EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Orthologs

Description

Ensembl ID: ENSXETG00000027491 (Gene tree)
Gene ID: -
Gene Symbol: dbr1
Alias: -
Full Name: Xenopus tropicalis debranching RNA lariats 1 (dbr1)%2C mRNA.
Gene Type: protein_coding
Species: Xenopus_tropicalis
Status: putative
Strand: Plus strand
Length: 12414 bases
Position: chrGL172854.1:1115716-1128129
Accession: NM_203616
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSXETP00000057335	DBR1	PF05011.13	5e-32	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSXETT00000057335	-	2112	XM_012970236	ENSXETP00000057335	534 (aa)	XP_012825690	Q6P886

Gene Model

Click here to download ENSXETG00000027491's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSXETG00000027491's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSXETG00000027491	dbr1	99	64.860	ENSG00000138231	DBR1	94	75.676	Homo_sapiens
ENSXETG00000027491	dbr1	100	60.579	ENSAPOG00000004318	dbr1	99	60.909	Acanthochromis_polyacanthus
ENSXETG00000027491	dbr1	98	63.977	ENSAMEG00000006272	DBR1	99	63.519	Ailuropoda_melanoleuca
ENSXETG00000027491	dbr1	99	59.099	ENSACIG00000020512	dbr1	99	59.605	Amphilophus_citrinellus
ENSXETG00000027491	dbr1	100	60.727	ENSAOCG00000008060	dbr1	99	60.545	Amphiprion_ocellaris
ENSXETG00000027491	dbr1	100	59.855	ENSAPEG00000021944	dbr1	99	59.855	Amphiprion_percula
ENSXETG00000027491	dbr1	99	57.979	ENSATEG00000019673	dbr1	99	59.150	Anabas_testudineus
ENSXETG00000027491	dbr1	99	64.510	ENSACAG00000016760	DBR1	99	63.771	Anolis_carolinensis
ENSXETG00000027491	dbr1	98	64.916	ENSANAG00000028952	DBR1	99	64.706	Aotus_nancymaae
ENSXETG00000027491	dbr1	99	58.707	ENSACLG00000024027	dbr1	99	59.066	Astatotilapia_calliptera
ENSXETG00000027491	dbr1	100	56.401	ENSAMXG00000030736	dbr1	99	58.494	Astyanax_mexicanus
ENSXETG00000027491	dbr1	99	64.954	ENSBTAG00000019949	DBR1	99	64.954	Bos_taurus
ENSXETG00000027491	dbr1	73	43.171	WBGene00000937	dbr-1	80	43.171	Caenorhabditis_elegans
ENSXETG00000027491	dbr1	99	64.607	ENSCJAG00000002433	DBR1	99	64.391	Callithrix_jacchus
ENSXETG00000027491	dbr1	99	63.806	ENSCAFG00000007501	DBR1	99	63.536	Canis_familiaris
ENSXETG00000027491	dbr1	99	63.806	ENSCAFG00020008060	DBR1	99	63.536	Canis_lupus_dingo
ENSXETG00000027491	dbr1	99	64.771	ENSCHIG00000026937	DBR1	99	64.771	Capra_hircus
ENSXETG00000027491	dbr1	99	63.187	ENSTSYG00000005317	DBR1	99	63.553	Carlito_syrichta
ENSXETG00000027491	dbr1	99	59.738	ENSCPOG00000006179	DBR1	99	59.704	Cavia_porcellus
ENSXETG00000027491	dbr1	99	64.925	ENSCCAG00000025708	DBR1	99	65.193	Cebus_capucinus
ENSXETG00000027491	dbr1	98	64.098	ENSCATG00000032054	DBR1	99	64.522	Cercocebus_atys
