EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Orthologs

Description

Ensembl ID: ENSXETG00000027266 (Gene tree)
Gene ID: -
Gene Symbol: snrpb
Alias: -
Full Name: Xenopus tropicalis small nuclear ribonucleoprotein polypeptides B and B1 (snrpb)%2C mRNA.
Gene Type: protein_coding
Species: Xenopus_tropicalis
Status: putative
Strand: Minus strand
Length: 5597 bases
Position: chrGL172791.1:580368-585964
Accession: NM_001001198
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSXETP00000057611	LSM	PF01423.22	5.6e-20	1	1
ENSXETP00000056980	LSM	PF01423.22	7.5e-20	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSXETT00000057611	-	1754	-	ENSXETP00000057611	237 (aa)	-	Q6NX14
ENSXETT00000056980	-	923	-	ENSXETP00000056980	281 (aa)	-	F6TU57

Gene Model

Click here to download ENSXETG00000027266's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSXETG00000027266's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSXETG00000027266	snrpb	93	95.475	ENSG00000125835	SNRPB	92	95.475	Homo_sapiens
ENSXETG00000027266	snrpb	76	92.818	ENSAPOG00000019606	snrpb	51	98.000	Acanthochromis_polyacanthus
ENSXETG00000027266	snrpb	93	95.455	ENSAMEG00000011353	SNRPB	91	95.455	Ailuropoda_melanoleuca
ENSXETG00000027266	snrpb	74	92.571	ENSACIG00000014480	snrpb	64	97.917	Amphilophus_citrinellus
ENSXETG00000027266	snrpb	76	92.818	ENSAOCG00000006876	snrpb	63	98.000	Amphiprion_ocellaris
ENSXETG00000027266	snrpb	76	92.818	ENSAPEG00000021585	snrpb	64	98.000	Amphiprion_percula
ENSXETG00000027266	snrpb	76	92.265	ENSATEG00000009836	snrpb	63	98.000	Anabas_testudineus
ENSXETG00000027266	snrpb	90	96.244	ENSACAG00000002053	SNRPB	92	96.244	Anolis_carolinensis
ENSXETG00000027266	snrpb	93	95.475	ENSANAG00000024443	-	92	95.475	Aotus_nancymaae
ENSXETG00000027266	snrpb	91	88.837	ENSANAG00000036271	-	76	88.889	Aotus_nancymaae
ENSXETG00000027266	snrpb	76	92.818	ENSACLG00000014707	snrpb	63	98.000	Astatotilapia_calliptera
ENSXETG00000027266	snrpb	63	97.333	ENSAMXG00000029434	snrpb	63	97.333	Astyanax_mexicanus
ENSXETG00000027266	snrpb	92	84.163	ENSBTAG00000001038	SNRPB	96	95.023	Bos_taurus
ENSXETG00000027266	snrpb	90	87.850	ENSCJAG00000023097	-	79	88.360	Callithrix_jacchus
ENSXETG00000027266	snrpb	72	95.294	ENSCJAG00000020971	-	82	95.767	Callithrix_jacchus
ENSXETG00000027266	snrpb	79	84.211	ENSCAFG00000031109	-	79	81.053	Canis_familiaris
ENSXETG00000027266	snrpb	72	95.294	ENSCAFG00000006693	-	82	95.767	Canis_familiaris
ENSXETG00000027266	snrpb	93	95.475	ENSCAFG00020016981	-	92	95.475	Canis_lupus_dingo
ENSXETG00000027266	snrpb	72	95.294	ENSCHIG00000025449	-	96	95.023	Capra_hircus
ENSXETG00000027266	snrpb	72	95.294	ENSTSYG00000014498	-	82	95.767	Carlito_syrichta
