EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Orthologs

Description

Ensembl ID: ENSXETG00000026859 (Gene tree)
Gene ID: -
Gene Symbol: utp3
Alias: -
Full Name: Xenopus tropicalis UTP3%2C small subunit processome component (utp3)%2C mRNA.
Gene Type: protein_coding
Species: Xenopus_tropicalis
Status: putative
Strand: Minus strand
Length: 18305 bases
Position: chrGL172893.1:715271-733575
Accession: NM_001126577
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSXETP00000056367	Sas10_Utp3	PF04000.15	6e-16	1	1
ENSXETP00000056368	Sas10_Utp3	PF04000.15	1.7e-15	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSXETT00000056367	-	1443	-	ENSXETP00000056367	461 (aa)	-	F7ET55
ENSXETT00000056368	-	1477	XM_012971526	ENSXETP00000056368	296 (aa)	XP_012826980	F7ET43

Gene Model

Click here to download ENSXETG00000026859's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSXETG00000026859's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSXETG00000026859	utp3	97	52.854	ENSG00000132467	UTP3	97	53.079	Homo_sapiens
ENSXETG00000026859	utp3	98	55.907	ENSAPOG00000018006	utp3	99	56.184	Acanthochromis_polyacanthus
ENSXETG00000026859	utp3	97	55.128	ENSAMEG00000019540	UTP3	97	54.140	Ailuropoda_melanoleuca
ENSXETG00000026859	utp3	98	53.617	ENSACIG00000010913	utp3	99	53.404	Amphilophus_citrinellus
ENSXETG00000026859	utp3	98	56.303	ENSAOCG00000016134	utp3	99	56.276	Amphiprion_ocellaris
ENSXETG00000026859	utp3	98	56.092	ENSAPEG00000003914	utp3	99	56.067	Amphiprion_percula
ENSXETG00000026859	utp3	95	55.066	ENSATEG00000024940	utp3	100	55.830	Anabas_testudineus
ENSXETG00000026859	utp3	91	57.401	ENSACAG00000012860	UTP3	93	54.955	Anolis_carolinensis
ENSXETG00000026859	utp3	93	54.626	ENSANAG00000031723	UTP3	93	55.727	Aotus_nancymaae
ENSXETG00000026859	utp3	98	58.439	ENSACLG00000015170	utp3	99	58.861	Astatotilapia_calliptera
ENSXETG00000026859	utp3	92	53.069	ENSAMXG00000032941	utp3	94	58.575	Astyanax_mexicanus
ENSXETG00000026859	utp3	92	54.691	ENSBTAG00000009310	UTP3	91	55.782	Bos_taurus
ENSXETG00000026859	utp3	86	54.440	ENSCJAG00000042824	UTP3	93	53.377	Callithrix_jacchus
ENSXETG00000026859	utp3	98	52.769	ENSCAFG00000002913	UTP3	92	55.902	Canis_familiaris
ENSXETG00000026859	utp3	98	49.007	ENSCAFG00020027071	UTP3	91	54.338	Canis_lupus_dingo
ENSXETG00000026859	utp3	92	54.920	ENSCHIG00000002276	UTP3	91	55.782	Capra_hircus
ENSXETG00000026859	utp3	98	52.508	ENSCPOG00000005869	UTP3	92	55.482	Cavia_porcellus
ENSXETG00000026859	utp3	97	53.846	ENSCCAG00000032341	UTP3	97	53.419	Cebus_capucinus
ENSXETG00000026859	utp3	97	53.503	ENSCATG00000016403	UTP3	97	53.715	Cercocebus_atys
ENSXETG00000026859	utp3	92	54.091	ENSCLAG00000017606	UTP3	92	55.227	Chinchilla_lanigera
ENSXETG00000026859	utp3	97	52.632	ENSCSAG00000000420	UTP3	97	53.361	Chlorocebus_sabaeus
ENSXETG00000026859	utp3	93	54.741	ENSCPBG00000019489	UTP3	94	55.603	Chrysemys_picta_bellii
ENSXETG00000026859	utp3	92	35.909	ENSCING00000007582	-	93	35.666	Ciona_intestinalis