ENSXETG00000027491	dbr1	99	62.921	ENSCLAG00000001800	DBR1	99	62.662	Chinchilla_lanigera
ENSXETG00000027491	dbr1	98	63.722	ENSCSAG00000010977	DBR1	99	63.971	Chlorocebus_sabaeus
ENSXETG00000027491	dbr1	89	64.706	ENSCHOG00000000730	DBR1	89	64.706	Choloepus_hoffmanni
ENSXETG00000027491	dbr1	100	69.145	ENSCPBG00000007633	DBR1	90	69.145	Chrysemys_picta_bellii
ENSXETG00000027491	dbr1	82	55.809	ENSCING00000011388	-	98	56.019	Ciona_intestinalis
ENSXETG00000027491	dbr1	71	59.367	ENSCSAVG00000007545	-	100	59.367	Ciona_savignyi
ENSXETG00000027491	dbr1	99	64.804	ENSCANG00000024237	DBR1	99	64.825	Colobus_angolensis_palliatus
ENSXETG00000027491	dbr1	100	63.736	ENSCGRG00001018497	Dbr1	99	63.736	Cricetulus_griseus_chok1gshd
ENSXETG00000027491	dbr1	100	58.974	ENSCGRG00000005958	Dbr1	99	58.974	Cricetulus_griseus_crigri
ENSXETG00000027491	dbr1	100	58.275	ENSCSEG00000002813	dbr1	99	59.788	Cynoglossus_semilaevis
ENSXETG00000027491	dbr1	99	55.476	ENSCVAG00000019969	dbr1	99	57.549	Cyprinodon_variegatus
ENSXETG00000027491	dbr1	99	55.497	ENSDARG00000056923	dbr1	99	55.846	Danio_rerio
ENSXETG00000027491	dbr1	99	63.993	ENSDNOG00000043630	DBR1	99	63.603	Dasypus_novemcinctus
ENSXETG00000027491	dbr1	71	51.551	FBgn0035838	ldbr	100	42.808	Drosophila_melanogaster
ENSXETG00000027491	dbr1	77	82.090	ENSETEG00000011830	DBR1	79	82.090	Echinops_telfairi
ENSXETG00000027491	dbr1	99	45.679	ENSEBUG00000007494	dbr1	99	45.679	Eptatretus_burgeri
ENSXETG00000027491	dbr1	99	63.993	ENSEASG00005003788	DBR1	99	64.273	Equus_asinus_asinus
ENSXETG00000027491	dbr1	99	64.179	ENSECAG00000013920	DBR1	99	64.457	Equus_caballus
ENSXETG00000027491	dbr1	99	55.617	ENSEEUG00000007059	DBR1	99	55.617	Erinaceus_europaeus
ENSXETG00000027491	dbr1	100	57.603	ENSELUG00000005587	dbr1	99	58.951	Esox_lucius
ENSXETG00000027491	dbr1	99	63.806	ENSFCAG00000002229	DBR1	99	63.720	Felis_catus
ENSXETG00000027491	dbr1	99	67.844	ENSFALG00000013467	DBR1	85	67.897	Ficedula_albicollis
ENSXETG00000027491	dbr1	99	62.547	ENSFDAG00000009524	DBR1	99	62.177	Fukomys_damarensis
ENSXETG00000027491	dbr1	99	57.904	ENSFHEG00000001743	dbr1	99	58.451	Fundulus_heteroclitus
ENSXETG00000027491	dbr1	100	58.094	ENSGMOG00000006925	dbr1	100	58.094	Gadus_morhua
ENSXETG00000027491	dbr1	100	62.268	ENSGALG00000043797	DBR1	99	61.993	Gallus_gallus
ENSXETG00000027491	dbr1	99	60.367	ENSGAFG00000001046	dbr1	99	60.367	Gambusia_affinis
ENSXETG00000027491	dbr1	100	57.522	ENSGACG00000009122	dbr1	100	58.834	Gasterosteus_aculeatus
ENSXETG00000027491	dbr1	99	69.460	ENSGAGG00000001244	DBR1	100	69.460	Gopherus_agassizii
ENSXETG00000027491	dbr1	99	60.000	ENSGGOG00000004564	DBR1	99	60.294	Gorilla_gorilla
