EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Orthologs

Description

Ensembl ID: ENSXETG00000027218 (Gene tree)
Gene ID: -
Gene Symbol: sub1
Alias: -
Full Name: Xenopus tropicalis SUB1 homolog%2C transcriptional regulator (sub1)%2C mRNA.
Gene Type: protein_coding
Species: Xenopus_tropicalis
Status: putative
Strand: Minus strand
Length: 10319 bases
Position: chrGL172864.1:1659224-1669542
Accession: NM_001004871
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSXETP00000032004	PC4	PF02229.16	2.8e-24	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSXETT00000032004	-	2266	-	ENSXETP00000032004	128 (aa)	-	Q6DJR3

Gene Model

Click here to download ENSXETG00000027218's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSXETG00000027218's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSXETG00000027218	sub1	100	79.070	ENSG00000113387	SUB1	100	80.620	Homo_sapiens
ENSXETG00000027218	sub1	100	72.656	ENSAPOG00000005917	SUB1	100	68.750	Acanthochromis_polyacanthus
ENSXETG00000027218	sub1	100	79.070	ENSAMEG00000006238	SUB1	95	80.620	Ailuropoda_melanoleuca
ENSXETG00000027218	sub1	100	72.656	ENSACIG00000015976	sub1b	100	68.750	Amphilophus_citrinellus
ENSXETG00000027218	sub1	85	68.807	ENSAOCG00000002323	-	75	73.118	Amphiprion_ocellaris
ENSXETG00000027218	sub1	91	69.231	ENSAOCG00000007313	-	83	74.038	Amphiprion_ocellaris
ENSXETG00000027218	sub1	83	67.925	ENSAPEG00000017151	-	76	69.000	Amphiprion_percula
ENSXETG00000027218	sub1	100	73.438	ENSAPEG00000024347	sub1b	100	69.531	Amphiprion_percula
ENSXETG00000027218	sub1	51	70.769	ENSAPEG00000014618	-	62	70.769	Amphiprion_percula
ENSXETG00000027218	sub1	100	72.656	ENSATEG00000010340	sub1b	100	68.750	Anabas_testudineus
ENSXETG00000027218	sub1	100	75.188	ENSACAG00000007974	SUB1	100	75.188	Anolis_carolinensis
ENSXETG00000027218	sub1	100	80.469	ENSANAG00000023392	-	83	80.469	Aotus_nancymaae
ENSXETG00000027218	sub1	100	79.070	ENSANAG00000011651	-	100	80.620	Aotus_nancymaae
ENSXETG00000027218	sub1	100	72.656	ENSACLG00000016875	sub1b	64	68.750	Astatotilapia_calliptera
ENSXETG00000027218	sub1	100	75.969	ENSAMXG00000037104	sub1b	100	72.093	Astyanax_mexicanus
ENSXETG00000027218	sub1	100	79.070	ENSBTAG00000021965	SUB1	100	80.620	Bos_taurus
ENSXETG00000027218	sub1	75	39.175	WBGene00011743	T13F2.2	76	39.796	Caenorhabditis_elegans
ENSXETG00000027218	sub1	80	76.923	ENSCJAG00000018718	SUB1	98	78.846	Callithrix_jacchus
ENSXETG00000027218	sub1	100	79.070	ENSCAFG00000018879	-	88	80.620	Canis_familiaris
ENSXETG00000027218	sub1	91	74.138	ENSCAFG00000024488	-	86	75.455	Canis_familiaris
