EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Orthologs

Description

Ensembl ID: ENSXETG00000026622 (Gene tree)
Gene ID: -
Gene Symbol: mbd4
Alias: -
Full Name: Xenopus tropicalis methyl-CpG binding domain 4%2C DNA glycosylase (mbd4)%2C mRNA.
Gene Type: protein_coding
Species: Xenopus_tropicalis
Status: putative
Strand: Minus strand
Length: 10404 bases
Position: chrGL172832.1:1570095-1580498
Accession: NM_001044451
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSXETP00000056046	MBD	PF01429.19	8.8e-18	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSXETT00000056046	-	1649	-	ENSXETP00000056046	474 (aa)	-	F7D9K1

Gene Model

Click here to download ENSXETG00000026622's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSXETG00000026622's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSXETG00000026622	mbd4	55	71.921	ENSG00000129071	MBD4	71	74.468	Homo_sapiens
ENSXETG00000026622	mbd4	89	44.880	ENSAPOG00000021668	mbd4	95	44.301	Acanthochromis_polyacanthus
ENSXETG00000026622	mbd4	89	42.826	ENSAPEG00000016131	mbd4	95	43.137	Amphiprion_percula
ENSXETG00000026622	mbd4	89	44.703	ENSATEG00000014594	MBD4	86	44.703	Anabas_testudineus
ENSXETG00000026622	mbd4	90	45.142	ENSACAG00000014733	MBD4	88	45.142	Anolis_carolinensis
ENSXETG00000026622	mbd4	90	43.590	ENSAMXG00000017271	mbd4	92	43.590	Astyanax_mexicanus
ENSXETG00000026622	mbd4	91	41.400	ENSCHIG00000009760	MBD4	87	41.400	Capra_hircus
ENSXETG00000026622	mbd4	89	41.722	ENSCATG00000035211	MBD4	83	41.722	Cercocebus_atys
ENSXETG00000026622	mbd4	90	43.883	ENSCPBG00000014704	MBD4	88	43.883	Chrysemys_picta_bellii
ENSXETG00000026622	mbd4	51	75.956	ENSCANG00000007120	MBD4	83	42.857	Colobus_angolensis_palliatus
ENSXETG00000026622	mbd4	89	45.661	ENSCGRG00001003507	Mbd4	86	46.074	Cricetulus_griseus_chok1gshd
ENSXETG00000026622	mbd4	89	45.661	ENSCGRG00000010974	Mbd4	86	46.074	Cricetulus_griseus_crigri
ENSXETG00000026622	mbd4	76	39.151	ENSDORG00000000902	-	88	39.151	Dipodomys_ordii
ENSXETG00000026622	mbd4	89	41.111	ENSEBUG00000010816	mbd4	99	41.111	Eptatretus_burgeri
ENSXETG00000026622	mbd4	68	77.457	ENSELUG00000018483	MBD4	53	77.457	Esox_lucius
ENSXETG00000026622	mbd4	85	46.567	ENSFALG00000013663	MBD4	100	46.058	Ficedula_albicollis
ENSXETG00000026622	mbd4	89	40.041	ENSGMOG00000013830	mbd4	100	40.041	Gadus_morhua
ENSXETG00000026622	mbd4	90	45.197	ENSGAFG00000016011	mbd4	99	45.197	Gambusia_affinis
ENSXETG00000026622	mbd4	76	36.512	ENSGACG00000001970	-	85	35.623	Gasterosteus_aculeatus
ENSXETG00000026622	mbd4	90	41.459	ENSGAGG00000018644	MBD4	89	41.459	Gopherus_agassizii
ENSXETG00000026622	mbd4	89	43.750	ENSSTOG00000020663	MBD4	86	43.750	Ictidomys_tridecemlineatus
ENSXETG00000026622	mbd4	91	41.632	ENSLBEG00000005669	MBD4	88	42.251	Labrus_bergylta
ENSXETG00000026622	mbd4	89	45.547	ENSLOCG00000013054	MBD4	99	46.278	Lepisosteus_oculatus
ENSXETG00000026622	mbd4	89	42.731	ENSMFAG00000002266	MBD4	83	43.207	Macaca_fascicularis
