EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSXETG00000025924 (Gene tree)
Gene ID: -
Gene Symbol: rad54b
Alias: -
Full Name: RAD54 homolog B
Gene Type: protein_coding
Species: Xenopus_tropicalis
Status: putative
Strand: Plus strand
Length: 38838 bases
Position: chrGL172732.1:1121234-1160071
Accession: XB-GENE-5839240
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSXETP00000061755	ResIII	PF04851.15	3e-11	1	1
ENSXETP00000032142	ResIII	PF04851.15	3.3e-11	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSXETT00000062281	-	2343	-	ENSXETP00000061755	781 (aa)	-	F6PJY3
ENSXETT00000032142	-	2682	-	ENSXETP00000032142	893 (aa)	-	F7CIM9

Gene Model

Click here to download ENSXETG00000025924's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSXETG00000025924's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSXETG00000025924	rad54b	86	34.192	ENSXETG00000004369	rad54l	93	34.233

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSXETG00000025924	rad54b	99	59.551	ENSG00000197275	RAD54B	99	54.526	Homo_sapiens
ENSXETG00000025924	rad54b	90	58.654	ENSG00000265817	FSBP	99	58.654	Homo_sapiens
ENSXETG00000025924	rad54b	99	59.776	ENSAMEG00000005834	-	99	55.763	Ailuropoda_melanoleuca
ENSXETG00000025924	rad54b	98	53.291	ENSACIG00000013005	rad54b	99	48.842	Amphilophus_citrinellus
ENSXETG00000025924	rad54b	98	53.226	ENSAOCG00000008523	rad54b	99	48.093	Amphiprion_ocellaris
ENSXETG00000025924	rad54b	98	52.405	ENSAPEG00000001673	rad54b	99	48.376	Amphiprion_percula
ENSXETG00000025924	rad54b	99	52.736	ENSATEG00000001527	rad54b	99	49.390	Anabas_testudineus
ENSXETG00000025924	rad54b	99	60.908	ENSAPLG00000014366	-	99	56.358	Anas_platyrhynchos
ENSXETG00000025924	rad54b	99	60.025	ENSACAG00000003671	-	98	60.076	Anolis_carolinensis
ENSXETG00000025924	rad54b	80	57.604	ENSANAG00000019528	-	99	57.515	Aotus_nancymaae
ENSXETG00000025924	rad54b	98	52.830	ENSACLG00000007826	rad54b	99	48.661	Astatotilapia_calliptera
ENSXETG00000025924	rad54b	97	50.566	ENSAMXG00000039985	rad54b	94	50.125	Astyanax_mexicanus
ENSXETG00000025924	rad54b	99	59.102	ENSBTAG00000000632	RAD54B	99	54.665	Bos_taurus
ENSXETG00000025924	rad54b	89	30.178	WBGene00013792	Y116A8C.13	67	51.190	Caenorhabditis_elegans
ENSXETG00000025924	rad54b	99	59.426	ENSCJAG00000000080	-	99	58.379	Callithrix_jacchus
ENSXETG00000025924	rad54b	99	59.250	ENSCAFG00000009179	RAD54B	99	54.885	Canis_familiaris
ENSXETG00000025924	rad54b	99	59.125	ENSCAFG00020012084	-	99	54.775	Canis_lupus_dingo
ENSXETG00000025924	rad54b	99	59.102	ENSCHIG00000008230	-	99	54.835	Capra_hircus
ENSXETG00000025924	rad54b	99	60.723	ENSTSYG00000013234	-	99	55.338	Carlito_syrichta
ENSXETG00000025924	rad54b	99	59.398	ENSCPOG00000011643	-	99	55.184	Cavia_porcellus
ENSXETG00000025924	rad54b	99	59.551	ENSCCAG00000011754	-	99	58.516	Cebus_capucinus
ENSXETG00000025924	rad54b	99	59.500	ENSCATG00000030661	-	99	58.597	Cercocebus_atys
ENSXETG00000025924	rad54b	99	59.352	ENSCLAG00000010476	-	99	56.215	Chinchilla_lanigera
ENSXETG00000025924	rad54b	99	59.625	ENSCSAG00000012712	-	99	54.595	Chlorocebus_sabaeus
ENSXETG00000025924	rad54b	99	60.843	ENSCPBG00000003204	-	99	57.290	Chrysemys_picta_bellii