ENSXETG00000027218	sub1	100	79.070	ENSCAFG00000016713	-	96	80.620	Canis_familiaris
ENSXETG00000027218	sub1	100	79.231	ENSCAFG00020011479	-	77	79.231	Canis_lupus_dingo
ENSXETG00000027218	sub1	100	79.070	ENSCAFG00020016840	-	100	80.620	Canis_lupus_dingo
ENSXETG00000027218	sub1	100	79.070	ENSCHIG00000008460	SUB1	100	80.620	Capra_hircus
ENSXETG00000027218	sub1	100	69.767	ENSTSYG00000035366	-	83	71.318	Carlito_syrichta
ENSXETG00000027218	sub1	100	73.485	ENSTSYG00000014069	-	93	76.515	Carlito_syrichta
ENSXETG00000027218	sub1	100	79.070	ENSTSYG00000029948	-	100	80.620	Carlito_syrichta
ENSXETG00000027218	sub1	100	79.070	ENSCPOG00000031334	SUB1	100	80.620	Cavia_porcellus
ENSXETG00000027218	sub1	100	72.656	ENSCCAG00000017043	-	93	72.656	Cebus_capucinus
ENSXETG00000027218	sub1	100	74.419	ENSCCAG00000020604	-	100	75.969	Cebus_capucinus
ENSXETG00000027218	sub1	100	78.295	ENSCCAG00000033751	-	95	78.295	Cebus_capucinus
ENSXETG00000027218	sub1	100	79.070	ENSCCAG00000023605	-	100	80.620	Cebus_capucinus
ENSXETG00000027218	sub1	100	79.070	ENSCATG00000031199	SUB1	100	80.620	Cercocebus_atys
ENSXETG00000027218	sub1	100	77.692	ENSCLAG00000007522	SUB1	100	80.000	Chinchilla_lanigera
ENSXETG00000027218	sub1	100	77.519	ENSCSAG00000019449	-	100	77.519	Chlorocebus_sabaeus
ENSXETG00000027218	sub1	100	79.070	ENSCSAG00000017172	-	100	80.620	Chlorocebus_sabaeus
ENSXETG00000027218	sub1	100	83.594	ENSCPBG00000024218	SUB1	79	83.594	Chrysemys_picta_bellii
ENSXETG00000027218	sub1	100	79.070	ENSCANG00000029372	SUB1	100	80.620	Colobus_angolensis_palliatus
ENSXETG00000027218	sub1	100	67.969	ENSCANG00000028665	-	90	67.969	Colobus_angolensis_palliatus
ENSXETG00000027218	sub1	100	78.295	ENSCGRG00001003473	-	100	78.295	Cricetulus_griseus_chok1gshd
ENSXETG00000027218	sub1	100	64.885	ENSCGRG00001016254	-	100	64.885	Cricetulus_griseus_chok1gshd
ENSXETG00000027218	sub1	100	67.442	ENSCGRG00001014660	-	100	67.442	Cricetulus_griseus_chok1gshd
ENSXETG00000027218	sub1	100	66.667	ENSCGRG00000001489	-	100	66.667	Cricetulus_griseus_crigri
ENSXETG00000027218	sub1	100	67.442	ENSCGRG00000019368	-	100	67.442	Cricetulus_griseus_crigri
ENSXETG00000027218	sub1	100	78.295	ENSCGRG00000001133	-	100	78.295	Cricetulus_griseus_crigri
ENSXETG00000027218	sub1	99	75.591	ENSDARG00000053446	sub1a	100	71.094	Danio_rerio
ENSXETG00000027218	sub1	100	71.875	ENSDARG00000007720	sub1b	100	68.750	Danio_rerio
ENSXETG00000027218	sub1	100	76.744	ENSDNOG00000032396	-	100	78.295	Dasypus_novemcinctus
ENSXETG00000027218	sub1	100	78.295	ENSDNOG00000040794	-	100	79.845	Dasypus_novemcinctus
ENSXETG00000027218	sub1	100	79.845	ENSDORG00000013916	Sub1	100	79.845	Dipodomys_ordii
