EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Orthologs

Description

Ensembl ID: ENSXETG00000026649 (Gene tree)
Gene ID: -
Gene Symbol: rbm4b
Alias: -
Full Name: Xenopus tropicalis RNA binding motif protein 4B (rbm4b)%2C mRNA.
Gene Type: protein_coding
Species: Xenopus_tropicalis
Status: putative
Strand: Minus strand
Length: 8774 bases
Position: chrGL173264.1:108147-116920
Accession: NM_203873
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSXETP00000008271	zf-CCHC	PF00098.23	1.4e-07	1	1
ENSXETP00000008271	RRM_5	PF13893.6	1e-07	1	2
ENSXETP00000008271	RRM_5	PF13893.6	1e-07	2	2
ENSXETP00000008271	RRM_1	PF00076.22	1.8e-34	1	2
ENSXETP00000008271	RRM_1	PF00076.22	1.8e-34	2	2

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSXETT00000008271	-	1754	-	ENSXETP00000008271	338 (aa)	XP_012816217	Q6P4L3

Gene Model

Click here to download ENSXETG00000026649's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSXETG00000026649's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSXETG00000026649	rbm4b	94	43.716	ENSACLG00000007740	-	53	58.937	Astatotilapia_calliptera
ENSXETG00000026649	rbm4b	64	59.712	ENSAMXG00000032121	rbm4.2	87	59.712	Astyanax_mexicanus
ENSXETG00000026649	rbm4b	99	50.267	ENSAMXG00000036611	rbm4.1	86	53.271	Astyanax_mexicanus
ENSXETG00000026649	rbm4b	99	42.051	ENSDARG00000055080	rbm4.2	99	43.377	Danio_rerio
ENSXETG00000026649	rbm4b	99	61.086	ENSDARG00000036386	rbm4.1	99	61.086	Danio_rerio
ENSXETG00000026649	rbm4b	93	44.675	ENSEBUG00000007174	-	91	63.750	Eptatretus_burgeri
ENSXETG00000026649	rbm4b	52	63.536	ENSEBUG00000008142	-	73	50.558	Eptatretus_burgeri
ENSXETG00000026649	rbm4b	93	64.211	ENSELUG00000013205	rbm4.1	89	64.211	Esox_lucius
ENSXETG00000026649	rbm4b	89	45.170	ENSGMOG00000007455	-	83	46.541	Gadus_morhua
ENSXETG00000026649	rbm4b	94	49.235	ENSGACG00000000822	rbm4.1	81	65.922	Gasterosteus_aculeatus
ENSXETG00000026649	rbm4b	88	42.005	ENSHCOG00000011403	rbm4.1	83	65.363	Hippocampus_comes
ENSXETG00000026649	rbm4b	92	44.507	ENSIPUG00000022937	rbm4.2	81	45.277	Ictalurus_punctatus
ENSXETG00000026649	rbm4b	94	65.990	ENSIPUG00000022931	rbm4.1	88	67.188	Ictalurus_punctatus
ENSXETG00000026649	rbm4b	94	66.480	ENSKMAG00000006556	rbm4.1	95	66.480	Kryptolebias_marmoratus
ENSXETG00000026649	rbm4b	87	40.469	ENSKMAG00000006528	-	84	41.390	Kryptolebias_marmoratus
ENSXETG00000026649	rbm4b	93	44.167	ENSLBEG00000019756	-	86	60.145	Labrus_bergylta
ENSXETG00000026649	rbm4b	95	45.013	ENSMAMG00000001760	-	52	61.194	Mastacembelus_armatus
ENSXETG00000026649	rbm4b	94	46.175	ENSMALG00000020557	-	84	46.082	Monopterus_albus
ENSXETG00000026649	rbm4b	81	70.391	ENSPKIG00000020805	rbm4.1	99	67.391	Paramormyrops_kingsleyae
ENSXETG00000026649	rbm4b	60	51.707	ENSPMAG00000003433	rbm4.2	95	51.707	Petromyzon_marinus
ENSXETG00000026649	rbm4b	93	41.274	ENSPFOG00000012685	-	77	47.099	Poecilia_formosa
ENSXETG00000026649	rbm4b	93	43.082	ENSPREG00000003764	-	75	48.872	Poecilia_reticulata
ENSXETG00000026649	rbm4b	99	67.725	ENSPNAG00000002539	rbm4.1	88	66.497	Pygocentrus_nattereri
ENSXETG00000026649	rbm4b	96	44.624	ENSPNAG00000013057	rbm4.2	80	45.902	Pygocentrus_nattereri
ENSXETG00000026649	rbm4b	85	70.391	ENSSFOG00015021996	sf1	83	65.657	Scleropages_formosus
ENSXETG00000026649	rbm4b	93	44.658	ENSSDUG00000003936	-	83	45.625	Seriola_dumerili
ENSXETG00000026649	rbm4b	74	44.746	ENSSLDG00000013157	-	83	45.625	Seriola_lalandi_dorsalis
ENSXETG00000026649	rbm4b	94	42.896	ENSSPAG00000019046	-	84	43.125	Stegastes_partitus
ENSXETG00000026649	rbm4b	99	49.128	ENSTNIG00000004821	rbm4.1	75	53.101	Tetraodon_nigroviridis
ENSXETG00000026649	rbm4b	93	44.037	ENSXMAG00000008059	-	76	48.485	Xiphophorus_maculatus