ENSXETG00000025924	rad54b	99	59.750	ENSCANG00000017939	-	99	58.735	Colobus_angolensis_palliatus
ENSXETG00000025924	rad54b	99	58.012	ENSCGRG00001020184	Rad54b	99	54.394	Cricetulus_griseus_chok1gshd
ENSXETG00000025924	rad54b	99	56.894	ENSCGRG00000016752	Rad54b	99	53.504	Cricetulus_griseus_crigri
ENSXETG00000025924	rad54b	99	51.601	ENSCSEG00000001601	rad54b	99	48.226	Cynoglossus_semilaevis
ENSXETG00000025924	rad54b	98	54.329	ENSCVAG00000009200	rad54b	99	51.441	Cyprinodon_variegatus
ENSXETG00000025924	rad54b	99	51.810	ENSDARG00000092134	rad54b	99	51.524	Danio_rerio
ENSXETG00000025924	rad54b	99	59.051	ENSDNOG00000015535	-	99	54.348	Dasypus_novemcinctus
ENSXETG00000025924	rad54b	99	57.947	ENSDORG00000002492	Rad54b	99	54.384	Dipodomys_ordii
ENSXETG00000025924	rad54b	85	59.352	ENSETEG00000010605	-	100	54.003	Echinops_telfairi
ENSXETG00000025924	rad54b	99	44.390	ENSEBUG00000009104	rad54b	87	47.953	Eptatretus_burgeri
ENSXETG00000025924	rad54b	99	59.102	ENSEASG00005004021	-	97	55.287	Equus_asinus_asinus
ENSXETG00000025924	rad54b	99	59.227	ENSECAG00000021949	-	99	55.131	Equus_caballus
ENSXETG00000025924	rad54b	75	75.000	ENSEEUG00000008056	-	74	75.000	Erinaceus_europaeus
ENSXETG00000025924	rad54b	98	52.055	ENSELUG00000009287	rad54b	99	46.362	Esox_lucius
ENSXETG00000025924	rad54b	99	60.100	ENSFCAG00000015513	-	99	59.122	Felis_catus
ENSXETG00000025924	rad54b	99	60.075	ENSFALG00000005467	-	99	55.065	Ficedula_albicollis
ENSXETG00000025924	rad54b	99	60.224	ENSFDAG00000020541	-	99	55.592	Fukomys_damarensis
ENSXETG00000025924	rad54b	98	51.545	ENSFHEG00000014382	rad54b	86	51.365	Fundulus_heteroclitus
ENSXETG00000025924	rad54b	97	50.758	ENSGMOG00000014774	rad54b	98	50.758	Gadus_morhua
ENSXETG00000025924	rad54b	99	58.758	ENSGALG00000043597	RAD54B	99	55.471	Gallus_gallus
ENSXETG00000025924	rad54b	98	54.625	ENSGAFG00000007901	rad54b	99	50.554	Gambusia_affinis
ENSXETG00000025924	rad54b	98	52.120	ENSGACG00000009128	rad54b	99	47.135	Gasterosteus_aculeatus
ENSXETG00000025924	rad54b	99	60.988	ENSGAGG00000018747	-	100	57.082	Gopherus_agassizii
ENSXETG00000025924	rad54b	99	59.551	ENSGGOG00000023516	-	99	54.705	Gorilla_gorilla
ENSXETG00000025924	rad54b	98	52.750	ENSHBUG00000016017	rad54b	99	47.034	Haplochromis_burtoni
ENSXETG00000025924	rad54b	99	58.663	ENSHGLG00000008263	RAD54B	99	54.754	Heterocephalus_glaber_female
ENSXETG00000025924	rad54b	99	57.862	ENSHGLG00100008108	-	99	54.072	Heterocephalus_glaber_male
ENSXETG00000025924	rad54b	99	50.250	ENSHCOG00000004764	rad54b	100	47.735	Hippocampus_comes
ENSXETG00000025924	rad54b	98	49.136	ENSIPUG00000018531	rad54b	99	45.331	Ictalurus_punctatus
ENSXETG00000025924	rad54b	99	59.119	ENSSTOG00000010791	-	99	54.586	Ictidomys_tridecemlineatus
ENSXETG00000025924	rad54b	99	58.971	ENSJJAG00000010314	Rad54b	99	54.526	Jaculus_jaculus
ENSXETG00000025924	rad54b	97	53.964	ENSKMAG00000004744	rad54b	99	49.330	Kryptolebias_marmoratus
ENSXETG00000025924	rad54b	87	69.231	ENSLACG00000000859	-	100	60.505	Latimeria_chalumnae
ENSXETG00000025924	rad54b	99	56.188	ENSLOCG00000010100	rad54b	97	53.088	Lepisosteus_oculatus
ENSXETG00000025924	rad54b	99	58.668	ENSLAFG00000015315	-	98	58.668	Loxodonta_africana
