EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSXETG00000027370 (Gene tree)
Gene ID: -
Gene Symbol: riok3
Alias: -
Full Name: Xenopus tropicalis RIO kinase 3 (riok3)%2C mRNA.
Gene Type: protein_coding
Species: Xenopus_tropicalis
Status: putative
Strand: Plus strand
Length: 10858 bases
Position: chrGL172720.1:2685944-2696801
Accession: NM_001004996
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSXETP00000057118	RIO1	PF01163.22	6.2e-74	1	1
ENSXETP00000060637	RIO1	PF01163.22	6.4e-74	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSXETT00000066403	-	2807	-	ENSXETP00000060637	515 (aa)	-	F6SZ49
ENSXETT00000057118	-	2786	-	ENSXETP00000057118	508 (aa)	-	Q6DIF7

Gene Model

Click here to download ENSXETG00000027370's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSXETG00000027370's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSXETG00000027370	riok3	56	45.614	ENSXETG00000020436	riok1	50	45.614

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSXETG00000027370	riok3	100	75.769	ENSG00000101782	RIOK3	100	75.769	Homo_sapiens
ENSXETG00000027370	riok3	99	71.598	ENSAPOG00000020861	riok3	98	71.598	Acanthochromis_polyacanthus
ENSXETG00000027370	riok3	100	75.769	ENSAMEG00000013754	RIOK3	85	75.769	Ailuropoda_melanoleuca
ENSXETG00000027370	riok3	99	72.495	ENSACIG00000019894	riok3	99	72.495	Amphilophus_citrinellus
ENSXETG00000027370	riok3	99	73.767	ENSAOCG00000007172	riok3	98	73.767	Amphiprion_ocellaris
ENSXETG00000027370	riok3	99	73.570	ENSAPEG00000002536	riok3	98	73.570	Amphiprion_percula
ENSXETG00000027370	riok3	99	73.715	ENSATEG00000018303	riok3	99	73.715	Anabas_testudineus
ENSXETG00000027370	riok3	97	79.359	ENSAPLG00000006497	RIOK3	97	79.084	Anas_platyrhynchos
ENSXETG00000027370	riok3	100	77.071	ENSACAG00000000159	RIOK3	100	77.071	Anolis_carolinensis
ENSXETG00000027370	riok3	99	56.430	ENSANAG00000030146	RIOK3	99	56.430	Aotus_nancymaae
ENSXETG00000027370	riok3	95	73.511	ENSACLG00000018966	riok3	99	73.511	Astatotilapia_calliptera
ENSXETG00000027370	riok3	97	72.121	ENSAMXG00000015617	riok3	99	71.176	Astyanax_mexicanus
ENSXETG00000027370	riok3	100	75.385	ENSBTAG00000010042	RIOK3	100	75.385	Bos_taurus
ENSXETG00000027370	riok3	93	36.327	WBGene00014012	riok-3	91	36.831	Caenorhabditis_elegans
ENSXETG00000027370	riok3	100	76.346	ENSCJAG00000020556	RIOK3	100	76.346	Callithrix_jacchus
ENSXETG00000027370	riok3	100	76.154	ENSCAFG00000018201	RIOK3	100	76.154	Canis_familiaris
ENSXETG00000027370	riok3	99	77.228	ENSCAFG00020014801	RIOK3	99	81.068	Canis_lupus_dingo
ENSXETG00000027370	riok3	100	75.385	ENSCHIG00000009312	RIOK3	99	77.154	Capra_hircus
ENSXETG00000027370	riok3	99	75.922	ENSTSYG00000000142	RIOK3	99	77.506	Carlito_syrichta
ENSXETG00000027370	riok3	88	80.396	ENSCAPG00000005756	RIOK3	94	80.044	Cavia_aperea