ENSXETG00000027218	sub1	79	51.485	ENSEBUG00000008746	sub1a	53	51.485	Eptatretus_burgeri
ENSXETG00000027218	sub1	100	79.070	ENSEASG00005007099	SUB1	100	80.620	Equus_asinus_asinus
ENSXETG00000027218	sub1	100	79.070	ENSECAG00000012399	SUB1	100	80.620	Equus_caballus
ENSXETG00000027218	sub1	81	76.190	ENSEEUG00000000436	SUB1	100	78.095	Erinaceus_europaeus
ENSXETG00000027218	sub1	100	79.070	ENSFCAG00000037288	SUB1	100	80.620	Felis_catus
ENSXETG00000027218	sub1	100	83.594	ENSFALG00000002143	SUB1	87	83.594	Ficedula_albicollis
ENSXETG00000027218	sub1	100	79.070	ENSFDAG00000017179	SUB1	100	80.620	Fukomys_damarensis
ENSXETG00000027218	sub1	100	81.250	ENSGALG00000034905	-	100	81.250	Gallus_gallus
ENSXETG00000027218	sub1	100	48.438	ENSGALG00000027147	-	100	49.219	Gallus_gallus
ENSXETG00000027218	sub1	100	84.375	ENSGALG00000003248	SUB1	100	84.375	Gallus_gallus
ENSXETG00000027218	sub1	100	71.875	ENSGACG00000003912	sub1b	100	67.969	Gasterosteus_aculeatus
ENSXETG00000027218	sub1	100	84.375	ENSGAGG00000013535	SUB1	100	84.375	Gopherus_agassizii
ENSXETG00000027218	sub1	100	79.070	ENSGGOG00000040900	SUB1	100	80.620	Gorilla_gorilla
ENSXETG00000027218	sub1	81	71.154	ENSHBUG00000013953	sub1b	78	71.154	Haplochromis_burtoni
ENSXETG00000027218	sub1	100	79.070	ENSHGLG00000006749	SUB1	100	80.620	Heterocephalus_glaber_female
ENSXETG00000027218	sub1	100	79.070	ENSHGLG00100014344	SUB1	100	80.620	Heterocephalus_glaber_male
ENSXETG00000027218	sub1	100	67.969	ENSHCOG00000001809	sub1b	100	64.062	Hippocampus_comes
ENSXETG00000027218	sub1	100	69.630	ENSIPUG00000024367	SUB1	100	65.926	Ictalurus_punctatus
ENSXETG00000027218	sub1	100	75.781	ENSIPUG00000008166	sub1	100	71.875	Ictalurus_punctatus
ENSXETG00000027218	sub1	100	78.295	ENSSTOG00000019364	SUB1	100	79.845	Ictidomys_tridecemlineatus
ENSXETG00000027218	sub1	100	75.969	ENSJJAG00000018885	Sub1	100	75.969	Jaculus_jaculus
ENSXETG00000027218	sub1	99	69.291	ENSLBEG00000010728	sub1b	100	67.969	Labrus_bergylta
ENSXETG00000027218	sub1	51	92.308	ENSLACG00000001068	SUB1	100	92.308	Latimeria_chalumnae
ENSXETG00000027218	sub1	100	73.438	ENSLOCG00000006692	sub1b	100	69.531	Lepisosteus_oculatus
ENSXETG00000027218	sub1	100	82.171	ENSLAFG00000032088	-	100	82.171	Loxodonta_africana
ENSXETG00000027218	sub1	100	82.171	ENSLAFG00000011006	-	100	82.171	Loxodonta_africana
ENSXETG00000027218	sub1	100	70.543	ENSMFAG00000045643	-	61	72.093	Macaca_fascicularis
ENSXETG00000027218	sub1	100	79.070	ENSMFAG00000040728	SUB1	100	80.620	Macaca_fascicularis
ENSXETG00000027218	sub1	100	79.070	ENSMMUG00000046181	SUB1	100	80.620	Macaca_mulatta