ENSXETG00000027491	dbr1	99	58.707	ENSHBUG00000000882	dbr1	99	59.066	Haplochromis_burtoni
ENSXETG00000027491	dbr1	99	62.970	ENSHGLG00000014529	Dbr1	99	62.593	Heterocephalus_glaber_female
ENSXETG00000027491	dbr1	99	62.970	ENSHGLG00100013202	Dbr1	99	62.593	Heterocephalus_glaber_male
ENSXETG00000027491	dbr1	100	58.425	ENSHCOG00000004179	dbr1	100	58.425	Hippocampus_comes
ENSXETG00000027491	dbr1	99	55.709	ENSIPUG00000023749	dbr1	99	57.043	Ictalurus_punctatus
ENSXETG00000027491	dbr1	99	63.941	ENSSTOG00000007122	DBR1	99	63.787	Ictidomys_tridecemlineatus
ENSXETG00000027491	dbr1	100	64.168	ENSJJAG00000017080	Dbr1	99	64.168	Jaculus_jaculus
ENSXETG00000027491	dbr1	100	58.877	ENSKMAG00000004869	dbr1	99	58.228	Kryptolebias_marmoratus
ENSXETG00000027491	dbr1	99	59.612	ENSLBEG00000021307	dbr1	99	60.461	Labrus_bergylta
ENSXETG00000027491	dbr1	100	73.297	ENSLACG00000005547	DBR1	100	73.297	Latimeria_chalumnae
ENSXETG00000027491	dbr1	99	58.554	ENSLOCG00000004160	dbr1	99	58.875	Lepisosteus_oculatus
ENSXETG00000027491	dbr1	99	62.799	ENSLAFG00000005827	DBR1	99	62.615	Loxodonta_africana
ENSXETG00000027491	dbr1	98	63.910	ENSMFAG00000043642	DBR1	99	64.338	Macaca_fascicularis
ENSXETG00000027491	dbr1	98	63.910	ENSMMUG00000021284	DBR1	99	64.338	Macaca_mulatta
ENSXETG00000027491	dbr1	98	63.910	ENSMNEG00000041740	DBR1	99	64.338	Macaca_nemestrina
ENSXETG00000027491	dbr1	87	53.165	ENSMLEG00000034542	DBR1	95	53.909	Mandrillus_leucophaeus
ENSXETG00000027491	dbr1	100	59.011	ENSMAMG00000012205	dbr1	99	59.011	Mastacembelus_armatus
ENSXETG00000027491	dbr1	99	58.707	ENSMZEG00005021338	dbr1	99	59.066	Maylandia_zebra
ENSXETG00000027491	dbr1	80	67.517	ENSMGAG00000002142	DBR1	99	67.126	Meleagris_gallopavo
ENSXETG00000027491	dbr1	100	64.273	ENSMAUG00000010037	Dbr1	99	64.273	Mesocricetus_auratus
ENSXETG00000027491	dbr1	99	64.739	ENSMICG00000049533	DBR1	99	64.522	Microcebus_murinus
ENSXETG00000027491	dbr1	99	64.259	ENSMOCG00000018746	Dbr1	99	63.822	Microtus_ochrogaster
ENSXETG00000027491	dbr1	99	59.043	ENSMMOG00000000719	dbr1	99	58.929	Mola_mola
ENSXETG00000027491	dbr1	99	65.625	ENSMODG00000018554	DBR1	99	65.074	Monodelphis_domestica
ENSXETG00000027491	dbr1	99	58.025	ENSMALG00000022283	dbr1	97	57.672	Monopterus_albus
ENSXETG00000027491	dbr1	99	63.536	MGP_CAROLIEiJ_G0032564	Dbr1	98	79.012	Mus_caroli
ENSXETG00000027491	dbr1	99	63.620	ENSMUSG00000032469	Dbr1	98	79.012	Mus_musculus
ENSXETG00000027491	dbr1	99	64.022	MGP_PahariEiJ_G0015433	Dbr1	98	79.012	Mus_pahari
ENSXETG00000027491	dbr1	99	64.273	MGP_SPRETEiJ_G0033708	Dbr1	98	79.012	Mus_spretus
ENSXETG00000027491	dbr1	99	63.433	ENSMPUG00000009230	DBR1	99	62.983	Mustela_putorius_furo