ENSXETG00000027266	snrpb	95	73.333	ENSTSYG00000032303	-	55	78.378	Carlito_syrichta
ENSXETG00000027266	snrpb	93	95.455	ENSCAPG00000012669	SNRPB	91	95.455	Cavia_aperea
ENSXETG00000027266	snrpb	72	95.294	ENSCPOG00000039408	SNRPB	82	95.767	Cavia_porcellus
ENSXETG00000027266	snrpb	93	95.475	ENSCCAG00000026002	SNRPB	92	95.475	Cebus_capucinus
ENSXETG00000027266	snrpb	54	85.039	ENSCCAG00000035140	-	89	86.275	Cebus_capucinus
ENSXETG00000027266	snrpb	72	95.294	ENSCATG00000030230	SNRPB	82	95.767	Cercocebus_atys
ENSXETG00000027266	snrpb	67	95.767	ENSCLAG00000012442	SNRPB	80	95.767	Chinchilla_lanigera
ENSXETG00000027266	snrpb	72	95.294	ENSCSAG00000010840	SNRPB	82	95.767	Chlorocebus_sabaeus
ENSXETG00000027266	snrpb	100	95.833	ENSCPBG00000026801	SNRPB	100	95.833	Chrysemys_picta_bellii
ENSXETG00000027266	snrpb	93	95.475	ENSCANG00000019461	SNRPB	92	95.475	Colobus_angolensis_palliatus
ENSXETG00000027266	snrpb	74	95.429	ENSCGRG00001023046	Snrpb	82	95.767	Cricetulus_griseus_chok1gshd
ENSXETG00000027266	snrpb	74	95.429	ENSCGRG00000010423	Snrpb	95	95.305	Cricetulus_griseus_crigri
ENSXETG00000027266	snrpb	77	92.350	ENSCSEG00000020328	snrpb	63	98.000	Cynoglossus_semilaevis
ENSXETG00000027266	snrpb	63	98.000	ENSDARG00000011125	snrpb	63	98.000	Danio_rerio
ENSXETG00000027266	snrpb	93	90.950	ENSDNOG00000007896	-	91	90.950	Dasypus_novemcinctus
ENSXETG00000027266	snrpb	93	95.475	ENSDNOG00000015545	-	92	95.475	Dasypus_novemcinctus
ENSXETG00000027266	snrpb	69	95.122	ENSDORG00000029558	Snrpb	93	94.884	Dipodomys_ordii
ENSXETG00000027266	snrpb	62	70.946	FBgn0262601	SmB	73	70.946	Drosophila_melanogaster
ENSXETG00000027266	snrpb	78	77.957	ENSEBUG00000007467	SNRPB	62	89.865	Eptatretus_burgeri
ENSXETG00000027266	snrpb	72	94.706	ENSEASG00005012991	SNRPB	82	95.238	Equus_asinus_asinus
ENSXETG00000027266	snrpb	72	95.294	ENSECAG00000011944	SNRPB	82	95.767	Equus_caballus
ENSXETG00000027266	snrpb	72	95.294	ENSEEUG00000015568	SNRPB	78	95.475	Erinaceus_europaeus
ENSXETG00000027266	snrpb	61	98.621	ENSELUG00000014564	snrpb	64	97.917	Esox_lucius
ENSXETG00000027266	snrpb	72	95.294	ENSFCAG00000034090	-	82	95.767	Felis_catus
ENSXETG00000027266	snrpb	97	95.259	ENSFALG00000004866	SNRPB	100	95.259	Ficedula_albicollis
ENSXETG00000027266	snrpb	93	95.455	ENSFDAG00000009937	SNRPB	91	95.455	Fukomys_damarensis
ENSXETG00000027266	snrpb	100	95.417	ENSGALG00000035421	SNRPN	100	95.417	Gallus_gallus
ENSXETG00000027266	snrpb	73	93.023	ENSGAFG00000019558	snrpb	65	97.315	Gambusia_affinis
ENSXETG00000027266	snrpb	77	91.803	ENSGACG00000003262	snrpb	63	98.000	Gasterosteus_aculeatus
ENSXETG00000027266	snrpb	100	95.833	ENSGAGG00000001308	SNRPB	100	95.833	Gopherus_agassizii