ENSXETG00000025924	rad54b	99	59.375	ENSMFAG00000031629	-	99	58.459	Macaca_fascicularis
ENSXETG00000025924	rad54b	99	59.375	ENSMMUG00000005659	-	99	54.376	Macaca_mulatta
ENSXETG00000025924	rad54b	99	59.375	ENSMNEG00000016408	-	99	54.436	Macaca_nemestrina
ENSXETG00000025924	rad54b	99	59.500	ENSMLEG00000006946	-	99	54.486	Mandrillus_leucophaeus
ENSXETG00000025924	rad54b	99	52.410	ENSMAMG00000012269	rad54b	99	48.415	Mastacembelus_armatus
ENSXETG00000025924	rad54b	98	52.889	ENSMZEG00005005281	rad54b	95	52.956	Maylandia_zebra
ENSXETG00000025924	rad54b	99	59.623	ENSMGAG00000012024	-	99	56.000	Meleagris_gallopavo
ENSXETG00000025924	rad54b	99	58.281	ENSMAUG00000013586	Rad54b	99	54.495	Mesocricetus_auratus
ENSXETG00000025924	rad54b	99	59.548	ENSMICG00000000754	-	99	54.060	Microcebus_murinus
ENSXETG00000025924	rad54b	99	57.591	ENSMOCG00000020035	Rad54b	99	53.084	Microtus_ochrogaster
ENSXETG00000025924	rad54b	98	51.870	ENSMMOG00000003394	rad54b	99	48.401	Mola_mola
ENSXETG00000025924	rad54b	98	59.898	ENSMODG00000007343	-	99	58.281	Monodelphis_domestica
ENSXETG00000025924	rad54b	80	51.398	ENSMALG00000001520	rad54b	99	51.398	Monopterus_albus
ENSXETG00000025924	rad54b	99	57.553	MGP_CAROLIEiJ_G0025810	Rad54b	99	53.244	Mus_caroli
ENSXETG00000025924	rad54b	99	57.179	ENSMUSG00000078773	Rad54b	99	53.274	Mus_musculus
ENSXETG00000025924	rad54b	99	56.592	MGP_PahariEiJ_G0023933	Rad54b	99	54.129	Mus_pahari
ENSXETG00000025924	rad54b	99	57.431	MGP_SPRETEiJ_G0026758	Rad54b	99	53.803	Mus_spretus
ENSXETG00000025924	rad54b	99	59.800	ENSMPUG00000008878	-	98	59.800	Mustela_putorius_furo
ENSXETG00000025924	rad54b	99	59.148	ENSMLUG00000008953	-	99	54.984	Myotis_lucifugus
ENSXETG00000025924	rad54b	99	58.540	ENSNGAG00000017537	Rad54b	99	53.956	Nannospalax_galili
ENSXETG00000025924	rad54b	98	52.956	ENSNBRG00000013394	rad54b	99	48.884	Neolamprologus_brichardi
ENSXETG00000025924	rad54b	99	59.426	ENSNLEG00000003062	-	99	58.516	Nomascus_leucogenys
ENSXETG00000025924	rad54b	74	66.754	ENSMEUG00000012426	-	65	66.754	Notamacropus_eugenii
ENSXETG00000025924	rad54b	99	59.398	ENSODEG00000019564	-	99	55.260	Octodon_degus
ENSXETG00000025924	rad54b	87	75.926	ENSODEG00000002650	-	94	75.926	Octodon_degus
ENSXETG00000025924	rad54b	98	53.141	ENSONIG00000006067	rad54b	99	47.883	Oreochromis_niloticus
ENSXETG00000025924	rad54b	93	59.867	ENSOANG00000011348	-	99	60.000	Ornithorhynchus_anatinus
ENSXETG00000025924	rad54b	99	58.801	ENSOCUG00000016478	-	99	54.015	Oryctolagus_cuniculus
ENSXETG00000025924	rad54b	98	53.759	ENSORLG00000008918	rad54b	99	52.851	Oryzias_latipes
ENSXETG00000025924	rad54b	80	52.851	ENSORLG00020012171	rad54b	99	52.851	Oryzias_latipes_hni
ENSXETG00000025924	rad54b	98	53.392	ENSORLG00015018536	rad54b	99	47.396	Oryzias_latipes_hsok
ENSXETG00000025924	rad54b	96	53.411	ENSOMEG00000004345	rad54b	99	53.085	Oryzias_melastigma
ENSXETG00000025924	rad54b	99	58.794	ENSOGAG00000007854	-	99	53.930	Otolemur_garnettii
ENSXETG00000025924	rad54b	99	58.582	ENSOARG00000007691	-	98	58.582	Ovis_aries
ENSXETG00000025924	rad54b	99	59.269	ENSPPAG00000029572	-	99	54.258	Pan_paniscus
ENSXETG00000025924	rad54b	99	60.224	ENSPPRG00000007571	-	99	59.259	Panthera_pardus
ENSXETG00000025924	rad54b	90	59.259	ENSPTIG00000012670	-	99	59.259	Panthera_tigris_altaica
