EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Orthologs

Description

Ensembl ID: ENSXETG00000027597 (Gene tree)
Gene ID: -
Gene Symbol: mrps18c
Alias: -
Full Name: mitochondrial ribosomal protein S18C
Gene Type: protein_coding
Species: Xenopus_tropicalis
Status: putative
Strand: Minus strand
Length: 4116 bases
Position: chrGL172758.1:454313-458428
Accession: XB-GENE-952459
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSXETP00000057505	Ribosomal_S18	PF01084.20	9.8e-23	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSXETT00000057505	-	714	-	ENSXETP00000057505	131 (aa)	-	Q28GJ7

Gene Model

Click here to download ENSXETG00000027597's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSXETG00000027597's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSXETG00000027597	mrps18c	69	72.222	ENSAPOG00000019045	mrps18c	70	72.222	Acanthochromis_polyacanthus
ENSXETG00000027597	mrps18c	63	74.699	ENSACIG00000020253	mrps18c	82	74.699	Amphilophus_citrinellus
ENSXETG00000027597	mrps18c	98	55.303	ENSAOCG00000014338	mrps18c	95	55.303	Amphiprion_ocellaris
ENSXETG00000027597	mrps18c	69	70.000	ENSAPEG00000022956	mrps18c	70	70.000	Amphiprion_percula
ENSXETG00000027597	mrps18c	62	74.074	ENSAPEG00000023068	-	77	73.171	Amphiprion_percula
ENSXETG00000027597	mrps18c	96	57.143	ENSATEG00000023417	mrps18c	91	57.143	Anabas_testudineus
ENSXETG00000027597	mrps18c	66	70.930	ENSAPLG00000012544	-	83	70.930	Anas_platyrhynchos
ENSXETG00000027597	mrps18c	63	74.699	ENSACLG00000010521	mrps18c	81	74.699	Astatotilapia_calliptera
ENSXETG00000027597	mrps18c	66	72.414	ENSAMXG00000012238	mrps18c	88	72.414	Astyanax_mexicanus
ENSXETG00000027597	mrps18c	83	64.286	ENSCPBG00000007783	-	69	64.286	Chrysemys_picta_bellii
ENSXETG00000027597	mrps18c	65	64.706	ENSCSEG00000000711	mrps18c	60	64.706	Cynoglossus_semilaevis
ENSXETG00000027597	mrps18c	64	71.429	ENSCVAG00000020169	mrps18c	66	71.429	Cyprinodon_variegatus
ENSXETG00000027597	mrps18c	68	71.910	ENSDARG00000069624	mrps18c	65	71.910	Danio_rerio
ENSXETG00000027597	mrps18c	71	69.892	ENSELUG00000024603	mrps18c	70	69.892	Esox_lucius
ENSXETG00000027597	mrps18c	89	56.897	ENSFHEG00000015550	mrps18c	79	56.897	Fundulus_heteroclitus
ENSXETG00000027597	mrps18c	89	56.897	ENSFHEG00000018752	-	83	56.897	Fundulus_heteroclitus
ENSXETG00000027597	mrps18c	73	67.708	ENSGALG00000023191	MRPS18C	67	67.708	Gallus_gallus
ENSXETG00000027597	mrps18c	69	65.556	ENSGAFG00000008048	mrps18c	58	65.556	Gambusia_affinis
ENSXETG00000027597	mrps18c	99	56.934	ENSGAGG00000015144	-	96	56.934	Gopherus_agassizii
ENSXETG00000027597	mrps18c	89	60.684	ENSHBUG00000002008	mrps18c	84	60.684	Haplochromis_burtoni
ENSXETG00000027597	mrps18c	71	68.817	ENSHCOG00000013161	mrps18c	70	68.817	Hippocampus_comes
ENSXETG00000027597	mrps18c	66	75.862	ENSIPUG00000003783	mrps18c	84	75.862	Ictalurus_punctatus