ENSXETG00000027370	riok3	99	76.596	ENSCPOG00000007991	RIOK3	99	76.596	Cavia_porcellus
ENSXETG00000027370	riok3	100	76.731	ENSCCAG00000028338	RIOK3	97	79.263	Cebus_capucinus
ENSXETG00000027370	riok3	100	75.962	ENSCATG00000040824	RIOK3	98	78.670	Cercocebus_atys
ENSXETG00000027370	riok3	99	76.699	ENSCLAG00000006767	RIOK3	99	76.699	Chinchilla_lanigera
ENSXETG00000027370	riok3	100	75.962	ENSCSAG00000017680	RIOK3	100	75.962	Chlorocebus_sabaeus
ENSXETG00000027370	riok3	88	75.368	ENSCHOG00000008343	RIOK3	87	75.368	Choloepus_hoffmanni
ENSXETG00000027370	riok3	99	77.027	ENSCPBG00000027226	RIOK3	99	77.027	Chrysemys_picta_bellii
ENSXETG00000027370	riok3	97	48.030	ENSCSAVG00000003068	-	100	52.990	Ciona_savignyi
ENSXETG00000027370	riok3	95	64.516	ENSCANG00000035939	RIOK3	95	77.778	Colobus_angolensis_palliatus
ENSXETG00000027370	riok3	99	77.220	ENSCGRG00001013249	Riok3	99	77.220	Cricetulus_griseus_chok1gshd
ENSXETG00000027370	riok3	99	77.027	ENSCGRG00000017636	Riok3	99	77.027	Cricetulus_griseus_crigri
ENSXETG00000027370	riok3	99	70.833	ENSCSEG00000018289	riok3	99	72.000	Cynoglossus_semilaevis
ENSXETG00000027370	riok3	99	70.099	ENSCVAG00000011848	riok3	99	70.099	Cyprinodon_variegatus
ENSXETG00000027370	riok3	97	72.967	ENSDARG00000042751	riok3	97	72.967	Danio_rerio
ENSXETG00000027370	riok3	100	76.731	ENSDNOG00000039433	RIOK3	100	76.731	Dasypus_novemcinctus
ENSXETG00000027370	riok3	99	76.255	ENSDORG00000011663	Riok3	99	76.255	Dipodomys_ordii
ENSXETG00000027370	riok3	95	40.693	FBgn0031643	CG3008	87	41.835	Drosophila_melanogaster
ENSXETG00000027370	riok3	93	76.289	ENSETEG00000003689	RIOK3	100	76.289	Echinops_telfairi
ENSXETG00000027370	riok3	96	52.079	ENSEBUG00000000555	riok3	98	52.079	Eptatretus_burgeri
ENSXETG00000027370	riok3	100	74.951	ENSEASG00005002317	RIOK3	100	74.951	Equus_asinus_asinus
ENSXETG00000027370	riok3	100	74.951	ENSECAG00000009028	RIOK3	100	74.951	Equus_caballus
ENSXETG00000027370	riok3	97	61.924	ENSEEUG00000007005	RIOK3	99	62.048	Erinaceus_europaeus
ENSXETG00000027370	riok3	100	71.012	ENSELUG00000017655	riok3	99	71.260	Esox_lucius
ENSXETG00000027370	riok3	100	75.962	ENSFCAG00000000517	RIOK3	100	75.962	Felis_catus
ENSXETG00000027370	riok3	97	79.032	ENSFALG00000006145	RIOK3	100	77.264	Ficedula_albicollis
ENSXETG00000027370	riok3	99	75.629	ENSFDAG00000001548	RIOK3	99	75.629	Fukomys_damarensis
ENSXETG00000027370	riok3	99	71.485	ENSFHEG00000011350	riok3	99	71.485	Fundulus_heteroclitus
ENSXETG00000027370	riok3	87	71.525	ENSGMOG00000005157	riok3	97	71.525	Gadus_morhua
ENSXETG00000027370	riok3	97	79.435	ENSGALG00000015004	RIOK3	100	77.649	Gallus_gallus
ENSXETG00000027370	riok3	91	62.121	ENSGAFG00000002403	riok3	88	62.256	Gambusia_affinis
ENSXETG00000027370	riok3	99	69.291	ENSGACG00000000880	riok3	99	69.291	Gasterosteus_aculeatus