ENSXETG00000027266	snrpb	72	95.294	ENSGGOG00000016138	SNRPB	82	95.767	Gorilla_gorilla
ENSXETG00000027266	snrpb	76	92.818	ENSHBUG00000008369	snrpb	63	98.000	Haplochromis_burtoni
ENSXETG00000027266	snrpb	63	86.667	ENSHGLG00000016505	-	72	86.667	Heterocephalus_glaber_female
ENSXETG00000027266	snrpb	72	95.294	ENSHGLG00000016241	-	82	95.767	Heterocephalus_glaber_female
ENSXETG00000027266	snrpb	63	86.667	ENSHGLG00100004178	-	72	86.667	Heterocephalus_glaber_male
ENSXETG00000027266	snrpb	93	95.475	ENSHGLG00100012877	-	92	95.475	Heterocephalus_glaber_male
ENSXETG00000027266	snrpb	77	92.896	ENSHCOG00000014888	snrpb	63	98.000	Hippocampus_comes
ENSXETG00000027266	snrpb	63	98.000	ENSIPUG00000024569	SNRPB	63	98.000	Ictalurus_punctatus
ENSXETG00000027266	snrpb	91	78.241	ENSSTOG00000027821	-	62	96.324	Ictidomys_tridecemlineatus
ENSXETG00000027266	snrpb	93	93.665	ENSSTOG00000033664	-	92	93.665	Ictidomys_tridecemlineatus
ENSXETG00000027266	snrpb	72	95.294	ENSJJAG00000024170	Snrpb	82	95.767	Jaculus_jaculus
ENSXETG00000027266	snrpb	73	94.220	ENSKMAG00000014494	snrpb	61	98.667	Kryptolebias_marmoratus
ENSXETG00000027266	snrpb	77	92.896	ENSLBEG00000005678	snrpb	63	98.000	Labrus_bergylta
ENSXETG00000027266	snrpb	93	94.570	ENSLACG00000011459	SNRPB	92	94.570	Latimeria_chalumnae
ENSXETG00000027266	snrpb	63	98.667	ENSLOCG00000002687	snrpb	63	98.667	Lepisosteus_oculatus
ENSXETG00000027266	snrpb	71	90.533	ENSLAFG00000017588	SNRPB	95	91.364	Loxodonta_africana
ENSXETG00000027266	snrpb	72	95.294	ENSMFAG00000038756	SNRPB	82	95.767	Macaca_fascicularis
ENSXETG00000027266	snrpb	79	88.298	ENSMMUG00000010050	SNRPB	82	95.767	Macaca_mulatta
ENSXETG00000027266	snrpb	72	95.294	ENSMNEG00000027954	SNRPB	82	95.767	Macaca_nemestrina
ENSXETG00000027266	snrpb	93	95.475	ENSMLEG00000022346	SNRPB	92	95.475	Mandrillus_leucophaeus
ENSXETG00000027266	snrpb	76	92.778	ENSMAMG00000009294	snrpb	61	97.987	Mastacembelus_armatus
ENSXETG00000027266	snrpb	76	92.818	ENSMZEG00005011856	snrpb	63	98.000	Maylandia_zebra
ENSXETG00000027266	snrpb	97	80.435	ENSMICG00000015983	-	87	85.714	Microcebus_murinus
ENSXETG00000027266	snrpb	72	95.294	ENSMICG00000016519	SNRPB	96	95.023	Microcebus_murinus
ENSXETG00000027266	snrpb	83	78.571	ENSMOCG00000021362	-	83	73.469	Microtus_ochrogaster
ENSXETG00000027266	snrpb	72	94.706	ENSMOCG00000002892	-	82	95.238	Microtus_ochrogaster
ENSXETG00000027266	snrpb	77	92.308	ENSMMOG00000013226	snrpb	64	97.987	Mola_mola
ENSXETG00000027266	snrpb	76	92.265	ENSMALG00000020839	snrpb	51	97.333	Monopterus_albus
ENSXETG00000027266	snrpb	72	95.294	MGP_CAROLIEiJ_G0024293	Snrpb	82	95.767	Mus_caroli
ENSXETG00000027266	snrpb	72	95.294	ENSMUSG00000027404	Snrpb	82	95.767	Mus_musculus