ENSXETG00000026622	mbd4	89	42.731	ENSMMUG00000012723	MBD4	83	43.207	Macaca_mulatta
ENSXETG00000026622	mbd4	85	40.835	ENSMNEG00000029752	MBD4	82	41.549	Macaca_nemestrina
ENSXETG00000026622	mbd4	89	41.722	ENSMLEG00000024859	MBD4	83	41.722	Mandrillus_leucophaeus
ENSXETG00000026622	mbd4	89	43.154	ENSMALG00000021517	mbd4	87	43.154	Monopterus_albus
ENSXETG00000026622	mbd4	89	45.885	ENSMUSG00000030322	Mbd4	87	45.885	Mus_musculus
ENSXETG00000026622	mbd4	89	53.750	ENSMPUG00000017195	MBD4	70	53.750	Mustela_putorius_furo
ENSXETG00000026622	mbd4	67	61.538	ENSMLUG00000014766	MBD4	59	61.538	Myotis_lucifugus
ENSXETG00000026622	mbd4	69	66.986	ENSOPRG00000000473	MBD4	56	66.986	Ochotona_princeps
ENSXETG00000026622	mbd4	89	46.847	ENSONIG00000017212	mbd4	100	46.847	Oreochromis_niloticus
ENSXETG00000026622	mbd4	89	43.084	ENSORLG00000011049	mbd4	97	43.084	Oryzias_latipes
ENSXETG00000026622	mbd4	89	42.857	ENSORLG00020020013	mbd4	97	42.857	Oryzias_latipes_hni
ENSXETG00000026622	mbd4	89	42.597	ENSORLG00015015342	mbd4	97	42.597	Oryzias_latipes_hsok
ENSXETG00000026622	mbd4	90	44.989	ENSOMEG00000008819	mbd4	92	44.989	Oryzias_melastigma
ENSXETG00000026622	mbd4	89	45.378	ENSOGAG00000010236	MBD4	86	45.378	Otolemur_garnettii
ENSXETG00000026622	mbd4	98	39.925	ENSOARG00000014699	MBD4	93	39.925	Ovis_aries
ENSXETG00000026622	mbd4	89	41.722	ENSPANG00000015047	MBD4	83	41.722	Papio_anubis
ENSXETG00000026622	mbd4	99	41.910	ENSPKIG00000012306	MBD4	83	41.910	Paramormyrops_kingsleyae
ENSXETG00000026622	mbd4	90	46.139	ENSPSIG00000007892	MBD4	88	46.139	Pelodiscus_sinensis
ENSXETG00000026622	mbd4	82	41.319	ENSPEMG00000006226	Mbd4	86	41.758	Peromyscus_maniculatus_bairdii
ENSXETG00000026622	mbd4	58	68.571	ENSPCIG00000002276	-	52	68.571	Phascolarctos_cinereus
ENSXETG00000026622	mbd4	89	43.636	ENSPFOG00000014471	mbd4	98	43.636	Poecilia_formosa
ENSXETG00000026622	mbd4	65	64.516	ENSPCAG00000012915	MBD4	68	64.516	Procavia_capensis
ENSXETG00000026622	mbd4	89	41.758	ENSRBIG00000027722	MBD4	83	41.758	Rhinopithecus_bieti
ENSXETG00000026622	mbd4	89	41.538	ENSRROG00000029136	MBD4	83	41.538	Rhinopithecus_roxellana
ENSXETG00000026622	mbd4	89	43.231	ENSSFOG00015016292	mbd4	95	43.231	Scleropages_formosus
ENSXETG00000026622	mbd4	90	43.601	ENSSMAG00000013958	-	68	42.979	Scophthalmus_maximus
ENSXETG00000026622	mbd4	89	44.592	ENSSDUG00000001365	mbd4	93	44.592	Seriola_dumerili
ENSXETG00000026622	mbd4	76	38.660	ENSSLDG00000010295	MBD4	80	38.660	Seriola_lalandi_dorsalis
ENSXETG00000026622	mbd4	58	74.619	ENSSPUG00000017344	MBD4	50	74.619	Sphenodon_punctatus
ENSXETG00000026622	mbd4	91	43.488	ENSTRUG00000010124	mbd4	98	43.488	Takifugu_rubripes
ENSXETG00000026622	mbd4	89	41.798	ENSTNIG00000017927	mbd4	100	41.798	Tetraodon_nigroviridis
ENSXETG00000026622	mbd4	89	43.863	ENSUAMG00000000814	MBD4	99	43.863	Ursus_americanus
ENSXETG00000026622	mbd4	89	42.981	ENSXMAG00000021129	mbd4	98	43.319	Xiphophorus_maculatus