ENSXETG00000027370	riok3	100	76.015	ENSGAGG00000024785	RIOK3	100	76.015	Gopherus_agassizii
ENSXETG00000027370	riok3	56	76.976	ENSGGOG00000036734	-	94	76.976	Gorilla_gorilla
ENSXETG00000027370	riok3	99	72.727	ENSHBUG00000003233	riok3	99	72.727	Haplochromis_burtoni
ENSXETG00000027370	riok3	99	76.402	ENSHGLG00000003885	RIOK3	99	76.402	Heterocephalus_glaber_female
ENSXETG00000027370	riok3	99	76.402	ENSHGLG00100002077	RIOK3	99	76.402	Heterocephalus_glaber_male
ENSXETG00000027370	riok3	99	70.414	ENSHCOG00000006794	riok3	97	70.414	Hippocampus_comes
ENSXETG00000027370	riok3	99	70.414	ENSIPUG00000001406	Riok3	99	70.414	Ictalurus_punctatus
ENSXETG00000027370	riok3	100	75.577	ENSSTOG00000006517	RIOK3	100	75.577	Ictidomys_tridecemlineatus
ENSXETG00000027370	riok3	99	75.769	ENSJJAG00000023689	Riok3	99	75.769	Jaculus_jaculus
ENSXETG00000027370	riok3	99	71.968	ENSKMAG00000007259	riok3	99	71.968	Kryptolebias_marmoratus
ENSXETG00000027370	riok3	99	71.089	ENSLBEG00000013689	riok3	99	71.089	Labrus_bergylta
ENSXETG00000027370	riok3	98	76.353	ENSLACG00000017326	RIOK3	99	75.195	Latimeria_chalumnae
ENSXETG00000027370	riok3	99	72.481	ENSLOCG00000001652	riok3	99	72.481	Lepisosteus_oculatus
ENSXETG00000027370	riok3	100	76.392	ENSLAFG00000001380	RIOK3	100	76.392	Loxodonta_africana
ENSXETG00000027370	riok3	99	76.255	ENSMMUG00000021478	RIOK3	98	78.670	Macaca_mulatta
ENSXETG00000027370	riok3	100	66.538	ENSMNEG00000041106	RIOK3	100	66.538	Macaca_nemestrina
ENSXETG00000027370	riok3	100	76.154	ENSMLEG00000028187	RIOK3	98	78.670	Mandrillus_leucophaeus
ENSXETG00000027370	riok3	99	71.400	ENSMAMG00000008502	riok3	99	71.400	Mastacembelus_armatus
ENSXETG00000027370	riok3	99	72.211	ENSMZEG00005020212	riok3	99	72.211	Maylandia_zebra
ENSXETG00000027370	riok3	99	77.822	ENSMGAG00000010079	RIOK3	100	76.392	Meleagris_gallopavo
ENSXETG00000027370	riok3	99	76.641	ENSMAUG00000020527	Riok3	99	76.641	Mesocricetus_auratus
ENSXETG00000027370	riok3	100	76.346	ENSMICG00000009293	RIOK3	99	76.699	Microcebus_murinus
ENSXETG00000027370	riok3	99	75.728	ENSMOCG00000012114	Riok3	96	75.728	Microtus_ochrogaster
ENSXETG00000027370	riok3	95	68.737	ENSMMOG00000019204	riok3	99	68.944	Mola_mola
ENSXETG00000027370	riok3	100	76.392	ENSMODG00000021496	RIOK3	100	76.392	Monodelphis_domestica
ENSXETG00000027370	riok3	99	72.584	ENSMALG00000020848	riok3	99	72.584	Monopterus_albus
ENSXETG00000027370	riok3	99	76.893	MGP_CAROLIEiJ_G0022001	Riok3	99	76.893	Mus_caroli
ENSXETG00000027370	riok3	99	76.893	ENSMUSG00000024404	Riok3	95	89.655	Mus_musculus
ENSXETG00000027370	riok3	99	77.087	MGP_PahariEiJ_G0018739	Riok3	99	77.087	Mus_pahari
ENSXETG00000027370	riok3	100	76.154	ENSMPUG00000005772	RIOK3	100	76.154	Mustela_putorius_furo