ENSXETG00000027597	mrps18c	68	69.663	ENSKMAG00000016467	mrps18c	70	69.663	Kryptolebias_marmoratus
ENSXETG00000027597	mrps18c	69	73.333	ENSLBEG00000019174	mrps18c	69	73.333	Labrus_bergylta
ENSXETG00000027597	mrps18c	69	73.333	ENSLBEG00000021861	mrps18c	69	73.333	Labrus_bergylta
ENSXETG00000027597	mrps18c	78	72.115	ENSLACG00000011243	mrps18c	81	72.115	Latimeria_chalumnae
ENSXETG00000027597	mrps18c	81	70.755	ENSLOCG00000012115	mrps18c	79	70.755	Lepisosteus_oculatus
ENSXETG00000027597	mrps18c	68	73.034	ENSMAMG00000012386	mrps18c	66	73.034	Mastacembelus_armatus
ENSXETG00000027597	mrps18c	89	60.684	ENSMZEG00005023278	mrps18c	84	60.684	Maylandia_zebra
ENSXETG00000027597	mrps18c	64	72.619	ENSMMOG00000011316	mrps18c	64	72.619	Mola_mola
ENSXETG00000027597	mrps18c	89	60.684	ENSNBRG00000006182	mrps18c	84	60.684	Neolamprologus_brichardi
ENSXETG00000027597	mrps18c	66	80.233	ENSMEUG00000010972	-	68	80.233	Notamacropus_eugenii
ENSXETG00000027597	mrps18c	89	59.829	ENSONIG00000012527	mrps18c	83	72.619	Oreochromis_niloticus
ENSXETG00000027597	mrps18c	73	67.708	ENSORLG00015006869	mrps18c	74	67.708	Oryzias_latipes_hsok
ENSXETG00000027597	mrps18c	64	72.619	ENSOMEG00000005009	mrps18c	81	72.619	Oryzias_melastigma
ENSXETG00000027597	mrps18c	91	62.810	ENSPKIG00000021736	mrps18c	83	62.810	Paramormyrops_kingsleyae
ENSXETG00000027597	mrps18c	65	74.118	ENSPMGG00000002991	mrps18c	86	74.118	Periophthalmus_magnuspinnatus
ENSXETG00000027597	mrps18c	69	63.333	ENSPFOG00000002351	mrps18c	58	63.333	Poecilia_formosa
ENSXETG00000027597	mrps18c	68	64.045	ENSPLAG00000015187	mrps18c	70	64.045	Poecilia_latipinna
ENSXETG00000027597	mrps18c	69	63.333	ENSPMEG00000014488	mrps18c	58	63.333	Poecilia_mexicana
ENSXETG00000027597	mrps18c	60	69.231	ENSPREG00000012593	mrps18c	80	69.231	Poecilia_reticulata
ENSXETG00000027597	mrps18c	89	59.829	ENSPNYG00000010654	mrps18c	84	59.829	Pundamilia_nyererei
ENSXETG00000027597	mrps18c	91	56.667	ENSPNAG00000009350	mrps18c	82	69.318	Pygocentrus_nattereri
ENSXETG00000027597	mrps18c	85	63.393	ENSSFOG00015019444	mrps18c	76	63.393	Scleropages_formosus
ENSXETG00000027597	mrps18c	98	54.264	ENSSDUG00000015676	mrps18c	93	54.264	Seriola_dumerili
ENSXETG00000027597	mrps18c	64	71.429	ENSSLDG00000002034	mrps18c	84	53.125	Seriola_lalandi_dorsalis
ENSXETG00000027597	mrps18c	69	71.111	ENSSPUG00000013990	-	66	71.111	Sphenodon_punctatus
ENSXETG00000027597	mrps18c	98	55.303	ENSSPAG00000008687	mrps18c	95	55.303	Stegastes_partitus
ENSXETG00000027597	mrps18c	64	71.429	ENSTRUG00000024403	mrps18c	65	71.429	Takifugu_rubripes
ENSXETG00000027597	mrps18c	99	54.135	ENSTNIG00000005674	mrps18c	96	54.135	Tetraodon_nigroviridis
ENSXETG00000027597	mrps18c	85	54.464	ENSXCOG00000016208	mrps18c	84	69.048	Xiphophorus_couchianus
ENSXETG00000027597	mrps18c	69	64.444	ENSXMAG00000012555	mrps18c	58	64.444	Xiphophorus_maculatus