ENSXETG00000027218	sub1	100	79.070	ENSMNEG00000037046	SUB1	100	80.620	Macaca_nemestrina
ENSXETG00000027218	sub1	100	77.519	ENSMLEG00000030509	-	94	79.070	Mandrillus_leucophaeus
ENSXETG00000027218	sub1	100	67.188	ENSMLEG00000043436	-	90	67.188	Mandrillus_leucophaeus
ENSXETG00000027218	sub1	100	79.070	ENSMLEG00000037017	-	100	80.620	Mandrillus_leucophaeus
ENSXETG00000027218	sub1	100	71.094	ENSMAMG00000018428	sub1b	100	67.188	Mastacembelus_armatus
ENSXETG00000027218	sub1	100	72.656	ENSMZEG00005021252	sub1b	100	68.750	Maylandia_zebra
ENSXETG00000027218	sub1	100	84.375	ENSMGAG00000002906	SUB1	100	84.375	Meleagris_gallopavo
ENSXETG00000027218	sub1	100	47.287	ENSMGAG00000001200	-	95	47.287	Meleagris_gallopavo
ENSXETG00000027218	sub1	100	78.295	ENSMAUG00000020232	Sub1	100	78.295	Mesocricetus_auratus
ENSXETG00000027218	sub1	100	79.070	ENSMICG00000014535	SUB1	100	80.620	Microcebus_murinus
ENSXETG00000027218	sub1	100	77.519	ENSMOCG00000018930	-	100	77.519	Microtus_ochrogaster
ENSXETG00000027218	sub1	100	68.217	ENSMOCG00000016424	-	100	68.217	Microtus_ochrogaster
ENSXETG00000027218	sub1	100	74.468	ENSMODG00000020410	SUB1	100	74.468	Monodelphis_domestica
ENSXETG00000027218	sub1	100	72.656	ENSMALG00000007163	sub1b	81	68.750	Monopterus_albus
ENSXETG00000027218	sub1	100	78.295	MGP_CAROLIEiJ_G0019676	Sub1	100	78.295	Mus_caroli
ENSXETG00000027218	sub1	100	78.295	ENSMUSG00000022205	Sub1	100	78.295	Mus_musculus
ENSXETG00000027218	sub1	100	79.070	MGP_PahariEiJ_G0016056	Sub1	100	79.070	Mus_pahari
ENSXETG00000027218	sub1	100	78.295	MGP_SPRETEiJ_G0020573	Sub1	100	78.295	Mus_spretus
ENSXETG00000027218	sub1	100	78.295	ENSMPUG00000018418	-	100	79.845	Mustela_putorius_furo
ENSXETG00000027218	sub1	100	79.070	ENSMPUG00000015185	-	100	80.620	Mustela_putorius_furo
ENSXETG00000027218	sub1	100	75.194	ENSMLUG00000009236	-	95	75.194	Myotis_lucifugus
ENSXETG00000027218	sub1	100	79.070	ENSMLUG00000013685	-	95	80.620	Myotis_lucifugus
ENSXETG00000027218	sub1	100	75.781	ENSNGAG00000010782	-	84	75.781	Nannospalax_galili
ENSXETG00000027218	sub1	100	71.094	ENSNGAG00000017212	-	100	71.094	Nannospalax_galili
ENSXETG00000027218	sub1	100	78.295	ENSNGAG00000014072	-	100	78.295	Nannospalax_galili
ENSXETG00000027218	sub1	81	71.154	ENSNBRG00000008451	sub1b	85	71.154	Neolamprologus_brichardi
ENSXETG00000027218	sub1	100	76.562	ENSNLEG00000035968	-	100	76.562	Nomascus_leucogenys
ENSXETG00000027218	sub1	100	78.295	ENSNLEG00000036068	SUB1	100	79.845	Nomascus_leucogenys
ENSXETG00000027218	sub1	100	79.070	ENSNLEG00000018383	-	95	80.620	Nomascus_leucogenys
ENSXETG00000027218	sub1	100	82.031	ENSMEUG00000007770	SUB1	100	82.031	Notamacropus_eugenii