ENSXETG00000027266	snrpb	72	95.294	MGP_PahariEiJ_G0025738	Snrpb	82	95.767	Mus_pahari
ENSXETG00000027266	snrpb	72	95.294	MGP_SPRETEiJ_G0025213	Snrpb	82	95.767	Mus_spretus
ENSXETG00000027266	snrpb	72	95.294	ENSMPUG00000009283	SNRPB	82	95.767	Mustela_putorius_furo
ENSXETG00000027266	snrpb	93	92.308	ENSMLUG00000016951	SNRPB	92	92.308	Myotis_lucifugus
ENSXETG00000027266	snrpb	72	95.294	ENSNGAG00000012051	Snrpb	82	95.767	Nannospalax_galili
ENSXETG00000027266	snrpb	76	90.055	ENSNBRG00000006353	snrpb	56	96.575	Neolamprologus_brichardi
ENSXETG00000027266	snrpb	93	95.475	ENSNLEG00000029067	SNRPB	92	95.475	Nomascus_leucogenys
ENSXETG00000027266	snrpb	71	95.266	ENSMEUG00000015625	SNRPB	98	95.000	Notamacropus_eugenii
ENSXETG00000027266	snrpb	93	91.818	ENSODEG00000004305	-	92	91.818	Octodon_degus
ENSXETG00000027266	snrpb	96	91.189	ENSODEG00000016060	-	79	92.063	Octodon_degus
ENSXETG00000027266	snrpb	76	92.818	ENSONIG00000000248	snrpb	63	98.000	Oreochromis_niloticus
ENSXETG00000027266	snrpb	91	90.233	ENSOCUG00000021456	-	78	91.534	Oryctolagus_cuniculus
ENSXETG00000027266	snrpb	76	88.827	ENSOCUG00000022423	-	86	92.857	Oryctolagus_cuniculus
ENSXETG00000027266	snrpb	90	92.488	ENSOCUG00000028215	-	79	93.122	Oryctolagus_cuniculus
ENSXETG00000027266	snrpb	93	95.023	ENSOCUG00000014042	-	92	95.023	Oryctolagus_cuniculus
ENSXETG00000027266	snrpb	90	69.014	ENSOCUG00000026813	-	71	69.697	Oryctolagus_cuniculus
ENSXETG00000027266	snrpb	76	92.265	ENSORLG00000021862	snrpb	63	98.000	Oryzias_latipes
ENSXETG00000027266	snrpb	93	95.475	ENSOGAG00000016149	SNRPB	92	95.475	Otolemur_garnettii
ENSXETG00000027266	snrpb	72	95.294	ENSOARG00000006740	SNRPB	96	95.023	Ovis_aries
ENSXETG00000027266	snrpb	72	95.294	ENSPPAG00000036314	SNRPB	82	95.767	Pan_paniscus
ENSXETG00000027266	snrpb	93	95.475	ENSPPRG00000003233	-	92	95.475	Panthera_pardus
ENSXETG00000027266	snrpb	93	95.455	ENSPTIG00000007468	SNRPB	92	95.455	Panthera_tigris_altaica
ENSXETG00000027266	snrpb	72	95.294	ENSPTRG00000013176	SNRPB	82	95.767	Pan_troglodytes
ENSXETG00000027266	snrpb	93	95.475	ENSPANG00000020362	SNRPB	92	95.475	Papio_anubis
ENSXETG00000027266	snrpb	63	98.000	ENSPKIG00000002865	snrpb	63	98.000	Paramormyrops_kingsleyae
ENSXETG00000027266	snrpb	99	95.816	ENSPSIG00000014125	SNRPB	98	95.816	Pelodiscus_sinensis
ENSXETG00000027266	snrpb	75	90.449	ENSPMGG00000016349	snrpb	62	95.862	Periophthalmus_magnuspinnatus
ENSXETG00000027266	snrpb	72	95.294	ENSPEMG00000007948	Snrpb	82	95.767	Peromyscus_maniculatus_bairdii
ENSXETG00000027266	snrpb	93	95.000	ENSPCIG00000004694	SNRPB	91	95.000	Phascolarctos_cinereus
ENSXETG00000027266	snrpb	63	97.987	ENSPFOG00000011802	snrpb	63	97.987	Poecilia_formosa