ENSXETG00000027491	dbr1	99	63.569	ENSMLUG00000026117	DBR1	99	63.303	Myotis_lucifugus
ENSXETG00000027491	dbr1	99	64.022	ENSNGAG00000003518	Dbr1	99	64.022	Nannospalax_galili
ENSXETG00000027491	dbr1	99	58.348	ENSNBRG00000016318	dbr1	99	59.066	Neolamprologus_brichardi
ENSXETG00000027491	dbr1	99	64.246	ENSNLEG00000032263	DBR1	98	64.154	Nomascus_leucogenys
ENSXETG00000027491	dbr1	99	66.176	ENSMEUG00000009188	DBR1	100	65.809	Notamacropus_eugenii
ENSXETG00000027491	dbr1	93	55.357	ENSOPRG00000016510	DBR1	99	55.357	Ochotona_princeps
ENSXETG00000027491	dbr1	100	63.168	ENSODEG00000018178	DBR1	99	63.168	Octodon_degus
ENSXETG00000027491	dbr1	99	58.244	ENSONIG00000013801	dbr1	99	58.571	Oreochromis_niloticus
ENSXETG00000027491	dbr1	88	64.286	ENSOANG00000007783	DBR1	99	64.898	Ornithorhynchus_anatinus
ENSXETG00000027491	dbr1	93	63.976	ENSOCUG00000015129	DBR1	89	64.147	Oryctolagus_cuniculus
ENSXETG00000027491	dbr1	99	59.218	ENSORLG00015001112	dbr1	99	59.777	Oryzias_latipes_hsok
ENSXETG00000027491	dbr1	99	59.475	ENSOMEG00000000857	dbr1	99	59.475	Oryzias_melastigma
ENSXETG00000027491	dbr1	98	63.722	ENSOGAG00000033095	DBR1	99	63.720	Otolemur_garnettii
ENSXETG00000027491	dbr1	99	63.670	ENSOARG00000007589	DBR1	99	63.670	Ovis_aries
ENSXETG00000027491	dbr1	99	64.486	ENSPPAG00000031137	DBR1	99	64.706	Pan_paniscus
ENSXETG00000027491	dbr1	99	63.993	ENSPPRG00000013629	DBR1	99	63.904	Panthera_pardus
ENSXETG00000027491	dbr1	96	63.550	ENSPTIG00000012674	DBR1	97	63.089	Panthera_tigris_altaica
ENSXETG00000027491	dbr1	99	64.299	ENSPTRG00000015441	DBR1	99	64.522	Pan_troglodytes
ENSXETG00000027491	dbr1	98	64.098	ENSPANG00000012664	DBR1	99	64.088	Papio_anubis
ENSXETG00000027491	dbr1	100	59.578	ENSPKIG00000000310	dbr1	99	59.930	Paramormyrops_kingsleyae
ENSXETG00000027491	dbr1	87	68.790	ENSPSIG00000015486	DBR1	99	68.577	Pelodiscus_sinensis
ENSXETG00000027491	dbr1	99	64.695	ENSPEMG00000020602	Dbr1	98	64.481	Peromyscus_maniculatus_bairdii
ENSXETG00000027491	dbr1	71	56.579	ENSPMAG00000008620	dbr1	100	56.579	Petromyzon_marinus
ENSXETG00000027491	dbr1	99	65.625	ENSPCIG00000006494	DBR1	99	64.890	Phascolarctos_cinereus
ENSXETG00000027491	dbr1	69	50.132	ENSPLAG00000002421	-	99	50.132	Poecilia_latipinna
ENSXETG00000027491	dbr1	99	60.183	ENSPLAG00000011665	dbr1	99	60.183	Poecilia_latipinna
ENSXETG00000027491	dbr1	70	48.571	ENSPMEG00000020884	-	94	48.571	Poecilia_mexicana
ENSXETG00000027491	dbr1	99	59.158	ENSPMEG00000010080	dbr1	99	59.410	Poecilia_mexicana
ENSXETG00000027491	dbr1	99	59.218	ENSPREG00000020157	dbr1	99	59.218	Poecilia_reticulata
ENSXETG00000027491	dbr1	99	64.432	ENSPPYG00000014139	DBR1	99	64.706	Pongo_abelii