ENSXETG00000026859	utp3	92	34.571	ENSCSAVG00000010608	-	93	33.566	Ciona_savignyi
ENSXETG00000026859	utp3	93	54.386	ENSCANG00000016915	UTP3	97	53.165	Colobus_angolensis_palliatus
ENSXETG00000026859	utp3	92	55.605	ENSCGRG00001001299	Utp3	92	56.278	Cricetulus_griseus_chok1gshd
ENSXETG00000026859	utp3	92	55.157	ENSCGRG00000019120	Utp3	92	56.278	Cricetulus_griseus_crigri
ENSXETG00000026859	utp3	88	47.170	ENSCSEG00000021698	utp3	91	53.631	Cynoglossus_semilaevis
ENSXETG00000026859	utp3	98	57.849	ENSCVAG00000011971	utp3	99	57.849	Cyprinodon_variegatus
ENSXETG00000026859	utp3	93	56.180	ENSDARG00000056720	utp3	93	56.404	Danio_rerio
ENSXETG00000026859	utp3	97	54.428	ENSDNOG00000002962	UTP3	97	54.428	Dasypus_novemcinctus
ENSXETG00000026859	utp3	97	53.518	ENSDORG00000023913	Utp3	96	53.763	Dipodomys_ordii
ENSXETG00000026859	utp3	79	38.400	FBgn0029755	Sas10	84	37.467	Drosophila_melanogaster
ENSXETG00000026859	utp3	98	38.737	ENSEBUG00000015686	utp3	99	39.331	Eptatretus_burgeri
ENSXETG00000026859	utp3	97	52.677	ENSEASG00005016702	UTP3	97	53.390	Equus_asinus_asinus
ENSXETG00000026859	utp3	97	53.105	ENSECAG00000005387	UTP3	97	53.390	Equus_caballus
ENSXETG00000026859	utp3	97	53.548	ENSELUG00000001527	utp3	98	53.390	Esox_lucius
ENSXETG00000026859	utp3	97	53.291	ENSFCAG00000007268	UTP3	97	53.928	Felis_catus
ENSXETG00000026859	utp3	94	53.767	ENSFALG00000014560	UTP3	79	59.173	Ficedula_albicollis
ENSXETG00000026859	utp3	92	57.631	ENSFHEG00000018565	utp3	86	57.175	Fundulus_heteroclitus
ENSXETG00000026859	utp3	84	53.470	ENSGMOG00000001824	utp3	99	55.076	Gadus_morhua
ENSXETG00000026859	utp3	92	54.577	ENSGALG00000047103	UTP3	73	59.481	Gallus_gallus
ENSXETG00000026859	utp3	98	56.092	ENSGAFG00000012330	utp3	99	55.882	Gambusia_affinis
ENSXETG00000026859	utp3	90	54.135	ENSGACG00000007417	utp3	96	56.790	Gasterosteus_aculeatus
ENSXETG00000026859	utp3	99	54.658	ENSGAGG00000003975	UTP3	97	54.906	Gopherus_agassizii
ENSXETG00000026859	utp3	97	53.390	ENSGGOG00000025335	UTP3	97	53.503	Gorilla_gorilla
ENSXETG00000026859	utp3	98	58.562	ENSHBUG00000003276	utp3	99	58.985	Haplochromis_burtoni
ENSXETG00000026859	utp3	92	54.147	ENSHGLG00000020163	UTP3	91	55.172	Heterocephalus_glaber_female
ENSXETG00000026859	utp3	92	54.147	ENSHGLG00100020125	UTP3	91	55.172	Heterocephalus_glaber_male
ENSXETG00000026859	utp3	93	54.102	ENSHCOG00000020540	utp3	98	53.363	Hippocampus_comes
ENSXETG00000026859	utp3	90	57.836	ENSIPUG00000014510	Utp3	94	56.319	Ictalurus_punctatus
ENSXETG00000026859	utp3	92	53.986	ENSSTOG00000029126	UTP3	92	54.670	Ictidomys_tridecemlineatus
ENSXETG00000026859	utp3	98	49.169	ENSJJAG00000014891	Utp3	97	54.095	Jaculus_jaculus
ENSXETG00000026859	utp3	98	55.000	ENSKMAG00000004879	utp3	99	54.772	Kryptolebias_marmoratus
ENSXETG00000026859	utp3	99	54.576	ENSLBEG00000024055	utp3	94	57.848	Labrus_bergylta
ENSXETG00000026859	utp3	98	57.652	ENSLACG00000009975	utp3	98	57.588	Latimeria_chalumnae
ENSXETG00000026859	utp3	91	57.778	ENSLOCG00000001449	utp3	99	62.398	Lepisosteus_oculatus