ENSXETG00000027266	snrpb	91	73.023	ENSPLAG00000014130	snrpb	59	98.519	Poecilia_latipinna
ENSXETG00000027266	snrpb	57	98.519	ENSPREG00000015515	snrpb	62	98.519	Poecilia_reticulata
ENSXETG00000027266	snrpb	72	95.294	ENSPPYG00000010841	SNRPB	82	95.767	Pongo_abelii
ENSXETG00000027266	snrpb	72	95.294	ENSPCOG00000013686	SNRPB	82	95.767	Propithecus_coquereli
ENSXETG00000027266	snrpb	72	94.118	ENSPVAG00000017013	SNRPB	77	94.570	Pteropus_vampyrus
ENSXETG00000027266	snrpb	76	92.818	ENSPNYG00000014788	snrpb	63	98.000	Pundamilia_nyererei
ENSXETG00000027266	snrpb	63	98.000	ENSPNAG00000016126	snrpb	63	98.000	Pygocentrus_nattereri
ENSXETG00000027266	snrpb	72	95.294	ENSRNOG00000006961	Snrpb	82	95.767	Rattus_norvegicus
ENSXETG00000027266	snrpb	71	96.429	ENSRBIG00000040505	SNRPB	73	96.429	Rhinopithecus_bieti
ENSXETG00000027266	snrpb	93	95.475	ENSRROG00000036094	SNRPB	92	95.475	Rhinopithecus_roxellana
ENSXETG00000027266	snrpb	93	95.475	ENSSBOG00000027310	SNRPB	92	95.475	Saimiri_boliviensis_boliviensis
ENSXETG00000027266	snrpb	93	95.928	ENSSHAG00000010394	SNRPB	92	95.928	Sarcophilus_harrisii
ENSXETG00000027266	snrpb	63	97.333	ENSSFOG00015002870	snrpb	63	97.333	Scleropages_formosus
ENSXETG00000027266	snrpb	77	92.350	ENSSMAG00000006766	snrpb	63	98.000	Scophthalmus_maximus
ENSXETG00000027266	snrpb	76	92.818	ENSSDUG00000018539	snrpb	63	98.000	Seriola_dumerili
ENSXETG00000027266	snrpb	76	92.818	ENSSLDG00000022391	snrpb	63	98.000	Seriola_lalandi_dorsalis
ENSXETG00000027266	snrpb	71	79.882	ENSSARG00000003084	SNRPB	94	83.636	Sorex_araneus
ENSXETG00000027266	snrpb	99	95.816	ENSSPUG00000015659	SNRPB	100	95.816	Sphenodon_punctatus
ENSXETG00000027266	snrpb	76	92.818	ENSSPAG00000021992	snrpb	63	98.000	Stegastes_partitus
ENSXETG00000027266	snrpb	89	75.238	ENSSSCG00000011966	-	77	70.492	Sus_scrofa
ENSXETG00000027266	snrpb	72	95.294	ENSSSCG00000040857	-	96	95.023	Sus_scrofa
ENSXETG00000027266	snrpb	59	98.571	ENSTGUG00000005684	SNRPB	59	98.571	Taeniopygia_guttata
ENSXETG00000027266	snrpb	77	92.350	ENSTRUG00000023094	snrpb	66	98.000	Takifugu_rubripes
ENSXETG00000027266	snrpb	77	92.350	ENSTNIG00000002991	snrpb	63	98.000	Tetraodon_nigroviridis
ENSXETG00000027266	snrpb	72	95.294	ENSUAMG00000005984	-	86	95.556	Ursus_americanus
ENSXETG00000027266	snrpb	58	96.350	ENSUMAG00000002123	-	63	96.350	Ursus_maritimus
ENSXETG00000027266	snrpb	93	95.023	ENSVVUG00000025654	-	92	95.023	Vulpes_vulpes
ENSXETG00000027266	snrpb	100	73.418	ENSVVUG00000010086	-	85	77.551	Vulpes_vulpes
ENSXETG00000027266	snrpb	98	35.484	ENSVVUG00000018297	-	74	35.484	Vulpes_vulpes
ENSXETG00000027266	snrpb	72	81.287	ENSXMAG00000028767	snrpb	58	98.519	Xiphophorus_maculatus