ENSXETG00000025924	rad54b	99	59.426	ENSPTRG00000020427	-	99	58.516	Pan_troglodytes
ENSXETG00000025924	rad54b	99	59.500	ENSPANG00000019566	-	99	54.486	Papio_anubis
ENSXETG00000025924	rad54b	99	53.021	ENSPKIG00000014974	rad54b	99	49.196	Paramormyrops_kingsleyae
ENSXETG00000025924	rad54b	99	61.166	ENSPSIG00000002383	-	97	61.166	Pelodiscus_sinensis
ENSXETG00000025924	rad54b	99	57.410	ENSPEMG00000012133	Rad54b	99	53.548	Peromyscus_maniculatus_bairdii
ENSXETG00000025924	rad54b	98	52.222	ENSPMAG00000002916	rad54b	99	51.673	Petromyzon_marinus
ENSXETG00000025924	rad54b	99	60.500	ENSPCIG00000020151	-	93	60.125	Phascolarctos_cinereus
ENSXETG00000025924	rad54b	98	54.261	ENSPFOG00000023411	rad54b	99	49.097	Poecilia_formosa
ENSXETG00000025924	rad54b	98	54.648	ENSPLAG00000010430	rad54b	99	49.097	Poecilia_latipinna
ENSXETG00000025924	rad54b	98	54.899	ENSPMEG00000016873	rad54b	99	50.557	Poecilia_mexicana
ENSXETG00000025924	rad54b	98	54.397	ENSPREG00000018443	rad54b	99	51.002	Poecilia_reticulata
ENSXETG00000025924	rad54b	99	59.426	ENSPPYG00000018750	-	99	54.645	Pongo_abelii
ENSXETG00000025924	rad54b	99	59.601	ENSPCOG00000026845	-	99	58.299	Propithecus_coquereli
ENSXETG00000025924	rad54b	93	57.923	ENSPVAG00000000261	-	86	57.923	Pteropus_vampyrus
ENSXETG00000025924	rad54b	99	53.015	ENSPNYG00000018303	rad54b	96	53.015	Pundamilia_nyererei
ENSXETG00000025924	rad54b	99	51.066	ENSPNAG00000000295	rad54b	97	70.000	Pygocentrus_nattereri
ENSXETG00000025924	rad54b	99	56.713	ENSRNOG00000039949	Rad54b	99	53.184	Rattus_norvegicus
ENSXETG00000025924	rad54b	99	59.375	ENSRBIG00000020419	-	99	54.376	Rhinopithecus_bieti
ENSXETG00000025924	rad54b	99	59.375	ENSRROG00000039897	-	99	54.376	Rhinopithecus_roxellana
ENSXETG00000025924	rad54b	90	30.457	YBR073W	RDH54	69	37.795	Saccharomyces_cerevisiae
ENSXETG00000025924	rad54b	99	59.301	ENSSBOG00000028501	-	99	54.208	Saimiri_boliviensis_boliviensis
ENSXETG00000025924	rad54b	99	60.125	ENSSHAG00000017038	-	99	55.203	Sarcophilus_harrisii
ENSXETG00000025924	rad54b	73	53.231	ENSSFOG00015008483	rad54b	91	53.231	Scleropages_formosus
ENSXETG00000025924	rad54b	98	52.956	ENSSMAG00000018659	rad54b	99	49.279	Scophthalmus_maximus
ENSXETG00000025924	rad54b	95	53.521	ENSSDUG00000001122	rad54b	96	47.273	Seriola_dumerili
ENSXETG00000025924	rad54b	98	53.292	ENSSLDG00000013787	rad54b	99	49.944	Seriola_lalandi_dorsalis
ENSXETG00000025924	rad54b	99	59.530	ENSSPUG00000016497	-	99	56.969	Sphenodon_punctatus
ENSXETG00000025924	rad54b	99	53.234	ENSSPAG00000012800	rad54b	99	49.013	Stegastes_partitus
ENSXETG00000025924	rad54b	99	59.497	ENSSSCG00000006101	-	98	59.222	Sus_scrofa
ENSXETG00000025924	rad54b	99	59.748	ENSTGUG00000011880	-	99	55.043	Taeniopygia_guttata
ENSXETG00000025924	rad54b	98	52.854	ENSTRUG00000010015	rad54b	99	47.341	Takifugu_rubripes
ENSXETG00000025924	rad54b	99	56.015	ENSTTRG00000006312	-	99	52.580	Tursiops_truncatus
ENSXETG00000025924	rad54b	99	59.776	ENSUMAG00000016401	-	99	55.398	Ursus_maritimus
ENSXETG00000025924	rad54b	99	60.401	ENSVPAG00000003157	-	99	55.556	Vicugna_pacos
ENSXETG00000025924	rad54b	98	53.933	ENSXMAG00000013141	rad54b	99	50.496	Xiphophorus_maculatus