EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Orthologs

Description

Ensembl ID: ENSXETG00000027254 (Gene tree)
Gene ID: -
Gene Symbol: mrpl53
Alias: -
Full Name: Xenopus tropicalis mitochondrial ribosomal protein L53 (mrpl53)%2C mRNA.
Gene Type: protein_coding
Species: Xenopus_tropicalis
Status: putative
Strand: Plus strand
Length: 5768 bases
Position: chrGL172861.1:1277543-1283310
Accession: NM_001005117
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSXETP00000056959	MRP_L53	PF10780.9	1.3e-18	1	1
ENSXETP00000060023	MRP_L53	PF10780.9	2.9e-18	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSXETT00000056959	-	1077	-	ENSXETP00000056959	108 (aa)	-	Q6DEP0
ENSXETT00000063436	-	430	-	ENSXETP00000060023	120 (aa)	-	F7EJA4

Gene Model

Click here to download ENSXETG00000027254's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSXETG00000027254's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSXETG00000027254	mrpl53	100	54.630	ENSAPOG00000018686	mrpl53	100	54.630	Acanthochromis_polyacanthus
ENSXETG00000027254	mrpl53	100	51.852	ENSACIG00000015651	mrpl53	100	51.852	Amphilophus_citrinellus
ENSXETG00000027254	mrpl53	100	53.704	ENSAOCG00000015743	mrpl53	100	53.704	Amphiprion_ocellaris
ENSXETG00000027254	mrpl53	100	53.704	ENSAPEG00000011361	mrpl53	100	53.704	Amphiprion_percula
ENSXETG00000027254	mrpl53	100	50.000	ENSATEG00000013631	mrpl53	100	50.000	Anabas_testudineus
ENSXETG00000027254	mrpl53	100	51.852	ENSACLG00000015516	mrpl53	100	51.852	Astatotilapia_calliptera
ENSXETG00000027254	mrpl53	98	50.943	ENSAMXG00000036162	mrpl53	99	50.943	Astyanax_mexicanus
ENSXETG00000027254	mrpl53	98	54.717	ENSCPBG00000007276	-	96	54.717	Chrysemys_picta_bellii
ENSXETG00000027254	mrpl53	100	51.852	ENSCSEG00000017619	mrpl53	92	51.852	Cynoglossus_semilaevis
ENSXETG00000027254	mrpl53	100	52.778	ENSCVAG00000002869	mrpl53	100	52.778	Cyprinodon_variegatus
ENSXETG00000027254	mrpl53	100	51.852	ENSDARG00000008920	mrpl53	100	51.852	Danio_rerio
ENSXETG00000027254	mrpl53	81	34.146	ENSEBUG00000009798	mrpl53	88	34.146	Eptatretus_burgeri
ENSXETG00000027254	mrpl53	99	52.336	ENSELUG00000003794	mrpl53	99	52.336	Esox_lucius
ENSXETG00000027254	mrpl53	93	54.000	ENSFALG00000008629	-	92	54.000	Ficedula_albicollis
ENSXETG00000027254	mrpl53	100	52.778	ENSFHEG00000012925	mrpl53	100	52.778	Fundulus_heteroclitus
ENSXETG00000027254	mrpl53	95	50.485	ENSGMOG00000003046	mrpl53	97	50.485	Gadus_morhua
ENSXETG00000027254	mrpl53	93	55.000	ENSGALG00000037867	MRPL53	93	55.000	Gallus_gallus
ENSXETG00000027254	mrpl53	100	50.926	ENSGAFG00000010591	mrpl53	100	50.926	Gambusia_affinis
ENSXETG00000027254	mrpl53	100	51.852	ENSGACG00000003453	mrpl53	100	51.852	Gasterosteus_aculeatus
ENSXETG00000027254	mrpl53	98	52.830	ENSGAGG00000013774	-	96	52.830	Gopherus_agassizii
ENSXETG00000027254	mrpl53	100	51.852	ENSHBUG00000002532	mrpl53	100	51.852	Haplochromis_burtoni
ENSXETG00000027254	mrpl53	99	54.206	ENSHCOG00000019265	mrpl53	100	54.206	Hippocampus_comes
ENSXETG00000027254	mrpl53	100	51.852	ENSIPUG00000001363	MRPL53	100	51.852	Ictalurus_punctatus
ENSXETG00000027254	mrpl53	100	51.852	ENSKMAG00000007151	mrpl53	73	51.852	Kryptolebias_marmoratus