ENSXETG00000027370	riok3	99	75.340	ENSMLUG00000007081	RIOK3	99	75.340	Myotis_lucifugus
ENSXETG00000027370	riok3	99	76.505	ENSNGAG00000011446	Riok3	99	76.505	Nannospalax_galili
ENSXETG00000027370	riok3	77	71.905	ENSNBRG00000016677	riok3	83	71.905	Neolamprologus_brichardi
ENSXETG00000027370	riok3	100	75.962	ENSNLEG00000006758	RIOK3	100	75.962	Nomascus_leucogenys
ENSXETG00000027370	riok3	100	76.008	ENSMEUG00000006292	RIOK3	100	76.008	Notamacropus_eugenii
ENSXETG00000027370	riok3	99	75.483	ENSOPRG00000004803	RIOK3	99	75.483	Ochotona_princeps
ENSXETG00000027370	riok3	99	75.629	ENSODEG00000006444	RIOK3	99	75.629	Octodon_degus
ENSXETG00000027370	riok3	96	72.032	ENSONIG00000013422	riok3	99	72.032	Oreochromis_niloticus
ENSXETG00000027370	riok3	95	78.323	ENSOANG00000012074	RIOK3	100	78.323	Ornithorhynchus_anatinus
ENSXETG00000027370	riok3	100	76.346	ENSOCUG00000016820	RIOK3	100	76.346	Oryctolagus_cuniculus
ENSXETG00000027370	riok3	99	71.230	ENSORLG00000003395	riok3	99	71.230	Oryzias_latipes
ENSXETG00000027370	riok3	99	71.429	ENSORLG00020000672	riok3	99	71.429	Oryzias_latipes_hni
ENSXETG00000027370	riok3	99	70.530	ENSORLG00015007372	riok3	99	70.530	Oryzias_latipes_hsok
ENSXETG00000027370	riok3	99	71.230	ENSOMEG00000001380	riok3	99	71.230	Oryzias_melastigma
ENSXETG00000027370	riok3	99	76.893	ENSOGAG00000014502	RIOK3	89	76.893	Otolemur_garnettii
ENSXETG00000027370	riok3	100	75.577	ENSOARG00000008042	RIOK3	100	75.577	Ovis_aries
ENSXETG00000027370	riok3	100	75.769	ENSPPAG00000030258	RIOK3	96	79.907	Pan_paniscus
ENSXETG00000027370	riok3	100	75.769	ENSPPRG00000023302	RIOK3	100	75.769	Panthera_pardus
ENSXETG00000027370	riok3	100	75.962	ENSPTIG00000000960	RIOK3	100	75.962	Panthera_tigris_altaica
ENSXETG00000027370	riok3	100	75.577	ENSPTRG00000009918	RIOK3	96	79.673	Pan_troglodytes
ENSXETG00000027370	riok3	100	76.154	ENSPANG00000011485	RIOK3	98	78.670	Papio_anubis
ENSXETG00000027370	riok3	99	73.161	ENSPKIG00000018297	riok3	99	73.161	Paramormyrops_kingsleyae
ENSXETG00000027370	riok3	100	76.538	ENSPSIG00000006250	RIOK3	100	76.538	Pelodiscus_sinensis
ENSXETG00000027370	riok3	93	70.208	ENSPMGG00000009414	riok3	99	70.417	Periophthalmus_magnuspinnatus
ENSXETG00000027370	riok3	99	76.744	ENSPEMG00000023794	Riok3	99	76.744	Peromyscus_maniculatus_bairdii
ENSXETG00000027370	riok3	83	71.395	ENSPMAG00000003258	riok3	96	71.395	Petromyzon_marinus
ENSXETG00000027370	riok3	94	79.210	ENSPCIG00000013991	RIOK3	100	79.046	Phascolarctos_cinereus
ENSXETG00000027370	riok3	97	71.515	ENSPFOG00000024127	riok3	99	70.553	Poecilia_formosa
ENSXETG00000027370	riok3	97	71.285	ENSPLAG00000004956	riok3	99	70.334	Poecilia_latipinna
ENSXETG00000027370	riok3	97	71.200	ENSPMEG00000020108	riok3	99	70.254	Poecilia_mexicana