ENSXETG00000027218	sub1	100	77.519	ENSOPRG00000012887	SUB1	100	79.070	Ochotona_princeps
ENSXETG00000027218	sub1	100	75.194	ENSODEG00000014558	-	84	75.194	Octodon_degus
ENSXETG00000027218	sub1	85	73.636	ENSODEG00000015114	-	98	76.613	Octodon_degus
ENSXETG00000027218	sub1	100	79.070	ENSODEG00000001937	-	100	80.620	Octodon_degus
ENSXETG00000027218	sub1	100	84.375	ENSOANG00000002328	SUB1	95	84.375	Ornithorhynchus_anatinus
ENSXETG00000027218	sub1	100	77.519	ENSOCUG00000006262	SUB1	60	79.070	Oryctolagus_cuniculus
ENSXETG00000027218	sub1	98	77.778	ENSOGAG00000000337	-	100	79.365	Otolemur_garnettii
ENSXETG00000027218	sub1	100	79.070	ENSOGAG00000009012	-	100	80.620	Otolemur_garnettii
ENSXETG00000027218	sub1	100	79.070	ENSOARG00000012154	SUB1	100	80.620	Ovis_aries
ENSXETG00000027218	sub1	100	79.070	ENSPPAG00000011212	SUB1	100	80.620	Pan_paniscus
ENSXETG00000027218	sub1	100	79.070	ENSPPRG00000008557	SUB1	100	80.620	Panthera_pardus
ENSXETG00000027218	sub1	100	79.070	ENSPTIG00000009466	SUB1	100	80.620	Panthera_tigris_altaica
ENSXETG00000027218	sub1	100	73.643	ENSPTRG00000041644	-	100	75.969	Pan_troglodytes
ENSXETG00000027218	sub1	100	79.070	ENSPTRG00000048895	SUB1	100	80.620	Pan_troglodytes
ENSXETG00000027218	sub1	100	78.295	ENSPANG00000000672	-	91	78.295	Papio_anubis
ENSXETG00000027218	sub1	100	79.070	ENSPANG00000000339	-	97	80.620	Papio_anubis
ENSXETG00000027218	sub1	100	66.406	ENSPANG00000033272	-	90	66.406	Papio_anubis
ENSXETG00000027218	sub1	100	75.969	ENSPANG00000035601	-	100	75.969	Papio_anubis
ENSXETG00000027218	sub1	100	79.070	ENSPANG00000002644	-	95	80.620	Papio_anubis
ENSXETG00000027218	sub1	100	73.438	ENSPKIG00000016923	sub1b	100	69.531	Paramormyrops_kingsleyae
ENSXETG00000027218	sub1	100	82.812	ENSPSIG00000005731	SUB1	95	82.812	Pelodiscus_sinensis
ENSXETG00000027218	sub1	100	82.031	ENSPCIG00000020907	-	100	82.031	Phascolarctos_cinereus
ENSXETG00000027218	sub1	100	74.219	ENSPCIG00000020827	-	100	74.219	Phascolarctos_cinereus
ENSXETG00000027218	sub1	100	79.070	ENSPPYG00000015379	SUB1	100	80.620	Pongo_abelii
ENSXETG00000027218	sub1	100	75.969	ENSPPYG00000018347	-	100	78.295	Pongo_abelii
ENSXETG00000027218	sub1	100	79.070	ENSPCOG00000014391	SUB1	100	80.620	Propithecus_coquereli
ENSXETG00000027218	sub1	100	79.845	ENSPVAG00000004785	SUB1	100	81.395	Pteropus_vampyrus
ENSXETG00000027218	sub1	100	72.656	ENSPNYG00000010975	sub1b	100	68.750	Pundamilia_nyererei
ENSXETG00000027218	sub1	99	74.016	ENSPNAG00000005998	sub1b	99	70.079	Pygocentrus_nattereri
ENSXETG00000027218	sub1	100	66.667	ENSPNAG00000008693	sub1a	100	67.442	Pygocentrus_nattereri