ENSXETG00000026859	utp3	92	53.226	ENSLAFG00000017017	UTP3	93	52.242	Loxodonta_africana
ENSXETG00000026859	utp3	97	52.731	ENSMFAG00000013579	UTP3	97	53.814	Macaca_fascicularis
ENSXETG00000026859	utp3	97	52.521	ENSMMUG00000014229	UTP3	97	53.602	Macaca_mulatta
ENSXETG00000026859	utp3	97	52.731	ENSMNEG00000005112	UTP3	97	53.814	Macaca_nemestrina
ENSXETG00000026859	utp3	97	53.178	ENSMLEG00000022236	UTP3	97	53.814	Mandrillus_leucophaeus
ENSXETG00000026859	utp3	98	56.394	ENSMAMG00000015467	utp3	99	57.023	Mastacembelus_armatus
ENSXETG00000026859	utp3	98	58.439	ENSMZEG00005014455	utp3	99	58.861	Maylandia_zebra
ENSXETG00000026859	utp3	92	55.357	ENSMGAG00000009998	UTP3	92	49.730	Meleagris_gallopavo
ENSXETG00000026859	utp3	92	54.628	ENSMAUG00000017935	Utp3	97	53.419	Mesocricetus_auratus
ENSXETG00000026859	utp3	92	55.157	ENSMOCG00000005434	Utp3	97	53.533	Microtus_ochrogaster
ENSXETG00000026859	utp3	99	53.041	ENSMMOG00000010804	utp3	88	58.010	Mola_mola
ENSXETG00000026859	utp3	91	53.812	ENSMODG00000019084	UTP3	96	54.741	Monodelphis_domestica
ENSXETG00000026859	utp3	98	53.846	ENSMALG00000003443	utp3	99	53.430	Monopterus_albus
ENSXETG00000026859	utp3	97	52.916	MGP_CAROLIEiJ_G0027375	Utp3	97	53.648	Mus_caroli
ENSXETG00000026859	utp3	92	55.581	ENSMUSG00000070697	Utp3	91	55.708	Mus_musculus
ENSXETG00000026859	utp3	77	55.365	MGP_PahariEiJ_G0017153	-	72	47.661	Mus_pahari
ENSXETG00000026859	utp3	92	55.353	MGP_SPRETEiJ_G0028372	Utp3	91	55.479	Mus_spretus
ENSXETG00000026859	utp3	97	54.140	ENSMPUG00000019074	UTP3	97	53.586	Mustela_putorius_furo
ENSXETG00000026859	utp3	92	55.357	ENSMLUG00000003722	UTP3	96	54.176	Myotis_lucifugus
ENSXETG00000026859	utp3	92	54.378	ENSNGAG00000012521	Utp3	92	55.353	Nannospalax_galili
ENSXETG00000026859	utp3	98	58.105	ENSNBRG00000020374	utp3	99	58.774	Neolamprologus_brichardi
ENSXETG00000026859	utp3	97	52.966	ENSNLEG00000018563	UTP3	97	52.766	Nomascus_leucogenys
ENSXETG00000026859	utp3	93	54.831	ENSODEG00000018723	UTP3	92	54.343	Octodon_degus
ENSXETG00000026859	utp3	98	58.105	ENSONIG00000003918	utp3	99	58.526	Oreochromis_niloticus
ENSXETG00000026859	utp3	73	81.176	ENSOANG00000013694	-	96	81.176	Ornithorhynchus_anatinus
ENSXETG00000026859	utp3	97	51.965	ENSOCUG00000010003	UTP3	96	51.747	Oryctolagus_cuniculus
ENSXETG00000026859	utp3	98	53.975	ENSORLG00000004019	utp3	99	55.297	Oryzias_latipes
ENSXETG00000026859	utp3	98	55.794	ENSORLG00020020306	utp3	99	55.342	Oryzias_latipes_hni
ENSXETG00000026859	utp3	98	53.750	ENSORLG00015016052	utp3	99	55.063	Oryzias_latipes_hsok
ENSXETG00000026859	utp3	98	54.852	ENSOMEG00000022073	utp3	99	54.545	Oryzias_melastigma
ENSXETG00000026859	utp3	92	52.876	ENSOGAG00000012878	UTP3	92	53.244	Otolemur_garnettii
ENSXETG00000026859	utp3	92	54.920	ENSOARG00000007800	UTP3	91	56.009	Ovis_aries
ENSXETG00000026859	utp3	97	52.854	ENSPPAG00000019684	UTP3	97	53.178	Pan_paniscus
ENSXETG00000026859	utp3	97	53.978	ENSPPRG00000015468	UTP3	97	54.371	Panthera_pardus