ENSXETG00000027370	riok3	99	69.941	ENSPREG00000010010	riok3	99	69.941	Poecilia_reticulata
ENSXETG00000027370	riok3	100	70.385	ENSPPYG00000009062	RIOK3	100	70.385	Pongo_abelii
ENSXETG00000027370	riok3	77	77.154	ENSPCAG00000001021	RIOK3	76	77.154	Procavia_capensis
ENSXETG00000027370	riok3	100	76.154	ENSPCOG00000022631	RIOK3	97	79.398	Propithecus_coquereli
ENSXETG00000027370	riok3	100	63.077	ENSPVAG00000015817	RIOK3	100	63.077	Pteropus_vampyrus
ENSXETG00000027370	riok3	99	72.727	ENSPNYG00000003271	riok3	99	72.727	Pundamilia_nyererei
ENSXETG00000027370	riok3	99	71.316	ENSPNAG00000006213	riok3	99	71.316	Pygocentrus_nattereri
ENSXETG00000027370	riok3	99	76.255	ENSRNOG00000023376	Riok3	99	76.255	Rattus_norvegicus
ENSXETG00000027370	riok3	100	75.962	ENSRBIG00000035071	RIOK3	98	78.670	Rhinopithecus_bieti
ENSXETG00000027370	riok3	100	75.769	ENSRROG00000045710	RIOK3	98	78.440	Rhinopithecus_roxellana
ENSXETG00000027370	riok3	100	76.346	ENSSBOG00000034387	RIOK3	100	76.346	Saimiri_boliviensis_boliviensis
ENSXETG00000027370	riok3	100	76.775	ENSSHAG00000011854	RIOK3	100	76.775	Sarcophilus_harrisii
ENSXETG00000027370	riok3	99	71.146	ENSSFOG00015012912	riok3	99	71.146	Scleropages_formosus
ENSXETG00000027370	riok3	99	72.189	ENSSMAG00000011527	riok3	99	72.189	Scophthalmus_maximus
ENSXETG00000027370	riok3	99	72.781	ENSSDUG00000016018	riok3	99	72.781	Seriola_dumerili
ENSXETG00000027370	riok3	61	78.049	ENSSLDG00000022246	riok3	93	78.049	Seriola_lalandi_dorsalis
ENSXETG00000027370	riok3	87	75.735	ENSSARG00000010154	RIOK3	86	75.735	Sorex_araneus
ENSXETG00000027370	riok3	99	78.058	ENSSPUG00000015246	RIOK3	99	78.058	Sphenodon_punctatus
ENSXETG00000027370	riok3	99	72.079	ENSSPAG00000000601	riok3	98	72.079	Stegastes_partitus
ENSXETG00000027370	riok3	100	75.385	ENSSSCG00000029518	RIOK3	99	80.227	Sus_scrofa
ENSXETG00000027370	riok3	97	78.758	ENSTGUG00000010392	RIOK3	100	77.011	Taeniopygia_guttata
ENSXETG00000027370	riok3	99	71.203	ENSTRUG00000007055	riok3	99	71.203	Takifugu_rubripes
ENSXETG00000027370	riok3	94	65.625	ENSTNIG00000001855	riok3	99	65.833	Tetraodon_nigroviridis
ENSXETG00000027370	riok3	55	94.444	ENSTBEG00000015851	RIOK3	54	94.444	Tupaia_belangeri
ENSXETG00000027370	riok3	100	75.962	ENSTTRG00000008839	RIOK3	100	75.962	Tursiops_truncatus
ENSXETG00000027370	riok3	100	76.154	ENSUAMG00000018410	RIOK3	100	76.154	Ursus_americanus
ENSXETG00000027370	riok3	99	76.413	ENSUMAG00000020218	RIOK3	97	76.517	Ursus_maritimus
ENSXETG00000027370	riok3	100	76.154	ENSVPAG00000009034	RIOK3	100	76.154	Vicugna_pacos
ENSXETG00000027370	riok3	100	76.154	ENSVVUG00000003651	RIOK3	76	76.301	Vulpes_vulpes
ENSXETG00000027370	riok3	96	70.221	ENSXCOG00000001032	riok3	99	70.528	Xiphophorus_couchianus
ENSXETG00000027370	riok3	99	70.138	ENSXMAG00000012902	riok3	99	70.138	Xiphophorus_maculatus