ENSXETG00000027254	mrpl53	100	48.148	ENSLBEG00000018225	mrpl53	100	48.148	Labrus_bergylta
ENSXETG00000027254	mrpl53	93	58.000	ENSLACG00000008769	mrpl53	92	58.000	Latimeria_chalumnae
ENSXETG00000027254	mrpl53	92	56.566	ENSLOCG00000002871	mrpl53	92	56.566	Lepisosteus_oculatus
ENSXETG00000027254	mrpl53	99	52.336	ENSMAMG00000013973	mrpl53	100	52.336	Mastacembelus_armatus
ENSXETG00000027254	mrpl53	100	51.852	ENSMZEG00005028437	mrpl53	100	51.852	Maylandia_zebra
ENSXETG00000027254	mrpl53	100	51.852	ENSMZEG00005003657	mrpl53	100	51.852	Maylandia_zebra
ENSXETG00000027254	mrpl53	100	50.459	ENSMMOG00000018994	mrpl53	100	50.459	Mola_mola
ENSXETG00000027254	mrpl53	100	42.478	ENSMALG00000005152	mrpl53	100	42.478	Monopterus_albus
ENSXETG00000027254	mrpl53	100	51.852	ENSNBRG00000013184	mrpl53	100	51.852	Neolamprologus_brichardi
ENSXETG00000027254	mrpl53	95	52.427	ENSONIG00000002633	mrpl53	97	52.427	Oreochromis_niloticus
ENSXETG00000027254	mrpl53	100	51.852	ENSORLG00000028306	mrpl53	100	51.852	Oryzias_latipes
ENSXETG00000027254	mrpl53	100	51.852	ENSORLG00020006678	mrpl53	100	51.852	Oryzias_latipes_hni
ENSXETG00000027254	mrpl53	100	51.852	ENSORLG00015014629	mrpl53	100	51.852	Oryzias_latipes_hsok
ENSXETG00000027254	mrpl53	100	50.926	ENSOMEG00000012839	mrpl53	100	50.926	Oryzias_melastigma
ENSXETG00000027254	mrpl53	91	54.082	ENSPKIG00000006982	mrpl53	92	54.082	Paramormyrops_kingsleyae
ENSXETG00000027254	mrpl53	78	50.000	ENSPSIG00000013947	-	87	50.000	Pelodiscus_sinensis
ENSXETG00000027254	mrpl53	100	50.926	ENSPMGG00000022855	mrpl53	100	50.926	Periophthalmus_magnuspinnatus
ENSXETG00000027254	mrpl53	95	53.398	ENSPLAG00000006658	mrpl53	99	53.398	Poecilia_latipinna
ENSXETG00000027254	mrpl53	95	52.427	ENSPMEG00000016912	mrpl53	99	52.427	Poecilia_mexicana
ENSXETG00000027254	mrpl53	95	52.427	ENSPMEG00000002671	mrpl53	99	52.427	Poecilia_mexicana
ENSXETG00000027254	mrpl53	95	52.427	ENSPREG00000008114	mrpl53	99	52.427	Poecilia_reticulata
ENSXETG00000027254	mrpl53	100	51.852	ENSPNYG00000011866	mrpl53	100	51.852	Pundamilia_nyererei
ENSXETG00000027254	mrpl53	98	50.943	ENSPNAG00000010462	mrpl53	99	50.943	Pygocentrus_nattereri
ENSXETG00000027254	mrpl53	97	51.429	ENSSFOG00015004568	mrpl53	99	51.429	Scleropages_formosus
ENSXETG00000027254	mrpl53	100	50.000	ENSSMAG00000007790	mrpl53	100	50.000	Scophthalmus_maximus
ENSXETG00000027254	mrpl53	100	54.630	ENSSDUG00000011350	mrpl53	100	54.630	Seriola_dumerili
ENSXETG00000027254	mrpl53	100	55.556	ENSSLDG00000013473	mrpl53	100	55.556	Seriola_lalandi_dorsalis
ENSXETG00000027254	mrpl53	93	53.000	ENSSPUG00000009029	-	88	53.000	Sphenodon_punctatus
ENSXETG00000027254	mrpl53	100	50.926	ENSSPAG00000019879	mrpl53	92	50.926	Stegastes_partitus
ENSXETG00000027254	mrpl53	93	54.000	ENSTGUG00000011655	-	90	54.000	Taeniopygia_guttata
ENSXETG00000027254	mrpl53	93	54.000	ENSTGUG00000013874	-	90	54.000	Taeniopygia_guttata
ENSXETG00000027254	mrpl53	92	51.515	ENSTRUG00000014652	mrpl53	98	50.962	Takifugu_rubripes
ENSXETG00000027254	mrpl53	100	50.926	ENSXCOG00000020063	mrpl53	100	50.926	Xiphophorus_couchianus
ENSXETG00000027254	mrpl53	100	51.852	ENSXMAG00000024348	mrpl53	100	51.852	Xiphophorus_maculatus