ENSXETG00000025903	ddx52	100	67.337	ENSOGAG00000000868	DDX52	99	67.572	Otolemur_garnettii
ENSXETG00000025903	ddx52	100	72.326	ENSOARG00000002998	DDX52	97	72.326	Ovis_aries
ENSXETG00000025903	ddx52	100	72.402	ENSPPAG00000028453	DDX52	97	72.402	Pan_paniscus
ENSXETG00000025903	ddx52	100	73.254	ENSPPRG00000009742	DDX52	97	73.083	Panthera_pardus
ENSXETG00000025903	ddx52	100	73.083	ENSPTIG00000013697	DDX52	97	85.714	Panthera_tigris_altaica
ENSXETG00000025903	ddx52	100	72.326	ENSPTRG00000009058	DDX52	97	71.986	Pan_troglodytes
ENSXETG00000025903	ddx52	100	70.946	ENSPANG00000022101	DDX52	97	84.729	Papio_anubis
ENSXETG00000025903	ddx52	100	61.111	ENSPKIG00000013058	ddx52	98	67.460	Paramormyrops_kingsleyae
ENSXETG00000025903	ddx52	99	72.089	ENSPSIG00000010226	DDX52	97	74.502	Pelodiscus_sinensis
ENSXETG00000025903	ddx52	85	64.056	ENSPMGG00000005458	ddx52	94	72.195	Periophthalmus_magnuspinnatus
ENSXETG00000025903	ddx52	100	72.881	ENSPEMG00000003263	Ddx52	97	72.279	Peromyscus_maniculatus_bairdii
ENSXETG00000025903	ddx52	89	82.160	ENSPCIG00000017730	DDX52	89	83.495	Phascolarctos_cinereus
ENSXETG00000025903	ddx52	99	62.162	ENSPFOG00000018378	ddx52	89	75.879	Poecilia_formosa
ENSXETG00000025903	ddx52	85	76.142	ENSPLAG00000008368	ddx52	89	75.879	Poecilia_latipinna
ENSXETG00000025903	ddx52	99	62.162	ENSPMEG00000002359	ddx52	89	75.879	Poecilia_mexicana
ENSXETG00000025903	ddx52	85	75.635	ENSPREG00000016874	ddx52	89	75.377	Poecilia_reticulata
ENSXETG00000025903	ddx52	100	71.647	ENSPPYG00000008221	DDX52	97	71.743	Pongo_abelii
ENSXETG00000025903	ddx52	99	63.149	ENSPCAG00000005814	DDX52	97	64.045	Procavia_capensis
ENSXETG00000025903	ddx52	100	72.635	ENSPVAG00000010462	DDX52	97	72.635	Pteropus_vampyrus
ENSXETG00000025903	ddx52	99	60.997	ENSPNYG00000020730	ddx52	96	74.747	Pundamilia_nyererei
ENSXETG00000025903	ddx52	92	76.531	ENSPNAG00000014707	ddx52	96	75.610	Pygocentrus_nattereri
ENSXETG00000025903	ddx52	100	71.817	ENSRNOG00000002612	Ddx52	97	71.477	Rattus_norvegicus
ENSXETG00000025903	ddx52	87	82.710	ENSRBIG00000032462	DDX52	97	84.729	Rhinopithecus_bieti
ENSXETG00000025903	ddx52	100	65.878	ENSRROG00000034760	DDX52	97	70.149	Rhinopithecus_roxellana
ENSXETG00000025903	ddx52	99	40.100	YGL171W	-	78	45.212	Saccharomyces_cerevisiae
ENSXETG00000025903	ddx52	100	71.550	ENSSBOG00000035787	DDX52	97	71.550	Saimiri_boliviensis_boliviensis
ENSXETG00000025903	ddx52	99	71.769	ENSSHAG00000013962	DDX52	96	82.927	Sarcophilus_harrisii
ENSXETG00000025903	ddx52	100	63.203	ENSSFOG00015005055	ddx52	99	63.806	Scleropages_formosus
ENSXETG00000025903	ddx52	85	77.157	ENSSMAG00000009788	ddx52	90	76.884	Scophthalmus_maximus
ENSXETG00000025903	ddx52	85	75.635	ENSSDUG00000004022	ddx52	90	62.738	Seriola_dumerili
ENSXETG00000025903	ddx52	85	76.142	ENSSLDG00000016999	ddx52	83	75.879	Seriola_lalandi_dorsalis
ENSXETG00000025903	ddx52	78	88.489	ENSSARG00000000371	-	65	88.489	Sorex_araneus
ENSXETG00000025903	ddx52	88	82.775	ENSSPUG00000000720	DDX52	96	82.110	Sphenodon_punctatus
ENSXETG00000025903	ddx52	85	76.650	ENSSPAG00000014211	ddx52	86	75.243	Stegastes_partitus
ENSXETG00000025903	ddx52	100	72.635	ENSSSCG00000021275	DDX52	97	71.647	Sus_scrofa
ENSXETG00000025903	ddx52	99	69.283	ENSTGUG00000008303	-	100	76.190	Taeniopygia_guttata
ENSXETG00000025903	ddx52	99	62.395	ENSTRUG00000017071	ddx52	86	63.118	Takifugu_rubripes
ENSXETG00000025903	ddx52	85	77.041	ENSTNIG00000009990	ddx52	98	64.259	Tetraodon_nigroviridis
ENSXETG00000025903	ddx52	79	62.722	ENSTBEG00000005982	DDX52	76	62.722	Tupaia_belangeri
ENSXETG00000025903	ddx52	100	72.881	ENSTTRG00000008917	DDX52	97	72.326	Tursiops_truncatus
ENSXETG00000025903	ddx52	99	71.769	ENSVPAG00000001979	DDX52	96	86.500	Vicugna_pacos
ENSXETG00000025903	ddx52	100	72.973	ENSVVUG00000020209	DDX52	98	88.824	Vulpes_vulpes
ENSXETG00000025903	ddx52	85	76.142	ENSXMAG00000010805	ddx52	90	75.879	Xiphophorus_maculatus