ENSXETG00000027218	sub1	100	79.070	ENSRNOG00000050563	Sub1	100	79.070	Rattus_norvegicus
ENSXETG00000027218	sub1	100	74.419	ENSRBIG00000031233	SUB1	100	75.969	Rhinopithecus_bieti
ENSXETG00000027218	sub1	100	73.438	ENSRROG00000042718	-	90	73.438	Rhinopithecus_roxellana
ENSXETG00000027218	sub1	100	79.070	ENSRROG00000040438	SUB1	100	80.620	Rhinopithecus_roxellana
ENSXETG00000027218	sub1	100	79.070	ENSSBOG00000026994	SUB1	100	80.620	Saimiri_boliviensis_boliviensis
ENSXETG00000027218	sub1	100	82.031	ENSSHAG00000014986	SUB1	100	82.031	Sarcophilus_harrisii
ENSXETG00000027218	sub1	100	72.093	ENSSFOG00015018386	sub1b	100	73.643	Scleropages_formosus
ENSXETG00000027218	sub1	100	70.312	ENSSFOG00015017283	sub1b	100	67.188	Scleropages_formosus
ENSXETG00000027218	sub1	100	71.875	ENSSMAG00000000313	sub1b	100	67.969	Scophthalmus_maximus
ENSXETG00000027218	sub1	100	71.875	ENSSDUG00000013854	sub1b	76	67.969	Seriola_dumerili
ENSXETG00000027218	sub1	100	71.875	ENSSLDG00000000852	sub1b	100	67.969	Seriola_lalandi_dorsalis
ENSXETG00000027218	sub1	100	82.812	ENSSPUG00000016817	SUB1	100	82.812	Sphenodon_punctatus
ENSXETG00000027218	sub1	100	71.875	ENSSPAG00000019363	sub1b	100	67.969	Stegastes_partitus
ENSXETG00000027218	sub1	100	79.070	ENSSSCG00000032650	-	100	80.620	Sus_scrofa
ENSXETG00000027218	sub1	100	79.070	ENSSSCG00000040294	-	87	80.620	Sus_scrofa
ENSXETG00000027218	sub1	100	82.812	ENSTGUG00000001918	SUB1	100	82.812	Taeniopygia_guttata
ENSXETG00000027218	sub1	100	67.188	ENSTRUG00000024420	sub1b	100	68.750	Takifugu_rubripes
ENSXETG00000027218	sub1	100	69.531	ENSTNIG00000002700	sub1b	100	68.750	Tetraodon_nigroviridis
ENSXETG00000027218	sub1	99	73.438	ENSTBEG00000015821	-	100	75.000	Tupaia_belangeri
ENSXETG00000027218	sub1	100	73.643	ENSTBEG00000012861	-	100	75.194	Tupaia_belangeri
ENSXETG00000027218	sub1	100	73.643	ENSTBEG00000001790	-	100	75.194	Tupaia_belangeri
ENSXETG00000027218	sub1	100	78.295	ENSTBEG00000004053	-	100	79.845	Tupaia_belangeri
ENSXETG00000027218	sub1	100	73.643	ENSTBEG00000011247	-	99	75.194	Tupaia_belangeri
ENSXETG00000027218	sub1	100	77.519	ENSTBEG00000006504	-	100	79.070	Tupaia_belangeri
ENSXETG00000027218	sub1	81	76.190	ENSTTRG00000017324	SUB1	100	78.095	Tursiops_truncatus
ENSXETG00000027218	sub1	100	79.070	ENSUAMG00000000182	SUB1	100	80.620	Ursus_americanus
ENSXETG00000027218	sub1	100	79.070	ENSUMAG00000013792	SUB1	100	80.620	Ursus_maritimus
ENSXETG00000027218	sub1	100	73.438	ENSVPAG00000011012	SUB1	100	73.438	Vicugna_pacos
ENSXETG00000027218	sub1	89	72.174	ENSVVUG00000025193	-	95	73.913	Vulpes_vulpes
ENSXETG00000027218	sub1	100	79.070	ENSVVUG00000022166	-	100	80.620	Vulpes_vulpes