ENSXETG00000027491	dbr1	73	71.208	ENSPCAG00000012956	DBR1	99	71.208	Procavia_capensis
ENSXETG00000027491	dbr1	99	64.179	ENSPCOG00000016894	DBR1	99	63.787	Propithecus_coquereli
ENSXETG00000027491	dbr1	99	56.716	ENSPVAG00000007713	DBR1	99	56.722	Pteropus_vampyrus
ENSXETG00000027491	dbr1	99	57.885	ENSPNYG00000015453	dbr1	99	58.423	Pundamilia_nyererei
ENSXETG00000027491	dbr1	99	57.368	ENSPNAG00000025595	dbr1	99	58.144	Pygocentrus_nattereri
ENSXETG00000027491	dbr1	99	63.838	ENSRNOG00000014588	Dbr1	99	63.838	Rattus_norvegicus
ENSXETG00000027491	dbr1	99	64.366	ENSRBIG00000045002	DBR1	99	64.522	Rhinopithecus_bieti
ENSXETG00000027491	dbr1	99	64.299	ENSRROG00000044819	DBR1	99	64.522	Rhinopithecus_roxellana
ENSXETG00000027491	dbr1	51	39.185	YKL149C	DBR1	78	39.185	Saccharomyces_cerevisiae
ENSXETG00000027491	dbr1	99	65.112	ENSSBOG00000032048	DBR1	99	65.257	Saimiri_boliviensis_boliviensis
ENSXETG00000027491	dbr1	99	67.647	ENSSHAG00000006752	DBR1	99	66.912	Sarcophilus_harrisii
ENSXETG00000027491	dbr1	99	59.191	ENSSFOG00015011410	dbr1	99	59.559	Scleropages_formosus
ENSXETG00000027491	dbr1	99	57.295	ENSSMAG00000016078	dbr1	99	59.710	Scophthalmus_maximus
ENSXETG00000027491	dbr1	99	58.217	ENSSDUG00000017849	dbr1	99	58.699	Seriola_dumerili
ENSXETG00000027491	dbr1	99	57.193	ENSSLDG00000019891	dbr1	99	57.848	Seriola_lalandi_dorsalis
ENSXETG00000027491	dbr1	100	58.226	ENSSARG00000009558	-	99	58.178	Sorex_araneus
ENSXETG00000027491	dbr1	51	88.000	ENSSARG00000003148	-	74	88.000	Sorex_araneus
ENSXETG00000027491	dbr1	89	66.250	ENSSPUG00000004724	DBR1	92	66.042	Sphenodon_punctatus
ENSXETG00000027491	dbr1	100	61.413	ENSSPAG00000016892	dbr1	99	61.413	Stegastes_partitus
ENSXETG00000027491	dbr1	99	63.956	ENSSSCG00000031098	DBR1	99	63.956	Sus_scrofa
ENSXETG00000027491	dbr1	96	66.346	ENSTGUG00000007073	DBR1	99	66.031	Taeniopygia_guttata
ENSXETG00000027491	dbr1	100	58.919	ENSTRUG00000021594	dbr1	98	58.919	Takifugu_rubripes
ENSXETG00000027491	dbr1	100	58.834	ENSTNIG00000006710	dbr1	100	59.420	Tetraodon_nigroviridis
ENSXETG00000027491	dbr1	99	65.074	ENSTTRG00000004020	DBR1	99	64.890	Tursiops_truncatus
ENSXETG00000027491	dbr1	99	64.273	ENSUAMG00000004639	DBR1	99	64.273	Ursus_americanus
ENSXETG00000027491	dbr1	99	64.179	ENSUMAG00000015012	DBR1	99	63.720	Ursus_maritimus
ENSXETG00000027491	dbr1	99	59.484	ENSVPAG00000011711	DBR1	99	59.853	Vicugna_pacos
ENSXETG00000027491	dbr1	99	63.619	ENSVVUG00000026604	DBR1	99	63.352	Vulpes_vulpes
ENSXETG00000027491	dbr1	99	59.555	ENSXCOG00000018078	dbr1	99	59.555	Xiphophorus_couchianus
ENSXETG00000027491	dbr1	99	59.480	ENSXMAG00000007311	dbr1	99	59.480	Xiphophorus_maculatus