ENSXETG00000026859	utp3	92	55.909	ENSPTIG00000006703	UTP3	97	54.797	Panthera_tigris_altaica
ENSXETG00000026859	utp3	97	53.178	ENSPANG00000008263	UTP3	97	53.602	Papio_anubis
ENSXETG00000026859	utp3	95	55.120	ENSPKIG00000012883	utp3	96	56.087	Paramormyrops_kingsleyae
ENSXETG00000026859	utp3	92	56.537	ENSPSIG00000000105	UTP3	75	55.932	Pelodiscus_sinensis
ENSXETG00000026859	utp3	95	54.204	ENSPMGG00000023527	utp3	98	54.425	Periophthalmus_magnuspinnatus
ENSXETG00000026859	utp3	97	52.928	ENSPEMG00000019223	Utp3	97	54.936	Peromyscus_maniculatus_bairdii
ENSXETG00000026859	utp3	98	55.485	ENSPFOG00000014528	utp3	99	55.274	Poecilia_formosa
ENSXETG00000026859	utp3	98	55.158	ENSPLAG00000005600	utp3	99	54.947	Poecilia_latipinna
ENSXETG00000026859	utp3	98	55.603	ENSPMEG00000019359	utp3	99	55.391	Poecilia_mexicana
ENSXETG00000026859	utp3	98	55.391	ENSPREG00000005341	utp3	99	55.391	Poecilia_reticulata
ENSXETG00000026859	utp3	97	53.066	ENSPPYG00000014810	UTP3	97	53.178	Pongo_abelii
ENSXETG00000026859	utp3	94	52.412	ENSPCAG00000012879	UTP3	94	52.632	Procavia_capensis
ENSXETG00000026859	utp3	97	53.602	ENSPVAG00000004333	UTP3	97	53.586	Pteropus_vampyrus
ENSXETG00000026859	utp3	98	55.388	ENSPNYG00000017771	utp3	99	55.388	Pundamilia_nyererei
ENSXETG00000026859	utp3	98	53.750	ENSPNAG00000000182	utp3	99	54.167	Pygocentrus_nattereri
ENSXETG00000026859	utp3	92	54.483	ENSRNOG00000003599	Utp3	97	53.448	Rattus_norvegicus
ENSXETG00000026859	utp3	97	53.079	ENSRBIG00000030025	UTP3	97	53.079	Rhinopithecus_bieti
ENSXETG00000026859	utp3	97	53.079	ENSRROG00000006709	UTP3	97	53.079	Rhinopithecus_roxellana
ENSXETG00000026859	utp3	97	53.488	ENSSBOG00000019914	UTP3	97	53.782	Saimiri_boliviensis_boliviensis
ENSXETG00000026859	utp3	86	54.373	ENSSHAG00000018226	UTP3	93	54.565	Sarcophilus_harrisii
ENSXETG00000026859	utp3	95	55.705	ENSSFOG00015007775	utp3	95	55.705	Scleropages_formosus
ENSXETG00000026859	utp3	98	54.989	ENSSMAG00000015156	utp3	99	54.989	Scophthalmus_maximus
ENSXETG00000026859	utp3	98	56.900	ENSSDUG00000014843	utp3	99	56.900	Seriola_dumerili
ENSXETG00000026859	utp3	91	52.740	ENSSPUG00000007404	UTP3	78	56.298	Sphenodon_punctatus
ENSXETG00000026859	utp3	98	55.907	ENSSPAG00000007106	utp3	99	55.907	Stegastes_partitus
ENSXETG00000026859	utp3	98	50.000	ENSSSCG00000028466	UTP3	92	56.036	Sus_scrofa
ENSXETG00000026859	utp3	74	60.811	ENSTGUG00000001660	UTP3	100	53.546	Taeniopygia_guttata
ENSXETG00000026859	utp3	93	55.632	ENSTRUG00000014591	utp3	99	53.996	Takifugu_rubripes
ENSXETG00000026859	utp3	98	52.321	ENSTNIG00000014783	utp3	100	56.853	Tetraodon_nigroviridis
ENSXETG00000026859	utp3	97	53.518	ENSTTRG00000008390	UTP3	97	53.617	Tursiops_truncatus
ENSXETG00000026859	utp3	92	55.936	ENSUAMG00000008914	UTP3	92	56.561	Ursus_americanus
ENSXETG00000026859	utp3	92	56.164	ENSUMAG00000003743	UTP3	92	56.787	Ursus_maritimus
ENSXETG00000026859	utp3	97	50.974	ENSVVUG00000004285	UTP3	86	47.721	Vulpes_vulpes
ENSXETG00000026859	utp3	98	54.797	ENSXMAG00000017071	utp3	99	54.797	Xiphophorus_maculatus